Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10l08r
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023884-1|ABA81818.1|  697|Drosophila melanogaster RE55168p pro...    29   4.7  
AE014296-1307|AAN12047.1|  163|Drosophila melanogaster CG32375-P...    29   4.7  

>BT023884-1|ABA81818.1|  697|Drosophila melanogaster RE55168p
           protein.
          Length = 697

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 117 SHYSTXAYREKKLLFTQLNPKQHXDXTILSPNRISIYKYFQNESEQIF 260
           +H+ST +    K        + H   T   P+ +  Y+YFQ++ EQIF
Sbjct: 79  AHHSTTSGHAAKGQHHSPPSRIHSPPTEHHPDHVGHYEYFQHQHEQIF 126


>AE014296-1307|AAN12047.1|  163|Drosophila melanogaster CG32375-PA
           protein.
          Length = 163

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 117 SHYSTXAYREKKLLFTQLNPKQHXDXTILSPNRISIYKYFQNESEQIF 260
           +H+ST +    K        + H   T   P+ +  Y+YFQ++ EQIF
Sbjct: 79  AHHSTTSGHAAKGQHHSPPSRIHSPPTEHHPDHVGHYEYFQHQHEQIF 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,827,687
Number of Sequences: 53049
Number of extensions: 363358
Number of successful extensions: 593
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)