Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10l09r
         (753 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9LR20 Cluster: F26F24.30; n=1; Arabidopsis thaliana|Re...    36   0.81 
UniRef50_A0LZ28 Cluster: Membrane protein; n=1; Gramella forseti...    34   4.3  
UniRef50_Q6KIL1 Cluster: Aminotransferase protein S homolog; n=1...    33   7.6  
UniRef50_Q11R27 Cluster: A-glycosyltransferase-related protein, ...    33   7.6  
UniRef50_A4AW08 Cluster: Putative two-component system sensor hi...    33   7.6  
UniRef50_Q5NMG8 Cluster: Putative uncharacterized protein; n=2; ...    33   10.0 

>UniRef50_Q9LR20 Cluster: F26F24.30; n=1; Arabidopsis thaliana|Rep:
           F26F24.30 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 133

 Score = 36.3 bits (80), Expect = 0.81
 Identities = 15/35 (42%), Positives = 25/35 (71%)
 Frame = +1

Query: 178 VLFLWGSSSLTMHRAYWLILMLFLSLNSRHKFALF 282
           +LFLW SS L  ++A+WL+  L  S++SR  F+++
Sbjct: 64  MLFLWPSSRLASYQAWWLLSFLSGSISSRFSFSVW 98


>UniRef50_A0LZ28 Cluster: Membrane protein; n=1; Gramella forsetii
           KT0803|Rep: Membrane protein - Gramella forsetii (strain
           KT0803)
          Length = 232

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = +1

Query: 439 INYSNILTPSYLYFIQYFNNSSRKTLFFVTVPLKIV 546
           I Y N+L  + +  I Y N+ SRK++FF+T+ + IV
Sbjct: 147 IYYINLLVLAIVALIYYLNSYSRKSVFFITLVMAIV 182


>UniRef50_Q6KIL1 Cluster: Aminotransferase protein S homolog; n=1;
           Mycoplasma mobile|Rep: Aminotransferase protein S
           homolog - Mycoplasma mobile
          Length = 389

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 18/62 (29%), Positives = 34/62 (54%)
 Frame = -2

Query: 308 VSKTTILQKNKANLWRLFRDKNSIRISQ*ARCIVRELLPHKNRTDSLRLT*RIIFFCSDM 129
           V+   + +KN  +L+ + +DKN I I+  A+ ++ E +  KN +D       ++F  + M
Sbjct: 157 VNNALLKKKNLKSLYEICKDKNIILINDAAQAVISEKIDLKNESDV------VVFSSNKM 210

Query: 128 FG 123
           FG
Sbjct: 211 FG 212


>UniRef50_Q11R27 Cluster: A-glycosyltransferase-related protein,
           glycosyltransferase family 4 protein; n=1; Cytophaga
           hutchinsonii ATCC 33406|Rep:
           A-glycosyltransferase-related protein,
           glycosyltransferase family 4 protein - Cytophaga
           hutchinsonii (strain ATCC 33406 / NCIMB 9469)
          Length = 359

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
 Frame = +1

Query: 184 FLWGSSSLTMHRAYWLILMLFLS---LNSRHKFALFFCRMVVLDTLPLFWAVASRYLNFQ 354
           + WG S +     Y++   LFL    L  R+K  + +   +    LP   A+A +++N +
Sbjct: 59  YSWGKSKVQT-LLYFVFSQLFLFIRLLKYRNKDVVIYVNTI----LPFGAALAGKFMNKK 113

Query: 355 ITLHSTTIVVKPSLSRSFFF 414
           +  H     +KP+L +SF F
Sbjct: 114 VVYHIHETSIKPALFKSFLF 133


>UniRef50_A4AW08 Cluster: Putative two-component system sensor
           histidine kinase; n=1; Flavobacteriales bacterium
           HTCC2170|Rep: Putative two-component system sensor
           histidine kinase - Flavobacteriales bacterium HTCC2170
          Length = 448

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 16/65 (24%), Positives = 36/65 (55%)
 Frame = +1

Query: 328 VASRYLNFQITLHSTTIVVKPSLSRSFFFSQTKVIN*INYSNILTPSYLYFIQYFNNSSR 507
           + SR + FQ+ L    ++   +++ +FFF +++ +    +  +L    ++ IQY N ++R
Sbjct: 1   MVSRNIYFQLILR-IVLITATAIAMAFFFFKSEYLATSLFLVLLVLQTIFVIQYINQTNR 59

Query: 508 KTLFF 522
           K  +F
Sbjct: 60  KIAYF 64


>UniRef50_Q5NMG8 Cluster: Putative uncharacterized protein; n=2;
           Bacteria|Rep: Putative uncharacterized protein -
           Zymomonas mobilis
          Length = 807

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 129 HV*TE-KNDSLSQSKRISPIFVGKQFPHNASSLLANSYAVFI 251
           HV  E KND  + SK I+  F+ KQ PH +  ++  +Y  FI
Sbjct: 620 HVWVEVKNDDNNPSKAIAAYFISKQEPHVSHCVINENYVEFI 661


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,051,550
Number of Sequences: 1657284
Number of extensions: 12836681
Number of successful extensions: 28053
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28051
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)