Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k24f
(575 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 61 7e-10
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 56 2e-08
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 56 3e-08
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 55 4e-08
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 6e-08
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 54 1e-07
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 53 2e-07
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 53 2e-07
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 52 3e-07
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 52 4e-07
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 51 6e-07
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 51 6e-07
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 51 8e-07
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 50 2e-06
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 47 1e-05
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 46 3e-05
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 45 4e-05
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 45 5e-05
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 45 5e-05
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 44 7e-05
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 44 1e-04
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 44 1e-04
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 43 2e-04
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 42 3e-04
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 42 5e-04
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 41 6e-04
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 39 0.003
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.010
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 36 0.031
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.055
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 34 0.072
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.89
SB_27305| Best HMM Match : MFMR (HMM E-Value=0.53) 31 0.89
SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42) 28 4.8
SB_58889| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_32678| Best HMM Match : HEAT (HMM E-Value=9.6e-18) 28 6.3
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 27 8.3
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 60.9 bits (141), Expect = 7e-10
Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Frame = +2
Query: 125 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLR--VTII 298
P +RIV G A +G +P+Q +R S G CG ++IH W LTA HC R +
Sbjct: 660 PSTRIVGGTAAKQGDWPWQAQLRSTS---GFPFCGGSLIHPQWVLTATHCVSSRRPTDLN 716
Query: 299 VRAGAVNLTRPGLLFE----TTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFNDY 454
+R GA N R L E K I HP Y + + + HDI LI + N +
Sbjct: 717 IRLGAHN-RRANLGMEQDIKVEKIIMHPGYRKPVGLA--HDIALIKLLKPANLNRF 769
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Frame = +2
Query: 224 CGATIIHSNWGLTAAHC-TGLRVT---IIVRAGAVNLTRPGL--LFETTKYINHPEYSEN 385
CG +++ W +TAAHC G T +V + + G + + I HP Y+
Sbjct: 93 CGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPTYN-- 150
Query: 386 LNVVQPHDIGLIDFGRKIEFND 451
+ +DI LI+ + +D
Sbjct: 151 -SPQLSNDIALIELSSPVPLSD 171
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +2
Query: 131 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLR--VTIIVR 304
SRIV G A+ G +P+Q +R T G CG ++IHSNW LTAAHC + ++VR
Sbjct: 389 SRIVGGAAANPGDWPWQAQLR---TTTGFPYCGGSLIHSNWVLTAAHCISSKRPAEVVVR 445
Query: 305 AGA 313
GA
Sbjct: 446 LGA 448
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 55.6 bits (128), Expect = 3e-08
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Frame = +2
Query: 128 GSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC---TGLRVTII 298
G RIV G EA +P+Q+SIR+ G + CG +++ W LTAAHC +
Sbjct: 28 GVRIVGGDEAVPHSWPWQVSIRLK----GSHICGGSLLSPLWLLTAAHCVIRSNNSADYT 83
Query: 299 VRAGAVNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFNDYIQPIRLQR 478
V GA G + + + H +Y + + HD+ LI + F+ + P+ L +
Sbjct: 84 VIVGAHKRVLDGTEHKLSTFYKHEKYVGGKD--KKHDLALIKLAKPATFSTKVSPVCLPK 141
Query: 479 SADKNRNYDN 508
D + +N
Sbjct: 142 QGDLMKEREN 151
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 55.2 bits (127), Expect = 4e-08
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Frame = +2
Query: 125 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLR--VTII 298
P +RIV G A G +P+Q +R T G CG ++I W LTA HC + +I+
Sbjct: 7 PNTRIVGGTAAKHGDWPWQAQLR---TTSGFPYCGGSLIAPQWILTATHCVERKQASSIV 63
Query: 299 VRAGA---VNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKI 439
+R GA V + TK I HP Y + HDI L+ + +
Sbjct: 64 IRLGARRRVATVGTEKDYIVTKVITHPSYHK--PKTYSHDIALLKLDKPV 111
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 54.4 bits (125), Expect = 6e-08
Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Frame = +2
Query: 125 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLR--VTII 298
P +RIV G +A G +P+Q +R S GG CG T++H W +TAAHC R
Sbjct: 136 PHTRIVGGTKAPPGAWPWQAMLR--SNYGG-QFCGGTLVHPQWVITAAHCVYRRGPNDFK 192
Query: 299 VRAGAVNLTRPGLL-----FETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFN 448
+R GA R G F ++ I HP Y + HDI LI+ + N
Sbjct: 193 IRMGA--HFRKGDYGTEQDFSLSRVITHPSYHKPTRYA--HDIALIELAKPAVIN 243
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 53.6 bits (123), Expect = 1e-07
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Frame = +2
Query: 131 SRIVSGWEASEGQFPYQLSIRMV--STVGGVNACGATIIHSNWGLTAAHCTGLR-----V 289
+RIV G A +G +P+Q+S+ V + CG +++ W +TAAHC
Sbjct: 102 TRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFAYSKDAKDY 161
Query: 290 TIIVRAGAVNLT-----RPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFNDY 454
TI V +N T RP + + I HP+Y+ + N +D+ LI +++ND
Sbjct: 162 TIAVGEHDLNATDGYEQRP----DVERIILHPKYAPHNN--HDYDVALIKLASPLQYNDR 215
Query: 455 IQPIRL 472
++P+ L
Sbjct: 216 VRPVCL 221
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Frame = +2
Query: 131 SRIVSGWEASEGQFPYQLSIRMVSTVGG-VNACGATIIHSNWGLTAAHC-TGL----RVT 292
SR+++G +A+ +P+Q+S+RM+S G + CG ++I S W LTAAHC G+ R +
Sbjct: 36 SRVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVAGIRNPRRYS 95
Query: 293 IIVRAGAVN-LTRPGLLFETTKYINHPEYSENL 388
+ V A ++ T+ +K +H +YS +L
Sbjct: 96 VYVGAHELDGTTQVEEKISISKIYSHEKYSSSL 128
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = +2
Query: 125 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGL--RVTII 298
PG+RIV+G EA +P+ S+R + + CGAT+I W +TAAHC + T+I
Sbjct: 322 PGARIVNGQEAVSHSWPWIASLRKGRS--NYHTCGATLIRPGWAITAAHCVMRPDKYTVI 379
Query: 299 VRAGAVNLTRPGLL-FETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFNDYI 457
V + + + + P + + H +S N V DI L++ R ND +
Sbjct: 380 VGSHSRDASEPSAQNIKVRRVYRHRGFS-MANYVD--DIALLELERSAVINDKV 430
Score = 50.8 bits (116), Expect = 8e-07
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +2
Query: 92 TFPEIARDRSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAH 271
+F + A R PG+R+++G A +P+Q+S+R G ++CG T+I W +TA+H
Sbjct: 15 SFVDAACGRKPPGARVINGQNAQPHSWPWQISLR---PYGRYHSCGGTLISDRWVVTASH 71
Query: 272 C 274
C
Sbjct: 72 C 72
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 52.4 bits (120), Expect = 3e-07
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Frame = +2
Query: 128 GSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC---TGLRVTII 298
G+RI++G EA +P+QLS+R V G + CGA+++ W LTAAHC +
Sbjct: 83 GTRIINGEEAVPNSWPWQLSLR----VYGSHNCGASLLSPGWALTAAHCVQRSSNPADYT 138
Query: 299 VRAGA---VNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFNDYIQPIR 469
+ AGA VN +L ++ I+H E+S + ++ +D+ L+ ++ +D I I
Sbjct: 139 LAAGAHRRVNDAHAQVL-RVSQVISHKEFS--MGHLR-NDVTLLRLSAPVQLSDKIGTIC 194
Query: 470 LQRSADK 490
L D+
Sbjct: 195 LPAHGDR 201
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 52.0 bits (119), Expect = 3e-07
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Frame = +2
Query: 110 RDRSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC----- 274
R R L I+ G A G++P+Q+S+++ S+ + CG +I W LTAAHC
Sbjct: 537 RVRPLAMPMIMGGANAEHGEWPWQVSMKLNSS-SLPHICGGNVISPWWVLTAAHCVQDER 595
Query: 275 -TGLRVTIIVRAGAVNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFND 451
+ +++T + N+ + + I+H YS N +D L+ R + F
Sbjct: 596 ASNIKLT-MGEWRLFNVDGTEQVIPVERIISHANYSYN---TVDYDYALLKLTRPLNFTQ 651
Query: 452 YIQPIRLQRS 481
Y+QP+ L S
Sbjct: 652 YVQPVCLPDS 661
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 51.6 bits (118), Expect = 4e-07
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Frame = +2
Query: 125 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC-TGLR----V 289
P SRIV G +A G++P+Q + + +G CG ++H +W +TA+HC +R
Sbjct: 207 PASRIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCINDIRPEDYK 266
Query: 290 TIIVRAGAVNLTRPGLL-----FETTKYINHPEYSENLNVVQ-PHDIGLIDFGRKIEFND 451
T I+ G N T G++ K H +Y NL Q +D+ LI +
Sbjct: 267 THIISLGGHNKT--GIMSVEQRIGIAKIYLHADY--NLYPHQYNNDVALIRLAKPAIRTR 322
Query: 452 YIQPIRL 472
Y+QP+ L
Sbjct: 323 YVQPVCL 329
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 51.2 bits (117), Expect = 6e-07
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +2
Query: 110 RDRSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGL-- 283
R P RIV+G +A +P+QLS R G + CGA+++ W LTAAHC L
Sbjct: 232 RSEKTPPLRIVNGEDAVPHSWPWQLSFRYK----GSHICGASLLTPGWALTAAHCLTLSD 287
Query: 284 -RVTIIVRAGAVNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFNDYIQ 460
+ AGA G +F +K H +S V +D+ L+ ++ +D +
Sbjct: 288 DASDYTLVAGAHQRENDGQVFGISKIRKHKGFS---MVHVRNDVALLKLSTYVQLSDKVG 344
Query: 461 PIRL 472
I L
Sbjct: 345 TICL 348
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 51.2 bits (117), Expect = 6e-07
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 13/128 (10%)
Frame = +2
Query: 134 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRVTIIVRAGA 313
R+V G EA GQFP+Q+++ CG ++H W +T AHC + R
Sbjct: 28 RVVGGDEAKAGQFPWQIALLFKRQ----QYCGGALVHERWVVTGAHCFNPYTSEDPRDWN 83
Query: 314 VNLTRPGLL----FETTKYIN----HPEYS----ENLNVVQP-HDIGLIDFGRKIEFNDY 454
V L L FE + + H Y E + P DI LI+ R + FN +
Sbjct: 84 VTLGEYNLAVNESFEQRRGVKSITVHEHYKSMWFEGITDTPPMFDIALIELDRPVVFNFH 143
Query: 455 IQPIRLQR 478
+QPI + R
Sbjct: 144 VQPICIMR 151
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 50.8 bits (116), Expect = 8e-07
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Frame = +2
Query: 125 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRV--TII 298
P +RIV G A + +P+Q +R S G CG T++H + +TA+HC + ++
Sbjct: 20 PSTRIVGGTAAPKNAWPWQAQLRSAS---GFPFCGGTLVHPRFVVTASHCIDKKTPSSLR 76
Query: 299 VRAGAVNLTRPGLL----FETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFN 448
+R GA G F + I H YS +N+ +DI +I+ N
Sbjct: 77 IRLGAHRRAESGESTVQDFRVKRIIKHERYSNPVNLA--NDIAVIELEEPARLN 128
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 50.8 bits (116), Expect = 8e-07
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Frame = +2
Query: 116 RSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLR--- 286
R G+RI++G A +P+Q+S+R S G + CG ++I W +TAAHC
Sbjct: 99 RKPAGARIINGQNAQPHSWPWQISLRGRS---GFHTCGGSLISDRWVVTAAHCIHRNKNP 155
Query: 287 --VTIIVRAGAV-NLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFN 448
T++V A T ++ I HP+Y++ V +DI L++ ++F+
Sbjct: 156 GGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKYNDRRIV---NDIALLELATPVQFD 209
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 116 RSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAA 268
R G+RI++G A +P+Q+S+R S G + CG ++I W +TAA
Sbjct: 422 RKPAGARIINGQNAQPHSWPWQISLRGRS---GFHTCGGSLISDRWVVTAA 469
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +2
Query: 128 GSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
G+RIV G EA +P+Q +R + GG CG ++IH W LTAAHC
Sbjct: 257 GTRIVGGTEAPVNGWPWQAMLR---SAGGSQFCGGSLIHPEWVLTAAHC 302
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +2
Query: 128 GSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
G+RIV G EA +P+Q +R + GG CG ++IH W LTAAHC
Sbjct: 217 GTRIVGGTEAPVNGWPWQAMLR---SAGGSQFCGGSLIHPEWVLTAAHC 262
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 49.2 bits (112), Expect = 2e-06
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Frame = +2
Query: 131 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRVT--IIVR 304
SRIV G A G +P+Q +R + G + CG T++H W +TA+HC T + VR
Sbjct: 247 SRIVGGTTAQRGAWPWQAMLRYYN---GNHFCGGTLVHPRWVVTASHCVHKLTTGDLYVR 303
Query: 305 AGA---VNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFNDY 454
GA T F + HP Y + V +DI L+ R + Y
Sbjct: 304 MGAHWKDGKTGSEQDFRIQRIFMHPNY--HSPVQYANDIALLLLDRPARLDRY 354
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 49.2 bits (112), Expect = 2e-06
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Frame = +2
Query: 134 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRVTII----- 298
RIV G + +G +P+ + IR GG ACG ++I W LTAAHC R I
Sbjct: 107 RIVGGHDTVKGAYPWHVLIRK----GGHVACGGSLISEKWVLTAAHCVTHRNGNILPRSR 162
Query: 299 --VRAGAVNLTRPG----LLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFNDYIQ 460
V+ G T P L ++ HP++ +V+ D+ LI + ++Y++
Sbjct: 163 FQVQLGLYRTTLPNEPQVQLRNISEIRTHPQFD---HVLFDADLALIKLDGEAIISEYVR 219
Query: 461 PIRLQRSADK 490
PI L + D+
Sbjct: 220 PICLPETDDQ 229
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 49.2 bits (112), Expect = 2e-06
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Frame = +2
Query: 125 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLR--VTII 298
P SRIV G A G +P+Q+ M+ G CG T++ W +TAAHC + +I
Sbjct: 627 PLSRIVGGSTAPPGAWPWQV---MLIYNSGRQFCGGTLVTPEWVITAAHCVVDKNPASIQ 683
Query: 299 VRAGAVNLTRPGLLFETTKYI----NHPEYSENLNVVQPHDIGLIDFGR 433
VR GA + T P E I NHP+Y +DI L+ R
Sbjct: 684 VRLGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKR--SSNDIALLRLSR 730
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 48.0 bits (109), Expect = 5e-06
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 5/125 (4%)
Frame = +2
Query: 131 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC--TGLRVTIIVR 304
SR+VSG +A+ G++P+Q + V+ G V CG ++I W LTA HC T V
Sbjct: 60 SRVVSGDDATLGEWPWQAWLH-VTPHGFV--CGGSLIAPQWVLTAGHCILTEDPEKYRVV 116
Query: 305 AGAVNL-TRPG--LLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFNDYIQPIRLQ 475
G V+ T G +F + I HP YS +V +D+ L+ R ++ + L
Sbjct: 117 LGDVDRDTTEGSEQIFHVRRIIKHPHYSR--DVPYDNDVALLQLSRPAFVTSFVNTVCLP 174
Query: 476 RSADK 490
+K
Sbjct: 175 AQEEK 179
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +2
Query: 125 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRVTIIVR 304
P +RIV G A + +P+Q +R T G CG ++IH W LTA HC + +
Sbjct: 50 PHTRIVGGTAAKQNSWPWQAQLR---TTSGFPYCGGSLIHPQWILTATHCVSGKSASSIV 106
Query: 305 AGAVNL 322
VNL
Sbjct: 107 IRNVNL 112
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Frame = +2
Query: 131 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTG-----LRVTI 295
SR++ G +A G +P+Q++++ G CG +++ S W +TAAHC + I
Sbjct: 475 SRVIGGKDAIPGAWPWQIALKS----RGNFICGGSLVSSTWVVTAAHCVARSSNPAQYQI 530
Query: 296 IVRAGAVNLTR-PGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFNDYIQPIRL 472
IV N+ K I HP+Y+ N +DI LI+ + + + P+ L
Sbjct: 531 IVGEHNRNVNEVTEETLNVKKVIAHPQYN---NPRLSNDIALIELASPAKLSSRVNPVCL 587
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 128 GSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
G+R++ G +A+ +P+Q+S+R V G + CG T+I +W LTA HC
Sbjct: 433 GARVIGGEDAAPHSWPWQISLR----VRGKHMCGGTLISPDWVLTAGHC 477
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 116 RSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
R G+RI++G A +P+Q+S+R + CG +I W +TA+HC
Sbjct: 839 RKPAGARIINGQNAQPHSWPWQISLRQGRRF---HLCGGALISDRWVVTASHC 888
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 45.6 bits (103), Expect = 3e-05
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Frame = +2
Query: 131 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC-----TGLRVTI 295
SR+V+G A + +P+Q+S+R V G + CG ++I +W +TAAHC T T+
Sbjct: 30 SRVVNGDNAQQHSWPWQISLR----VNGRHICGGSLIAKDWVVTAAHCVDRNPTPSGYTV 85
Query: 296 IVRA-GAVNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFNDYIQPIRL 472
+V A T F + H ++S +DI L+ ++ +D + + L
Sbjct: 86 VVGAHHRTGNTPVQNTFRLKQLFKHEQFSMR---HLKNDIALLQLHEPVKASDKVNTVCL 142
Query: 473 QRSADK 490
S +
Sbjct: 143 PSSGSR 148
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 45.6 bits (103), Expect = 3e-05
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Frame = +2
Query: 38 IFLVAFVGGQALADDTDFTFPEIARDRSLPGSRI----VSGWEA----SEGQFPYQLSIR 193
+F+ V G+++ + T T+ ++ + +PG R+ +S A S+ +P+Q+++
Sbjct: 1200 VFVRLVVSGRSVTEVT-MTYEHVSLTK-IPGKRLKDVNLSALAACGVRSDDSWPWQVALT 1257
Query: 194 MVSTVGGVNACGATIIHSNWGLTAAHC---TGLRVTIIVRAGAVNLTR---PGLLFETTK 355
+ V CG +I ++W LTAAHC + V+ G ++ R G
Sbjct: 1258 LSGNP--VQRCGGALIAADWVLTAAHCFDRFSMPPEWTVQVGVSDMRRRDGKGQSLSIKA 1315
Query: 356 YINHPEYSENLNVVQPHDIGLIDFGRKIEFNDYIQPI 466
HP+Y+ + + HD+ ++ + EFN + PI
Sbjct: 1316 IFVHPQYNSSSH---EHDLAVLQLQQPAEFNSRVSPI 1349
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +2
Query: 131 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
SR+V+G A++ +P+Q+S+R V G + CG ++I W LTAAHC
Sbjct: 79 SRVVNGDNAAQHSWPWQISLR----VNGRHICGGSLITPEWVLTAAHC 122
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +2
Query: 116 RSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
R P SR++ G A +P+Q+S+ M G +++CG +I S W +TAAHC
Sbjct: 470 RRPPMSRVIGGEAARPYSWPWQVSVSM----GKLHSCGGALISSKWVITAAHC 518
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 134 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
RIV G EA+ G +P+Q+++ M G CG ++++ NW +TA HC
Sbjct: 53 RIVGGVEAAPGAWPWQVALLM----NGTQFCGGSLVNENWVVTARHC 95
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 44.8 bits (101), Expect = 5e-05
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Frame = +2
Query: 200 STVGGVNACGATIIHSNWGLTAAHC-----TGLRVTIIVRAGAVNLTRPGLLFETTKYIN 364
+T+ G + CG +++ S W LTAAHC T+IV GA G + + +
Sbjct: 332 ATLNGHHICGGSLLSSTWVLTAAHCVIRSHNTSDYTVIV--GAHKRVLDGTEHKLSAFYK 389
Query: 365 HPEYSENLNVVQPHDIGLIDFGRKIEFNDYIQPIRLQRSADKNRNYDN 508
H +Y + + HD+ LI + F+ + P+ L + D N N
Sbjct: 390 HEKYVGGKD--KKHDLALIRLAKPAAFSAKVSPVCLPKQGDLLGNEKN 435
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 131 SRIVSGWEASEGQFPYQLSIRMVSTVGG-VNACGATIIHSNWGLTAAHC 274
+RIV G EA G +P+Q+ I G + CG +I+ W LTAAHC
Sbjct: 125 ARIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHC 173
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 44.4 bits (100), Expect = 7e-05
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Frame = +2
Query: 134 RIVSGWEASEGQFPYQLSIRMVSTVGGVNA--CGATIIHSNWGLTAAHCT---------- 277
RI G ++ G +P+Q+++ + N CG T+I +W LTAAHC
Sbjct: 1160 RIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCVVYKDSGIPYH 1219
Query: 278 GLRVTIIVR-AGAVNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFNDY 454
GLRV + V A ++ + + +HP +S DI LI K +Y
Sbjct: 1220 GLRVFLGVHDITARHMDEHVQIIPSAGIYSHPRFSWR---TYDSDIALIRLRWKANITEY 1276
Query: 455 IQPIRL 472
++P+ L
Sbjct: 1277 VRPVCL 1282
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 122 LPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
+P +R++SG EA G++P+Q + + T G + CG +++ W LTAAHC
Sbjct: 27 VPATRVISGSEALLGEWPWQAWLHLQHT-GFI--CGGSLVAPGWVLTAAHC 74
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +2
Query: 131 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
SR+V+G A + +P+Q+S+R G + CG ++I W LTAAHC
Sbjct: 36 SRVVNGANAPQHAWPWQISLR----TNGQHICGGSLITPEWVLTAAHC 79
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Frame = +2
Query: 128 GSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTG--------- 280
G+RI+SG +A +P+ + I + CG T++ W +TAAHC
Sbjct: 349 GTRIISGSDAQPNSWPWMVQINY----NNGHHCGGTLVSPQWVVTAAHCVDHVKDPKNYN 404
Query: 281 -LRVTIIVRAGAVNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFNDYI 457
L +T+ + + F + I HP+Y E + +DI LI + N Y+
Sbjct: 405 ELAITLGEHKRSAS-EGTEQRFSVARIIVHPQYFEPTAI--NNDIALIKLNKPARLNKYV 461
Query: 458 QPIRLQRSADK 490
L R ++
Sbjct: 462 NLACLPRQGEE 472
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +2
Query: 29 TVVIFLVAFVGGQALADDTDFTFPEIARDRSLPGSRIVSGWEASEGQFPYQLSIRMVSTV 208
T + F + FV QA + + + RS+ R+VSG E +P+Q+ +
Sbjct: 8 TFLGFCLIFVNVQARSARSIDIDSDKCGQRSILEKRVVSGSEVEPQSWPWQVHLLQSRDG 67
Query: 209 GGVNACGATIIHSNWGLTAAHC 274
++ CG +I W +TAAHC
Sbjct: 68 SFLHKCGGALIDREWVVTAAHC 89
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +2
Query: 128 GSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
GSRIV G EA +P+Q + + + G CG ++I W LTAAHC
Sbjct: 27 GSRIVGGTEAPINGWPWQAML--LRSPNGDQFCGGSLIDPGWVLTAAHC 73
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 125 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
P SRI+ G A+ +P+Q I + + CG T+I + W +TAAHC
Sbjct: 281 PMSRIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHC 330
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 134 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
RIV G E++ G +P+Q ++ + T + CG ++I S W +TAAHC
Sbjct: 26 RIVGGIESANGAWPWQAALFLNGTH---HRCGGSVIKSQWVVTAAHC 69
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 125 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
P SRIV G EA +P+Q+ I + + + CG ++I W LT++HC
Sbjct: 242 PESRIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHC 291
Score = 32.3 bits (70), Expect = 0.29
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
Frame = +2
Query: 224 CGATIIHSNWGLTAAHCT--------GLRVTIIVRAGAVNLTRPGLLFETTKYINHPEYS 379
CG +II +W +TA HC G RV + + + HP +
Sbjct: 10 CGGSIIDPHWVVTAGHCVVPWSPRAIGTRVLRFAEHDSSRMEGYEQYAIPDRIHLHPGFV 69
Query: 380 ENLNVVQP--HDIGLIDFGRKIEFNDYIQPIRL 472
V P +DI L+ + I+F+D IQPI L
Sbjct: 70 IG-GVSHPGYYDIALLHLAKPIQFSDRIQPICL 101
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +2
Query: 131 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
S I+ G +A+ G++P+Q+S+ + G V CG T++ S W LTAA C
Sbjct: 256 SNIIGGTDAAVGEWPWQVSLYLTH-YGPV--CGGTLLTSEWVLTAARC 300
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = +2
Query: 110 RDRSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
RD S RIV G EA G +P+ +I V G CG +I +W +TAAHC
Sbjct: 715 RDSSDKRFRIVGGREAKAGAWPWLAAIY----VKGSFRCGGALIARDWVVTAAHC 765
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 134 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
+IV G G +P+Q+ I T+G + CG +I++S W +TAAHC
Sbjct: 1782 QIVGGKVTEHGAWPWQVQIGY-KTMGHI--CGGSIVNSQWIVTAAHC 1825
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +2
Query: 113 DRSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
+ + P RIV G EAS +P+Q+ + +V+ G + CG ++I W +T+ HC
Sbjct: 242 ENNKPQPRIVGGREASPNSWPWQVDL-VVN--GTRHNCGGSLIDKQWVVTSGHC 292
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 37.1 bits (82), Expect = 0.010
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Frame = +2
Query: 134 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC-TGLRVTIIVRAG 310
RI+ G ++ Q P+ +++ + S ACG +++ +W +TAAHC R+ V AG
Sbjct: 40 RIMGGQRSTIEQHPWMVAMMLDSA----QACGGSLVPEDWIVTAAHCFDSNRLRWRVVAG 95
Query: 311 AVNLTRPGLLFETTKYINHPEYSENLNVVQ----PHDIGLIDFGRKIEFNDYIQPIRL 472
++ + HP+Y N+ ++ +D+ L+ + + PI L
Sbjct: 96 NDMPSKAVNTTGVSAIWRHPQYKSNIASLESGPCDYDVALVKLEKSVATTPKTVPICL 153
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 134 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
RIV G +SEG +P+Q+++ + C ++I + W +TA HC
Sbjct: 53 RIVGGVVSSEGLWPWQVALLLNDR----QVCAGSLIEARWIITAGHC 95
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 34.7 bits (76), Expect = 0.055
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 134 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 274
RIV G A +P+Q ++ + CG ++I+ W +TAAHC
Sbjct: 432 RIVGGQTAKVEDWPWQAGLK--KGLDDTIVCGGSLINREWVVTAAHC 476
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 34.3 bits (75), Expect = 0.072
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -2
Query: 280 TGAVSSCEPPVAMNDGGSAGVDSSHSTDHTNRELVRELAFTRLPS 146
T A+ +P +AM G S GV+ + ++ + R +++TRLPS
Sbjct: 1004 TAAIIQQDPAIAMAQGTSYGVEKASEVENEMTSVERVISYTRLPS 1048
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 30.7 bits (66), Expect = 0.89
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 341 FETTKYINHPEYSENLNVVQPHDIGLIDFGRKIEFNDYIQPIRLQRSA 484
++ Y HP YS + DI LI + + F DY++PI L +A
Sbjct: 191 YDAEMYKIHPHYSPDS---YDSDIALIRLAQPVTFTDYVKPICLPSAA 235
>SB_27305| Best HMM Match : MFMR (HMM E-Value=0.53)
Length = 823
Score = 30.7 bits (66), Expect = 0.89
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 45 WSRSSEVRRSPTTPISLSLKSLATVPCRV--LELYQDGRRVKASSLTSSRFVWSVLWEES 218
WS SE +SPT ++++ K A P LE+ D +R+ + TS SV +
Sbjct: 46 WSLESEEAQSPTFEVTITPKPPAESPTETEQLEIQNDVKRLSVDN-TSLESYHSV--QHD 102
Query: 219 TPAEP 233
TP EP
Sbjct: 103 TPTEP 107
>SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 834
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 81 TPISLSLKSLATVPCRVLELYQDGRRVKASSL--TSSRFVWSVLWEESTPAEPPS 239
TP+ +S +P +VL LY+ K+S L +SS + S L++ S P + S
Sbjct: 564 TPLQVSTPLQVLIPLQVLPLYKSSALYKSSPLYKSSSLYKSSPLYKSSPPYKSSS 618
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -2
Query: 250 VAMNDGGSAGVDSSHSTDHTNRELVRELAFTRLPS 146
+AM G S GV+ + ++ + R +++TRLPS
Sbjct: 779 IAMAQGTSYGVEKASEVENEMTSVERVISYTRLPS 813
>SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42)
Length = 870
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -2
Query: 223 GVDSSHSTDHTNRE--LVRELAFTRLPS*YNSRTRQGTVASDFRESEIGVVGERLTSDER 50
GV +H DH RE + E A +P + TR+ + D EIG+V T + R
Sbjct: 523 GVRITH--DHATREVWITYEQATREIPLAHEPATREERITHDHARREIGIVHGHTTREVR 580
>SB_58889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 240 MMVAPQALTPPTVLTIRIESW 178
+M +P TPPTV TIR ES+
Sbjct: 41 VMTSPPQATPPTVRTIRPESY 61
>SB_32678| Best HMM Match : HEAT (HMM E-Value=9.6e-18)
Length = 844
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = -2
Query: 274 AVSSCEPPVAMNDGGSAGVDSSHSTDHTNRELVRELAFTRLPS*YNSRTRQGTVASDFRE 95
A ++ E N GVDSS S DH +RE T S Y S T +D +
Sbjct: 288 ARTAAESTTYENTASDEGVDSSSSKDHAHRERGSSPEATTTDSGYISPPDMATEHADTCQ 347
Query: 94 S 92
S
Sbjct: 348 S 348
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 57 SEVRRSPTTPISLSLKSL---ATVPC-RVLELYQDGRRVKASSLTSSRFVWSVLWE 212
S V SP + SL +K TV C V+ELY + ++ SL ++ W VL E
Sbjct: 4780 SLVALSPDSKTSLLIKDKLVKVTVLCVEVVELYDERQKALDRSLNAAEVFWPVLLE 4835
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -2
Query: 358 VLSGLEEQAGAGQVHCSSSDDDCYTQTGAVSSCEPPVAMNDGGSAGVDSS-HSTDHTNRE 182
V +G +EQ Q++ +++ +G++ + E PV+ G GV SS +T + N+
Sbjct: 217 VTNGYQEQRTQSQINGITTNSKETEASGSMRAHETPVSRGRWGQGGVGSSGMATGNENKP 276
Query: 181 LVRELAFTR 155
+ F +
Sbjct: 277 GISSTGFVQ 285
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,416,855
Number of Sequences: 59808
Number of extensions: 337183
Number of successful extensions: 1121
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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