Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10l02r
         (699 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical pr...    39   0.003
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p...    28   5.6  
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr...    28   5.6  
AF025457-12|AAY55849.1|  244|Caenorhabditis elegans Hypothetical...    28   5.6  
AF022975-10|AAB70668.2|  661|Caenorhabditis elegans Hypothetical...    28   5.6  
AC006637-1|AAK85476.2|  342|Caenorhabditis elegans Hypothetical ...    28   7.4  

>Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical
           protein C38C6.2 protein.
          Length = 647

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
 Frame = -1

Query: 549 PARTPYHWDNSTSAGFSTSTNTWLPVAEDYQEINLAKQKETARSHFKNYQALTKLR-KQA 373
           P +    WD+S + GF+++ +  +P   D   IN  +Q    +S  K +  L KLR ++ 
Sbjct: 488 PQKGAMQWDDSLNGGFTSAISPPVPSNIDVANINWKRQYAEPQSTLKIFAKLAKLRQRED 547

Query: 372 TLSHGEYDIRALSDRTFYLVR-----SLPTHDTYVLLFNVSERRDTVDLGRVP 229
            L  G   I  L D  F + R     +  T + YV   N +E    + L  +P
Sbjct: 548 ALMTGTTLIGRLVDGAFTITRFNNFENRTTGNIYVAALNFAEHPVKLPLTDLP 600


>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
            protein C28A5.6 protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
 Frame = -1

Query: 561  YSRDPARTPYHWDNSTSA---GFSTSTNTWLPVAEDYQEINLAKQ-KETARSHFKNYQAL 394
            Y    A +   W +ST A   G       W   +E+  E+   +   +  R HF+NY+ L
Sbjct: 930  YDSTSATSLSTWTSSTCATDEGEEKRKFKWSLKSEEDSEVEFFEDLDQEEREHFRNYENL 989

Query: 393  TKL--RKQATLSHGEYDIRALSD 331
              L  + +  LS G  ++  LSD
Sbjct: 990  VALSVKDEVALSSGS-EVEPLSD 1011


>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical protein
            C28A5.6 protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
 Frame = -1

Query: 561  YSRDPARTPYHWDNSTSA---GFSTSTNTWLPVAEDYQEINLAKQ-KETARSHFKNYQAL 394
            Y    A +   W +ST A   G       W   +E+  E+   +   +  R HF+NY+ L
Sbjct: 930  YDSTSATSLSTWTSSTCATDEGEEKRKFKWSLKSEEDSEVEFFEDLDQEEREHFRNYENL 989

Query: 393  TKL--RKQATLSHGEYDIRALSD 331
              L  + +  LS G  ++  LSD
Sbjct: 990  VALSVKDEVALSSGS-EVEPLSD 1011


>AF025457-12|AAY55849.1|  244|Caenorhabditis elegans Hypothetical
           protein C08E3.14 protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 134 ASNDNCELVISCPAN 178
           AS DNCEL +SCP +
Sbjct: 177 ASEDNCELSVSCPGS 191


>AF022975-10|AAB70668.2|  661|Caenorhabditis elegans Hypothetical
           protein K09C6.1 protein.
          Length = 661

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
 Frame = -1

Query: 561 YSRDPARTPYHWDNSTSA---GFSTSTNTWLPVAEDYQEINLAKQ-KETARSHFKNYQAL 394
           Y    A +   W +ST A   G       W   +E+  E+   +   +  R HF+NY+ L
Sbjct: 525 YDSTSATSLSTWTSSTCATDEGEEKRKFKWSLKSEEDSEVEFFEDLDQEEREHFRNYENL 584

Query: 393 TKL--RKQATLSHGEYDIRALSD 331
             L  + +  LS G  ++  LSD
Sbjct: 585 VALSIKDEVALSSGS-EVEPLSD 606


>AC006637-1|AAK85476.2|  342|Caenorhabditis elegans Hypothetical
           protein F41B4.1 protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 570 YHLYSRDPARTPYHWDNST-SAGFSTSTNTWLPVAEDYQEINLAKQKETARSHF 412
           YH ++  PA  P H +N+      +TST ++ P +  Y   N   Q   ++S +
Sbjct: 205 YHRHATPPAPAPQHQNNTNYYTENTTSTTSYHPTSVTYGSSNANSQYGGSQSQY 258


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,509,293
Number of Sequences: 27780
Number of extensions: 287823
Number of successful extensions: 716
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)