Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k24r
         (752 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    40   3e-05
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    29   0.035
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   1.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.3  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   3.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   7.1  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    22   7.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.4  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 39.9 bits (89), Expect = 3e-05
 Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 4/181 (2%)
 Frame = -2

Query: 700 TRPGLLFETTKYINHPEYSE-NLNVVQPHDIGLIDFGRKIEFNDYIQPIRL--QRSADKN 530
           T   +L    K I HP+Y     +  Q +DI L+   + I+F D + P  L  Q   D  
Sbjct: 228 TNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLDSF 287

Query: 529 RNYDNVRLVAXXXXXXXXXXXSPENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYN 350
              D   +                 L    LN ++ + C   Y +   I  + +C     
Sbjct: 288 AGSD---VTVLGWGHTSFNGMLSHILQKTTLNMLTQVEC---YKYYGNIMVNAMCAYAKG 341

Query: 349 DTTQSTCQGDSGGP-LTVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIRPGHYLDWFKTV 173
              +  CQ DSGGP L       ++  +G+ S+ +  G +   P+G  + G Y+DW  + 
Sbjct: 342 ---KDACQMDSGGPVLWQNPRTKRLVNIGIISWGAECGKY---PNGNTKVGSYIDWIVSQ 395

Query: 172 T 170
           T
Sbjct: 396 T 396


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 29.5 bits (63), Expect = 0.035
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 159 SIGHRAHQKHPRQRKRLVQQKHPTRQRR 76
           SI HR H K+ +QRK + Q +   R++R
Sbjct: 53  SIYHRQHSKNEQQRKEMEQMREREREQR 80


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 442 FLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQ 338
           FLNG+ NL   + +++     PS IC    N+T Q
Sbjct: 96  FLNGLDNLHEYLKFSYPRMRAPSFICE---NETRQ 127


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 304 TVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIR 206
           T++ E    T  G + F++  GCH DI    I+
Sbjct: 344 TIMFEGHDTTASGSSFFLAVMGCHPDIQEKVIQ 376


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 731 NHRPSWSSEPDPPRLALR 678
           N+RP + S+P PP   LR
Sbjct: 99  NNRPVYISQPRPPHPRLR 116



 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 731 NHRPSWSSEPDPPRLALR 678
           N+RP + S+P PP   LR
Sbjct: 155 NNRPVYISQPRPPHPRLR 172


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 326 LTSGLRSVVVAKRANGGGLNGRTEVVGH 409
           L +G  +VV+       G+ GRT  VG+
Sbjct: 131 LITGWSAVVITAAICTSGIVGRTHTVGY 158



 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 736 VTIIVRAGAVNLTRPGLLFETTKYINH 656
           V+II+    + L   GLL   ++Y+NH
Sbjct: 411 VSIIMYIAFIILQYAGLLRNRSEYLNH 437


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/14 (64%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
 Frame = +3

Query: 432 PFKNTQFKFS-GDE 470
           PFKNT+ KF  G+E
Sbjct: 57  PFKNTEIKFKLGEE 70


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 698  GQVHCSSSDDDCYTQTG 748
            G+ H S  DD  Y QTG
Sbjct: 1610 GKGHGSDKDDVVYQQTG 1626


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,256
Number of Sequences: 438
Number of extensions: 5068
Number of successful extensions: 33
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)