Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10l11r
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    25   0.65 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.0  

>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 84  NGYLMPVFTRNIPDPCFTSL 143
           N  ++ V+TRNIPD   TSL
Sbjct: 53  NCLVLNVYTRNIPDGIHTSL 72


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 77  VMPTKLKTKFSVMTNKISFYINLL 6
           + PT     FS+   K +FY+N++
Sbjct: 307 IFPTHFYCAFSLYPLKSTFYLNVV 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,910
Number of Sequences: 336
Number of extensions: 4079
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)