Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10l09r
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    25   0.65 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   8.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.0  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 652 RMSRSKFKPDLKTRTGTSHSSILAQWTTTNS 560
           R S +  KP L   TG++ S  +A  T TNS
Sbjct: 183 RDSPNYIKPQLHVSTGSTSSPTIASATYTNS 213


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 116 ITRVVRTRLEDSRNNYKKNIYV 51
           ITRV+ +++ DSR N   +I V
Sbjct: 159 ITRVIDSKVVDSRKNTTVSIDV 180


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 246 KQHKN*PVSSMHCE 205
           KQ  N P+S+ HC+
Sbjct: 87  KQQANPPISTEHCD 100


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 11  LTQINQCQCSNLLTHIYFFYN 73
           +T I Q  CS LL  + +F+N
Sbjct: 69  ITTILQRYCSVLLVFLTYFFN 89


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 11  LTQINQCQCSNLLTHIYFFYN 73
           +T I Q  CS LL  + +F+N
Sbjct: 65  ITTILQRYCSVLLVFLTYFFN 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,176
Number of Sequences: 336
Number of extensions: 3542
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)