BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10l10r
(798 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006840-1|AAP35486.1| 370|Homo sapiens phosphoserine aminotran... 304 2e-82
BC018129-1|AAH18129.1| 370|Homo sapiens phosphoserine aminotran... 304 2e-82
BC016645-1|AAH16645.1| 370|Homo sapiens phosphoserine aminotran... 304 2e-82
BC004863-1|AAH04863.1| 370|Homo sapiens phosphoserine aminotran... 304 2e-82
BC000971-1|AAH00971.1| 370|Homo sapiens phosphoserine aminotran... 304 2e-82
AY131232-1|AAN71736.1| 370|Homo sapiens phosphoserine aminotran... 304 2e-82
AL353594-1|CAI16882.1| 370|Homo sapiens phosphoserine aminotran... 304 2e-82
AL353594-2|CAI16883.1| 324|Homo sapiens phosphoserine aminotran... 211 3e-54
AF113132-1|AAD42052.1| 324|Homo sapiens phosphoserine aminotran... 211 3e-54
>BT006840-1|AAP35486.1| 370|Homo sapiens phosphoserine
aminotransferase protein.
Length = 370
Score = 304 bits (747), Expect = 2e-82
Identities = 139/236 (58%), Positives = 178/236 (75%), Gaps = 1/236 (0%)
Frame = -2
Query: 782 RLPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKFG 603
++PD + WNL+P+ASYV+ C NET+HGVEFDFIPD KG L+ DMSSN +SK VDVSKFG
Sbjct: 133 KIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFG 192
Query: 602 VIYAGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMG 423
VI+AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG
Sbjct: 193 VIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMG 252
Query: 422 RVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPG 246
VL+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFRIG G
Sbjct: 253 LVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKG 312
Query: 245 DDALEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 78
DDALEK FL A L ++ LKGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 313 DDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>BC018129-1|AAH18129.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 304 bits (747), Expect = 2e-82
Identities = 139/236 (58%), Positives = 178/236 (75%), Gaps = 1/236 (0%)
Frame = -2
Query: 782 RLPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKFG 603
++PD + WNL+P+ASYV+ C NET+HGVEFDFIPD KG L+ DMSSN +SK VDVSKFG
Sbjct: 133 KIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFG 192
Query: 602 VIYAGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMG 423
VI+AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG
Sbjct: 193 VIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMG 252
Query: 422 RVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPG 246
VL+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFRIG G
Sbjct: 253 LVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKG 312
Query: 245 DDALEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 78
DDALEK FL A L ++ LKGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 313 DDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>BC016645-1|AAH16645.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 304 bits (747), Expect = 2e-82
Identities = 139/236 (58%), Positives = 178/236 (75%), Gaps = 1/236 (0%)
Frame = -2
Query: 782 RLPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKFG 603
++PD + WNL+P+ASYV+ C NET+HGVEFDFIPD KG L+ DMSSN +SK VDVSKFG
Sbjct: 133 KIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFG 192
Query: 602 VIYAGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMG 423
VI+AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG
Sbjct: 193 VIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMG 252
Query: 422 RVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPG 246
VL+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFRIG G
Sbjct: 253 LVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKG 312
Query: 245 DDALEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 78
DDALEK FL A L ++ LKGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 313 DDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>BC004863-1|AAH04863.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 304 bits (747), Expect = 2e-82
Identities = 139/236 (58%), Positives = 178/236 (75%), Gaps = 1/236 (0%)
Frame = -2
Query: 782 RLPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKFG 603
++PD + WNL+P+ASYV+ C NET+HGVEFDFIPD KG L+ DMSSN +SK VDVSKFG
Sbjct: 133 KIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFG 192
Query: 602 VIYAGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMG 423
VI+AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG
Sbjct: 193 VIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMG 252
Query: 422 RVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPG 246
VL+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFRIG G
Sbjct: 253 LVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKG 312
Query: 245 DDALEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 78
DDALEK FL A L ++ LKGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 313 DDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>BC000971-1|AAH00971.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 304 bits (747), Expect = 2e-82
Identities = 139/236 (58%), Positives = 178/236 (75%), Gaps = 1/236 (0%)
Frame = -2
Query: 782 RLPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKFG 603
++PD + WNL+P+ASYV+ C NET+HGVEFDFIPD KG L+ DMSSN +SK VDVSKFG
Sbjct: 133 KIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFG 192
Query: 602 VIYAGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMG 423
VI+AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG
Sbjct: 193 VIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMG 252
Query: 422 RVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPG 246
VL+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFRIG G
Sbjct: 253 LVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKG 312
Query: 245 DDALEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 78
DDALEK FL A L ++ LKGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 313 DDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>AY131232-1|AAN71736.1| 370|Homo sapiens phosphoserine
aminotransferase protein.
Length = 370
Score = 304 bits (747), Expect = 2e-82
Identities = 139/236 (58%), Positives = 178/236 (75%), Gaps = 1/236 (0%)
Frame = -2
Query: 782 RLPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKFG 603
++PD + WNL+P+ASYV+ C NET+HGVEFDFIPD KG L+ DMSSN +SK VDVSKFG
Sbjct: 133 KIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFG 192
Query: 602 VIYAGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMG 423
VI+AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG
Sbjct: 193 VIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMG 252
Query: 422 RVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPG 246
VL+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFRIG G
Sbjct: 253 LVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKG 312
Query: 245 DDALEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 78
DDALEK FL A L ++ LKGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 313 DDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>AL353594-1|CAI16882.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 304 bits (747), Expect = 2e-82
Identities = 139/236 (58%), Positives = 178/236 (75%), Gaps = 1/236 (0%)
Frame = -2
Query: 782 RLPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKFG 603
++PD + WNL+P+ASYV+ C NET+HGVEFDFIPD KG L+ DMSSN +SK VDVSKFG
Sbjct: 133 KIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFG 192
Query: 602 VIYAGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMG 423
VI+AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG
Sbjct: 193 VIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMG 252
Query: 422 RVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPG 246
VL+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFRIG G
Sbjct: 253 LVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKG 312
Query: 245 DDALEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 78
DDALEK FL A L ++ LKGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 313 DDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>AL353594-2|CAI16883.1| 324|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 324
Score = 211 bits (515), Expect = 3e-54
Identities = 92/157 (58%), Positives = 121/157 (77%)
Frame = -2
Query: 782 RLPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKFG 603
++PD + WNL+P+ASYV+ C NET+HGVEFDFIPD KG L+ DMSSN +SK VDVSKFG
Sbjct: 133 KIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFG 192
Query: 602 VIYAGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMG 423
VI+AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG
Sbjct: 193 VIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMG 252
Query: 422 RVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFY 312
VL+WI+ NGG M +L++ K+ IY I+ S GFY
Sbjct: 253 LVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFY 289
Score = 46.0 bits (104), Expect = 2e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = -2
Query: 170 VGGIRASIYNAVTLEEVQALVQYMEEFYKKH 78
VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 292 VGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 322
>AF113132-1|AAD42052.1| 324|Homo sapiens phosphoserine
aminotransferase protein.
Length = 324
Score = 211 bits (515), Expect = 3e-54
Identities = 92/157 (58%), Positives = 121/157 (77%)
Frame = -2
Query: 782 RLPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKFG 603
++PD + WNL+P+ASYV+ C NET+HGVEFDFIPD KG L+ DMSSN +SK VDVSKFG
Sbjct: 133 KIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFG 192
Query: 602 VIYAGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMG 423
VI+AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG
Sbjct: 193 VIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMG 252
Query: 422 RVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFY 312
VL+WI+ NGG M +L++ K+ IY I+ S GFY
Sbjct: 253 LVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFY 289
Score = 46.0 bits (104), Expect = 2e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = -2
Query: 170 VGGIRASIYNAVTLEEVQALVQYMEEFYKKH 78
VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 292 VGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 322
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,529,196
Number of Sequences: 237096
Number of extensions: 2804822
Number of successful extensions: 8979
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8957
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -