Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10l16f
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.8  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   3.7  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.9  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +2

Query: 581 FVYGLSMMSVILMYFLL 631
           ++YG+  +S+++ +FLL
Sbjct: 120 YIYGIIFLSILIPHFLL 136


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +2

Query: 581 FVYGLSMMSVILMYFLL 631
           ++YG+  +S+++ +FLL
Sbjct: 120 YIYGIIFLSILIPHFLL 136


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 581 TQNGLYCLIEKGKLPRLGRML 519
           T+N L C++EKGK    G  L
Sbjct: 39  TKNYLDCILEKGKCTPEGEEL 59


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 87  LRQDCFTASSW 119
           L +DC TASSW
Sbjct: 27  LYRDCTTASSW 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,748
Number of Sequences: 336
Number of extensions: 3514
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)