Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10l10r
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   3.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.9  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   6.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   6.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   6.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.6  

>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 683 PDTKGVPLIADMSSNIMSKKVDVSKFGVIYAGAQKNI-GTSG 561
           P TK   LI    S +  K +  + FGV Y G    I G+SG
Sbjct: 73  PKTKFFNLIKRKDSPVQKKHILKNVFGVAYPGELLAILGSSG 114


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 757 TLIPMLHMYIFVLMKQYMVLNLTSYQ 680
           T IPML+ Y+F ++   +V+ L  Y+
Sbjct: 84  TSIPMLYAYVFYVVTTVLVV-LVGYE 108


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 757 TLIPMLHMYIFVLMKQYMVLNLTSYQ 680
           T IPML+ Y+F ++   +V+ L  Y+
Sbjct: 84  TSIPMLYAYVFYVVTTVLVV-LVGYE 108


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 757 TLIPMLHMYIFVLMKQYMVLNLTSYQ 680
           T IPML+ Y+F ++   +V+ L  Y+
Sbjct: 84  TSIPMLYAYVFYVVTTVLVV-LVGYE 108


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 353 RLSLLPIETFLLILHSFESIVILDPLY 433
           RLS+LP++ FL I     +I  L  +Y
Sbjct: 250 RLSILPVDEFLQISEEVANIWGLKKVY 276


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 604 PNFETSTFFDIMFEDISAIKGT 669
           P F  + FFDI    I ++ GT
Sbjct: 318 PKFSAANFFDIERSTILSVLGT 339


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 452 PPMFAIYIMGRVLQ 411
           P +F IY+ GRV++
Sbjct: 239 PALFVIYLCGRVME 252


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 166 PTSLCPFS*ISPKVSAPFKNSFSKASS 246
           PT  C  +  SP  S   ++SFS ASS
Sbjct: 192 PTPTCSEASSSPTPSHSSESSFSAASS 218


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -2

Query: 410 WIQRNGGLEGMSQLATKKASLIYN 339
           W+  +GG+  M+  +T  +SL ++
Sbjct: 198 WLDMSGGMHQMANYSTDYSSLTHS 221


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = +2

Query: 239 HHHQGNQF*MAHSFYCEHF*LQGHNKNH 322
           HHH G+     H     H    G  K+H
Sbjct: 323 HHHAGHHIHAQHHVVNHHVAANGSLKHH 350


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 344 YNTIEQSNGFYYAP 303
           YN  E S  FYY P
Sbjct: 56  YNVSEISENFYYLP 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,553
Number of Sequences: 336
Number of extensions: 4799
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)