Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10l04f
(576 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY994091-1|AAX86004.1| 83|Anopheles gambiae hyp6.3 precursor p... 25 1.8
AY578800-1|AAT07305.1| 379|Anopheles gambiae decapentaplegic pr... 24 3.1
U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase... 23 5.4
U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase... 23 5.4
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 23 5.4
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 23 7.1
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 9.4
AY146746-1|AAO12061.1| 333|Anopheles gambiae odorant-binding pr... 23 9.4
AJ973471-1|CAJ01518.1| 122|Anopheles gambiae hypothetical prote... 23 9.4
AJ697731-1|CAG26924.1| 122|Anopheles gambiae putative chemosens... 23 9.4
AJ697730-1|CAG26923.1| 122|Anopheles gambiae putative chemosens... 23 9.4
>AY994091-1|AAX86004.1| 83|Anopheles gambiae hyp6.3 precursor
protein.
Length = 83
Score = 25.0 bits (52), Expect = 1.8
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 45 MKFALLFVLTAIVAVSTNEVADPRSTDRANALSIGSITSSDRLLRSFVVSRAATI 209
MKFA FVL A+ AV A P+ ++A A S ++ +++ +AA +
Sbjct: 1 MKFAFAFVLIALFAVFAVSQALPQ-PEQAAASSNDGASAITKIVLELTPEQAAAV 54
>AY578800-1|AAT07305.1| 379|Anopheles gambiae decapentaplegic
protein.
Length = 379
Score = 24.2 bits (50), Expect = 3.1
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = -3
Query: 262 LTRLPAG----AVNLTLRTRQLIVAARLTTKLRKSLSLEVILPILKALALSVDLGSATSL 95
+T +P G A LTL TR+ I + R + +V++ + + L
Sbjct: 94 VTSIPRGEKLRAAELTL-TREGIAHRSSRAQARTPVLYQVMVYDIVRPGVKGKRAPTFLL 152
Query: 94 VDTATIAVNTNNRANF 47
VDT T+A+N + A+F
Sbjct: 153 VDTKTLAINESGTASF 168
>U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase
protein.
Length = 260
Score = 23.4 bits (48), Expect = 5.4
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 56 SELHLAGNLYWYSESIVS 3
+E HLA +++W+S+ I S
Sbjct: 54 AEEHLAASIFWWSKIIFS 71
>U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase
protein.
Length = 332
Score = 23.4 bits (48), Expect = 5.4
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 56 SELHLAGNLYWYSESIVS 3
+E HLA +++W+S+ I S
Sbjct: 126 AEEHLAASIFWWSKIIFS 143
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.4 bits (48), Expect = 5.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 376 KNALRGAFTN*RFTKVKPTPPPVRRT 299
+NA R A T R + P PPP RT
Sbjct: 1062 RNAARRAATQQRQAERLPPPPPSPRT 1087
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 23.0 bits (47), Expect = 7.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 325 PTPPPVRRTLVNCVDPRTRTALTR 254
P+PPP RT D R R A R
Sbjct: 1069 PSPPPSPRTAARRADLRLRQARFR 1092
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 22.6 bits (46), Expect = 9.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -3
Query: 349 N*RFTKVKPTPPPVRRTLVNCVDPRTRTALTR 254
N R P PPP R D R R A R
Sbjct: 1126 NRRSQPTPPAPPPTPREAARLEDGRRRVARWR 1157
>AY146746-1|AAO12061.1| 333|Anopheles gambiae odorant-binding
protein AgamOBP43 protein.
Length = 333
Score = 22.6 bits (46), Expect = 9.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 341 SSVCERAAKSIFFYRTNLGTLK 406
+ VCERA +S Y + G L+
Sbjct: 130 TDVCERAHRSFLCYHQHYGYLR 151
>AJ973471-1|CAJ01518.1| 122|Anopheles gambiae hypothetical protein
protein.
Length = 122
Score = 22.6 bits (46), Expect = 9.4
Identities = 9/40 (22%), Positives = 23/40 (57%)
Frame = +3
Query: 69 LTAIVAVSTNEVADPRSTDRANALSIGSITSSDRLLRSFV 188
+ AI A+ + + TD+ + + + + S+DR+L +++
Sbjct: 6 MVAIFAMVVVLASAQKYTDKFDNIDVDRVLSNDRILNNYL 45
>AJ697731-1|CAG26924.1| 122|Anopheles gambiae putative chemosensory
protein CSP2 protein.
Length = 122
Score = 22.6 bits (46), Expect = 9.4
Identities = 9/40 (22%), Positives = 23/40 (57%)
Frame = +3
Query: 69 LTAIVAVSTNEVADPRSTDRANALSIGSITSSDRLLRSFV 188
+ AI A+ + + TD+ + + + + S+DR+L +++
Sbjct: 6 MVAIFAMVVVLASAQKYTDKFDNIDVDRVLSNDRILNNYL 45
>AJ697730-1|CAG26923.1| 122|Anopheles gambiae putative chemosensory
protein CSP1 protein.
Length = 122
Score = 22.6 bits (46), Expect = 9.4
Identities = 9/40 (22%), Positives = 23/40 (57%)
Frame = +3
Query: 69 LTAIVAVSTNEVADPRSTDRANALSIGSITSSDRLLRSFV 188
+ AI A+ + + TD+ + + + + S+DR+L +++
Sbjct: 6 MVAIFAMVVVLASAQKYTDKFDNIDVDRVLSNDRILNNYL 45
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,272
Number of Sequences: 2352
Number of extensions: 9571
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -