Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10l10r
(798 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35630.1 68417.m05060 phosphoserine aminotransferase, chlorop... 242 2e-64
At2g17630.1 68415.m02039 phosphoserine aminotransferase, putativ... 231 5e-61
At2g41310.1 68415.m05101 two-component responsive regulator / re... 34 0.13
At5g58150.1 68418.m07278 leucine-rich repeat transmembrane prote... 29 3.6
At2g38365.1 68415.m04713 expressed protein 29 3.6
At1g50370.1 68414.m05646 serine/threonine protein phosphatase, p... 29 3.6
At5g37210.1 68418.m04468 DC1 domain-containing protein contains ... 29 4.7
At5g49660.1 68418.m06147 leucine-rich repeat transmembrane prote... 28 6.2
At3g57040.1 68416.m06349 two-component responsive regulator / re... 28 6.2
At2g42500.2 68415.m05259 serine/threonine protein phosphatase PP... 28 8.3
At2g42500.1 68415.m05258 serine/threonine protein phosphatase PP... 28 8.3
At1g51910.1 68414.m05851 protein kinase family protein contains ... 28 8.3
>At4g35630.1 68417.m05060 phosphoserine aminotransferase,
chloroplast (PSAT) identical to Phosphoserine
aminotransferase, chloroplast precursor (PSAT)
(SP:Q96255)[Arabidopsis thaliana]; contains TIGRFAM
TIGR01364: phosphoserine aminotransferase; contains Pfam
PF00266: aminotransferase, class V
Length = 430
Score = 242 bits (593), Expect = 2e-64
Identities = 120/236 (50%), Positives = 159/236 (67%)
Frame = -2
Query: 782 RLPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKFG 603
++P + P+A Y+HIC NETIHGVEF P K L+ADMSSN SK VDVSKFG
Sbjct: 198 KVPSFEELEQTPDAKYLHICANETIHGVEFKDYPVPKNGFLVADMSSNFCSKPVDVSKFG 257
Query: 602 VIYAGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMG 423
VIY GAQKN+G SGV +VI+R+DL+ A P +LD+ + + +S+ NTPP F IY+ G
Sbjct: 258 VIYGGAQKNVGPSGVTIVIIRKDLIGNAQDITPVMLDYKIHDENSSLYNTPPCFGIYMCG 317
Query: 422 RVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIGCPGD 243
V + + GGL+ + + +KA L+YN IE+SNGF+ PV K+VRS MNVPF +
Sbjct: 318 LVFEDLLEQGGLKEVEKKNQRKADLLYNAIEESNGFFRCPVEKSVRSLMNVPFTL---EK 374
Query: 242 DALEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKHS 75
LE EF+K A ++QLKGHR VGG+RASIYNA+ L V+ LV +M++F KH+
Sbjct: 375 SELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 430
>At2g17630.1 68415.m02039 phosphoserine aminotransferase, putative
similar to Phosphoserine aminotransferase, chloroplast
precursor (PSAT) (SP:Q96255) [Arabidopsis thaliana];
contains TIGRFAM TIGR01364: phosphoserine
aminotransferase; contains Pfam PF00266:
aminotransferase, class V
Length = 422
Score = 231 bits (564), Expect = 5e-61
Identities = 118/227 (51%), Positives = 155/227 (68%), Gaps = 3/227 (1%)
Frame = -2
Query: 746 NASYVHICTNETIHGVEFDFIP---DTKGVPLIADMSSNIMSKKVDVSKFGVIYAGAQKN 576
+A Y+HIC NETIHGVEF P + GV LIADMSSN SK VDVSKFGVIYAGAQKN
Sbjct: 200 DAKYLHICANETIHGVEFKDYPLVENPDGV-LIADMSSNFCSKPVDVSKFGVIYAGAQKN 258
Query: 575 IGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMGRVLQWIQRN 396
+G SGV +VI+R+DL+ A P +LD+ + + +S+ NTPP F IY+ G V +
Sbjct: 259 VGPSGVTIVIIRKDLIGNARDITPVMLDYKIHDENSSLYNTPPCFGIYMCGLVFDDLLEQ 318
Query: 395 GGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIGCPGDDALEKEFLK 216
GGL+ + + +KA L+YN I++S GF+ PV K+VRS MNVPF + LE EF+K
Sbjct: 319 GGLKEVEKKNQRKAELLYNAIDESRGFFRCPVEKSVRSLMNVPFTL---EKSELEAEFIK 375
Query: 215 GAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKHS 75
A ++QLKGHR VGG+RASIYNA+ L V+ LV +M++F +H+
Sbjct: 376 EAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQARHA 422
>At2g41310.1 68415.m05101 two-component responsive regulator /
response reactor 3 (RR3) identical to response reactor 3
GI:3273200 from [Arabidopsis thaliana]; contains Pfam
profile: PF00072 response regulator receiver domain
Length = 225
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/97 (26%), Positives = 46/97 (47%)
Frame = -2
Query: 335 IEQSNGFYYAPVAKNVRSKMNVPFRIGCPGDDALEKEFLKGAETLGLIQLKGHRDVGGIR 156
+++S F PV + S NVP RI ++ E+ FLK + L +LK H ++
Sbjct: 93 VKESAAFRSIPVV--IMSSENVPARISRCLEEGAEEFFLKPVKLADLTKLKPHMMKTKLK 150
Query: 155 ASIYNAVTLEEVQALVQYMEEFYKKHSK*ILLNLYKQ 45
V +EE+ +EE ++ S +L L+++
Sbjct: 151 KESEKPVAIEEIVVSKPEIEEEEEESSVIEILPLHQE 187
>At5g58150.1 68418.m07278 leucine-rich repeat transmembrane protein
kinase, putative
Length = 785
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 408 DSKEWRIRRNVSIGNKESLTYLQH 337
DS WR+R +++G +L +L H
Sbjct: 612 DSAPWRLRHKIALGTARALAFLHH 635
>At2g38365.1 68415.m04713 expressed protein
Length = 120
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -2
Query: 383 GMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNV 270
G+SQL TKK ++I+NT E +N P + + ++ +
Sbjct: 70 GISQLVTKKWTIIFNT-ENTNNHVSLPAPQEISPRLRL 106
>At1g50370.1 68414.m05646 serine/threonine protein phosphatase,
putative nearly identical to serine/threonine protein
phosphatase [Arabidopsis thaliana] GI:14582206
Length = 303
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 203 KSQHPSRILFLRHHHQGNQF*MAHSFYCE 289
K++HP+ I LR +H+ Q + FY E
Sbjct: 97 KARHPANITLLRGNHESRQLTQVYGFYDE 125
>At5g37210.1 68418.m04468 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 625
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 176 CVLLAE*VPKSQHPSRILFLRHHHQGNQF 262
C+ L + S+HP RI F HQGN F
Sbjct: 276 CIDLPRVIRISRHPHRISFTPSFHQGNWF 304
>At5g49660.1 68418.m06147 leucine-rich repeat transmembrane protein
kinase, putative contains leucine rich repeat (LRR)
domains, Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 966
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 399 EWRIRRNVSIGNKESLTYLQHN 334
EWR R +++G + L YL H+
Sbjct: 758 EWRTRHQIAVGVAQGLAYLHHD 779
>At3g57040.1 68416.m06349 two-component responsive regulator /
response reactor 4 (RR4) identical to responce reactor4
GI:3273202 from [Arabidopsis thaliana]; contains Pfam
profile: PF00072 response regulator receiver domain
Length = 234
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 335 IEQSNGFYYAPVAKNVRSKMNVPFRIGCPGDDALEKEFLKGAETLGLIQLKGH 177
+++S+ F PV + S NVP RI ++ E+ FLK L +LK H
Sbjct: 95 VKESSAFRDIPVV--IMSSENVPARISRCLEEGAEEFFLKPVRLADLNKLKPH 145
>At2g42500.2 68415.m05259 serine/threonine protein phosphatase
PP2A-3 catalytic subunit (PP2A3) identical to SP|Q07100
Serine/threonine protein phosphatase PP2A-3 catalytic
subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains
Pfam profile PF00149: Ser/Thr protein phosphatase
Length = 266
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 143 YILRHEYRQRLCVLLAE*VPKSQHPSRILFLRHHHQGNQF*MAHSFYCE 289
Y+ R Y LL K ++P RI LR +H+ Q + FY E
Sbjct: 43 YVDRGYYSVETVTLLV--ALKMRYPQRITILRGNHESRQITQVYGFYDE 89
>At2g42500.1 68415.m05258 serine/threonine protein phosphatase
PP2A-3 catalytic subunit (PP2A3) identical to SP|Q07100
Serine/threonine protein phosphatase PP2A-3 catalytic
subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains
Pfam profile PF00149: Ser/Thr protein phosphatase
Length = 313
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 143 YILRHEYRQRLCVLLAE*VPKSQHPSRILFLRHHHQGNQF*MAHSFYCE 289
Y+ R Y LL K ++P RI LR +H+ Q + FY E
Sbjct: 90 YVDRGYYSVETVTLLV--ALKMRYPQRITILRGNHESRQITQVYGFYDE 136
>At1g51910.1 68414.m05851 protein kinase family protein contains
Serine/Threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 876
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 671 GVPLIADMSSNIMSKKVDVSKFGVI 597
G P D +N++S+K DV FGV+
Sbjct: 737 GTPGYLDPETNLLSEKTDVYSFGVV 761
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,883,821
Number of Sequences: 28952
Number of extensions: 389759
Number of successful extensions: 1000
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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