Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10l09f
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro...    28   4.5  
Z50873-3|CAA90761.4|  531|Caenorhabditis elegans Hypothetical pr...    27   7.8  
AC024759-4|AAK68434.1|  356|Caenorhabditis elegans Hypothetical ...    27   7.8  

>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical protein
            F33C8.1b protein.
          Length = 1234

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
 Frame = +1

Query: 427  IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYL 534
            +  VV   +  P N + F+V+FAAC +V LV AGL+++
Sbjct: 1124 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM 1161


>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical protein
            F33C8.1a protein.
          Length = 1271

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
 Frame = +1

Query: 427  IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYL 534
            +  VV   +  P N + F+V+FAAC +V LV AGL+++
Sbjct: 1161 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM 1198


>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin protein.
          Length = 1329

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
 Frame = +1

Query: 427  IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYL 534
            +  VV   +  P N + F+V+FAAC +V LV AGL+++
Sbjct: 1161 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM 1198


>Z50873-3|CAA90761.4|  531|Caenorhabditis elegans Hypothetical
           protein F17E5.2 protein.
          Length = 531

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 289 IDLEELSEPTTTLQPAQQSSESPLLSG 369
           IDL+ + E   T+QP + S   PL+ G
Sbjct: 23  IDLKNIGEHARTVQPFKTSKHQPLIQG 49


>AC024759-4|AAK68434.1|  356|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.4 protein.
          Length = 356

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 534 DNDHHDSGLNVTWLGH 581
           D+ H +SGL  TWLGH
Sbjct: 76  DDFHSESGLFATWLGH 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,334,057
Number of Sequences: 27780
Number of extensions: 255887
Number of successful extensions: 737
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)