Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10l01r
         (658 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ABP5 Cluster: Alpha-galactosidase; n=1; Bacteroides t...    34   3.5  
UniRef50_Q8G6G7 Cluster: Possible cell surface protein with gram...    33   4.6  
UniRef50_Q5KQY6 Cluster: Galactoside O-acetyltransferase; n=3; K...    33   6.0  
UniRef50_A5K5G4 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  

>UniRef50_Q8ABP5 Cluster: Alpha-galactosidase; n=1; Bacteroides
            thetaiotaomicron|Rep: Alpha-galactosidase - Bacteroides
            thetaiotaomicron
          Length = 845

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 10/132 (7%)
 Frame = +1

Query: 235  VNNDGLGNDSCISAWLVHVHNDLNERSGLAWCDWSNDNRGGHDWLSDSTTVG-------- 390
            +   G  +  C+      + +   E S   WC WS+    G D   D ++          
Sbjct: 681  IRGSGQSSSDCVYNQAGGLTSTEAETSFAMWCMWSSPILLGFDMTKDMSSADLAHDLALV 740

Query: 391  KREVDDFGSEDRLLYGVE--SDEDFVQMLEKESSGGWVCAGAVDSVQNGLQLSISLSGFD 564
            K E     ++D L  G E     D +   +K+ + G V   AV+   N    +IS++ +D
Sbjct: 741  KNEELIAINQDALGQGAEYIKSADGIDYYQKDLADGDVAIAAVNLSDNSATYTISMADYD 800

Query: 565  GASGSHSYDSNE 600
                S SY + +
Sbjct: 801  ALDLSESYSARD 812


>UniRef50_Q8G6G7 Cluster: Possible cell surface protein with gram
            positive anchor domain; n=4; Bacteria|Rep: Possible cell
            surface protein with gram positive anchor domain -
            Bifidobacterium longum
          Length = 2573

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
 Frame = +1

Query: 220  DFIRLVNNDGLGNDSCISAWLVHVHNDLNERSGLAWCDWSNDNRGGHDWLSDSTTVGKRE 399
            DF+  + N       C  A      +D   R G+A   ++  NRGGH W  ++T   K+E
Sbjct: 1287 DFVPTIRNSSTDAAVCGGAVRAQAASDTTTRRGMAG-GYAGRNRGGHIW-GNNTAAWKQE 1344

Query: 400  VDD--FGSEDRLLYGVESDEDFVQMLEKESSGGWVCAGAVDSVQNGLQLSISLSG 558
              D  +    R+ Y          +   E +GG+   G +D+       S+SL G
Sbjct: 1345 NTDGKYNGPQRVAYAAR----IRSVYGAEIAGGY--TGFMDAADTAEGGSLSLLG 1393


>UniRef50_Q5KQY6 Cluster: Galactoside O-acetyltransferase; n=3;
           Klebsiella pneumoniae|Rep: Galactoside
           O-acetyltransferase - Klebsiella pneumoniae
          Length = 170

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +1

Query: 184 FSLFGDNNGVGFDFIRLVNNDGLGNDSCISAWLVHVHND 300
           F   GDN  +G DFI  VN   +GNDS IS+ +  + ND
Sbjct: 58  FVKMGDNVSIGADFISQVNLT-IGNDSLISSRVSFIGND 95


>UniRef50_A5K5G4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1044

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +1

Query: 388 GKREVDDFGSEDRLLYGVESDEDFVQMLEKESSGG 492
           G+ E+ D  S D +L G+ESDED  + +++ SSGG
Sbjct: 112 GEEEMSDM-STDEMLSGMESDEDVSEEVKQFSSGG 145


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,942,997
Number of Sequences: 1657284
Number of extensions: 8906501
Number of successful extensions: 24145
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24124
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)