Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10l02f
         (665 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...   196   2e-52
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.   184   7e-49
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...   184   7e-49
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...   163   2e-42
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   2.6  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   4.6  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   6.0  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   8.0  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   8.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   8.0  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score =  196 bits (478), Expect = 2e-52
 Identities = 86/175 (49%), Positives = 117/175 (66%), Gaps = 1/175 (0%)
 Frame = +1

Query: 136 PTEVIQLDWWKNCVLYQIYPRSFXXXXXXXXXXXXXXXXELKHFVDAGVDAIWMSPIFES 315
           P + +  +W+KN ++YQIYPRSF                 + H  D G DA+W+SPI++S
Sbjct: 18  PIDCVDANWYKNALVYQIYPRSFQDSDGDGIGDLNGITARMDHIADIGADALWLSPIYKS 77

Query: 316 PMVDFGYDISNFYDIHYEYGTMEDFEELLDKAHELGLKVLLDFVPNHASNESEYFIKSEA 495
           P VDFGYDISNF D+   YGT+ DF+ L+ +A  LGLKV+LDFVPNH+S+E  +F KS  
Sbjct: 78  PQVDFGYDISNFTDVDPVYGTLADFDRLVRRAKSLGLKVILDFVPNHSSHEHPWFKKSVQ 137

Query: 496 REPGYENFFIWADP-LPNPENPGVRLPPSNWVSQFGGSAWEWSEKRQQYYLHQFA 657
           R   Y+ +++W D  + N    G R PP+NW+S F GSAW+W+E+R+QYYLHQFA
Sbjct: 138 RIKPYDEYYVWRDARIVN----GTRQPPNNWLSVFWGSAWQWNEERKQYYLHQFA 188


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score =  184 bits (448), Expect = 7e-49
 Identities = 81/164 (49%), Positives = 107/164 (65%)
 Frame = +1

Query: 166 KNCVLYQIYPRSFXXXXXXXXXXXXXXXXELKHFVDAGVDAIWMSPIFESPMVDFGYDIS 345
           ++ ++YQ+YPRSF                +L HF++ GVD  W+SPI+ SPMVDFGYDIS
Sbjct: 28  EDLIVYQVYPRSFKDSNGDGIGDIEGIKEKLDHFLEMGVDMFWLSPIYPSPMVDFGYDIS 87

Query: 346 NFYDIHYEYGTMEDFEELLDKAHELGLKVLLDFVPNHASNESEYFIKSEAREPGYENFFI 525
           N+ D+H  +GT+ D + L+  AHE GLK++LDFVPNH S++ E+F  S      Y N++I
Sbjct: 88  NYTDVHPIFGTISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYI 147

Query: 526 WADPLPNPENPGVRLPPSNWVSQFGGSAWEWSEKRQQYYLHQFA 657
           W    P     G R+PP+NWV  FGGSAW W E+RQ YYLHQFA
Sbjct: 148 WH---PGKIVNGKRVPPTNWVGVFGGSAWSWREERQAYYLHQFA 188


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score =  184 bits (448), Expect = 7e-49
 Identities = 81/164 (49%), Positives = 107/164 (65%)
 Frame = +1

Query: 166 KNCVLYQIYPRSFXXXXXXXXXXXXXXXXELKHFVDAGVDAIWMSPIFESPMVDFGYDIS 345
           ++ ++YQ+YPRSF                +L HF++ GVD  W+SPI+ SPMVDFGYDIS
Sbjct: 28  EDLIVYQVYPRSFKDSNGDGIGDIEGIKEKLDHFLEMGVDMFWLSPIYPSPMVDFGYDIS 87

Query: 346 NFYDIHYEYGTMEDFEELLDKAHELGLKVLLDFVPNHASNESEYFIKSEAREPGYENFFI 525
           N+ D+H  +GT+ D + L+  AHE GLK++LDFVPNH S++ E+F  S      Y N++I
Sbjct: 88  NYTDVHPIFGTISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYI 147

Query: 526 WADPLPNPENPGVRLPPSNWVSQFGGSAWEWSEKRQQYYLHQFA 657
           W    P     G R+PP+NWV  FGGSAW W E+RQ YYLHQFA
Sbjct: 148 WH---PGKIVNGKRVPPTNWVGVFGGSAWSWREERQAYYLHQFA 188


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score =  163 bits (395), Expect = 2e-42
 Identities = 73/171 (42%), Positives = 107/171 (62%), Gaps = 6/171 (3%)
 Frame = +1

Query: 160 WWKNCVLYQIYPRSFXXXXXXXXXXXXXXXXELKHFVDAGVDAIWMSPIFESPMVDFGYD 339
           WWKN + YQ+YPRSF                +L HF+++G+ AIW+SPI  SPMVDFGYD
Sbjct: 24  WWKNAIFYQVYPRSFMDSNSDGIGDLKGIKDKLSHFIESGITAIWLSPINRSPMVDFGYD 83

Query: 340 ISNFYDIHYEYGTMEDFEELLDKAHELGLKVLLDFVPNHASNESEYFIKS-----EAREP 504
           IS+F D+   +GT++D E+L  +A +  LKV+LD VPNH S++ ++F  S          
Sbjct: 84  ISDFKDVDPIFGTIKDLEDLTAEAKKQNLKVILDLVPNHTSDQHKWFQMSINNTNNNNTN 143

Query: 505 GYENFFIWADPLPNPE-NPGVRLPPSNWVSQFGGSAWEWSEKRQQYYLHQF 654
            Y++++IW DP+ + + NP     P+NW+S F G+ W + E R+Q+Y HQF
Sbjct: 144 KYKDYYIWVDPVKDDKGNPIKDKYPNNWLSVFNGTGWTFHEGRKQFYFHQF 194


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 575 GGSLTPGFSGFGRGSAQ 525
           GG+L PG +  G+G+A+
Sbjct: 68  GGALFPGMAAAGKGAAR 84


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 288 YLDVSDIRIPHGRLW 332
           Y  V D+RIP  RLW
Sbjct: 92  YGGVRDLRIPPHRLW 106


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 10  TAATMRATKVVVLVVGSIALLGLVAGF 90
           TAA M    V  L+VG++A L  V G+
Sbjct: 286 TAAGMMCQPVGTLIVGALAGLLSVLGY 312


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 280 VDAIWMSPIFESPMVDFGYDISNFY 354
           VD   M     S +VD G D+S FY
Sbjct: 181 VDLRHMDEKSGSNVVDVGVDLSEFY 205


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 280 VDAIWMSPIFESPMVDFGYDISNFY 354
           VD   M     S +VD G D+S FY
Sbjct: 181 VDLRHMDEKSGSNVVDVGVDLSEFY 205


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 319 WGIRISETSK*HPRLHLRS 263
           WGI + E S   PR  +RS
Sbjct: 512 WGILVYEPSACRPRHEIRS 530


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,776
Number of Sequences: 438
Number of extensions: 3999
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)