Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10l16f
         (635 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094949-1|AAM11302.1|  264|Drosophila melanogaster RH67967p pro...    52   9e-07
AE014134-2270|AAF53235.1|  264|Drosophila melanogaster CG12404-P...    52   9e-07
AE014296-155|ABC66121.2|  355|Drosophila melanogaster CG34057-PA...    31   1.3  
AE014296-154|ABC66120.1|  344|Drosophila melanogaster CG34057-PB...    31   1.3  

>AY094949-1|AAM11302.1|  264|Drosophila melanogaster RH67967p
           protein.
          Length = 264

 Score = 51.6 bits (118), Expect = 9e-07
 Identities = 29/72 (40%), Positives = 39/72 (54%)
 Frame = +2

Query: 419 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLS 598
           I +KTLAVLNP  G  +      +L+DTD+AGP+            SG K  F ++YG+ 
Sbjct: 109 IFQKTLAVLNPLRGTDQQ-----ILQDTDMAGPLVFCLTLGGFLLLSG-KVTFSYIYGIG 162

Query: 599 MMSVILMYFLLS 634
           +M  I  Y LLS
Sbjct: 163 VMGCIFFYCLLS 174


>AE014134-2270|AAF53235.1|  264|Drosophila melanogaster CG12404-PA
           protein.
          Length = 264

 Score = 51.6 bits (118), Expect = 9e-07
 Identities = 29/72 (40%), Positives = 39/72 (54%)
 Frame = +2

Query: 419 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPIXXXXXXXXXXXXSGNKAHFGFVYGLS 598
           I +KTLAVLNP  G  +      +L+DTD+AGP+            SG K  F ++YG+ 
Sbjct: 109 IFQKTLAVLNPLRGTDQQ-----ILQDTDMAGPLVFCLTLGGFLLLSG-KVTFSYIYGIG 162

Query: 599 MMSVILMYFLLS 634
           +M  I  Y LLS
Sbjct: 163 VMGCIFFYCLLS 174


>AE014296-155|ABC66121.2|  355|Drosophila melanogaster CG34057-PA,
           isoform A protein.
          Length = 355

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
 Frame = -1

Query: 314 DCSIGCCLLEL-CLASDQRNSS-------VDPWEKFENLKSGQLFQKYLMNQKNNSDCRF 159
           D  IG CL ++  +A D R+         V+P+  F  + S    + Y  ++ N SDC  
Sbjct: 235 DVQIGHCLQDVGVIAGDTRDFQGHHRFLPVNPFTVFPTILSNSWLEGYFFHKPNKSDCCA 294

Query: 158 AFAMHIHW 135
           A A+  H+
Sbjct: 295 ASAISFHY 302


>AE014296-154|ABC66120.1|  344|Drosophila melanogaster CG34057-PB,
           isoform B protein.
          Length = 344

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
 Frame = -1

Query: 314 DCSIGCCLLEL-CLASDQRNSS-------VDPWEKFENLKSGQLFQKYLMNQKNNSDCRF 159
           D  IG CL ++  +A D R+         V+P+  F  + S    + Y  ++ N SDC  
Sbjct: 224 DVQIGHCLQDVGVIAGDTRDFQGHHRFLPVNPFTVFPTILSNSWLEGYFFHKPNKSDCCA 283

Query: 158 AFAMHIHW 135
           A A+  H+
Sbjct: 284 ASAISFHY 291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,185,073
Number of Sequences: 53049
Number of extensions: 527698
Number of successful extensions: 1271
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)