Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k21r
(759 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 25 0.50
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 23 2.6
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 23 3.5
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 22 4.6
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 22 4.6
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 22 4.6
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 22 4.6
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 22 4.6
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 22 4.6
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 6.1
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 8.1
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 8.1
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 25.4 bits (53), Expect = 0.50
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 404 NQLGQYQLYLVSLIADANTRSPPNKTPICLSEDTFCPQCRYRNT 535
N QYQ Y + L + + + TP SE +F Y NT
Sbjct: 179 NSPDQYQSYQILLPTPTCSEASSSPTPSHSSESSFSAASSYTNT 222
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 429 YNWYCPN*FTGSLRIIYLG 373
Y YCP +GS+R+ +LG
Sbjct: 667 YEDYCPTSNSGSVRMSHLG 685
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 647 GIRSCARNRRLECSIGC 697
GIR C +R+L S GC
Sbjct: 70 GIRPCVISRQLRVSHGC 86
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 478 NSNLSFRGYILSSMPLPKYEGHNNPP 555
NSN+ GY + P+ H+ PP
Sbjct: 71 NSNVLSNGYGYGNYYHPQLHSHHGPP 96
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 478 NSNLSFRGYILSSMPLPKYEGHNNPP 555
NSN+ GY + P+ H+ PP
Sbjct: 71 NSNVLSNGYGYGNYYHPQLHSHHGPP 96
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 461 RSPPNKTPICLSEDTFCPQ 517
R+PP +C+ D FC +
Sbjct: 159 RAPPCDPAVCVLPDCFCSE 177
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 269 NITLCCPVTCQNRNTC 316
N+ C P CQN TC
Sbjct: 222 NVDDCKPNPCQNGGTC 237
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +2
Query: 269 NITLCCPVTCQNRNTC 316
N+ C P C N TC
Sbjct: 260 NVDDCRPGACHNNGTC 275
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 478 NSNLSFRGYILSSMPLPKYEGHNNPP 555
NSN+ GY + P+ H+ PP
Sbjct: 71 NSNVLSNGYGYGNYYHPQLHSHHGPP 96
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 478 NSNLSFRGYILSSMPLPKYEGHNNPP 555
NSN+ GY + P+ H+ PP
Sbjct: 71 NSNVLSNGYGYGNYYHPQLHSHHGPP 96
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 557 GAKSIKTIWMC*LGNSC 607
G I T+W+C L N C
Sbjct: 728 GLVYIATVWICTLMNRC 744
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/39 (23%), Positives = 17/39 (43%)
Frame = -2
Query: 383 YILDRFMIFTNHTNKFEDEGGIDKYYDFDKLLDNIMLYW 267
Y++D +F + ++ ED + Y F+ YW
Sbjct: 292 YVIDTMYLFIHIRSRQEDTDTLVVIYTFNLFYLCFCFYW 330
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/39 (23%), Positives = 17/39 (43%)
Frame = -2
Query: 383 YILDRFMIFTNHTNKFEDEGGIDKYYDFDKLLDNIMLYW 267
Y++D +F + ++ ED + Y F+ YW
Sbjct: 248 YVIDTMYLFIHIRSRQEDTDTLVVIYTFNLFYLCFCFYW 286
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,975
Number of Sequences: 336
Number of extensions: 4758
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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