Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k20r
(755 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 71 1e-12
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 64 2e-10
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 59 4e-09
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 8e-09
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 58 8e-09
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 58 8e-09
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 57 2e-08
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 56 3e-08
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 49 5e-06
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 32 0.44
SB_20408| Best HMM Match : rve (HMM E-Value=0.0034) 31 1.3
SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_54020| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_45790| Best HMM Match : SERTA (HMM E-Value=2.8e-07) 29 3.1
SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_35277| Best HMM Match : WIF (HMM E-Value=9.8e-06) 29 4.1
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_7232| Best HMM Match : Lipase_chap (HMM E-Value=9.2) 29 4.1
SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0) 29 5.4
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 28 9.4
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 70.9 bits (166), Expect = 1e-12
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = -2
Query: 520 EKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 344
+KF++ LDV++F P+EIT K N + V G + +E GF S++F R Y LP G + +
Sbjct: 4 DKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEGVDES 62
Query: 343 DLVSTLSSDGVLTVTAPKRPPPNAGERIVPITK 245
+ + ++ DG+L V A K+ PP E P TK
Sbjct: 63 SISTRIAEDGMLHVEALKKSPPATTENKAPATK 95
Score = 65.3 bits (152), Expect = 5e-11
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = -2
Query: 559 ARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFIS-RQF 383
A E+ + KF + LDV F P+E+ VK + + V + E +EHGF + RQF
Sbjct: 85 ATTENKAPATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQF 142
Query: 382 TRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRP 284
R ++LP +++ LV L DGVL + A KRP
Sbjct: 143 NRHFVLPREVDMDTLVPRLGKDGVLYIEADKRP 175
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 63.7 bits (148), Expect = 2e-10
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = -2
Query: 520 EKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 344
+K E+ LDV+ + P+EI++K + + ++GKH+ + EHG+ + +F R Y LP G +V+
Sbjct: 38 DKVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKS-EGEHGYETSEFHRSYNLPDGVDVS 96
Query: 343 DLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPA 233
+ S ++ DG+L + A K P +V TG A
Sbjct: 97 TVSSRITGDGLLHIEALKAEPQETEVSLVG-ASTGSA 132
Score = 31.1 bits (67), Expect(2) = 0.10
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 379 RRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITK 245
R ++LP +++ LVS L DG L + A + P ER V I +
Sbjct: 161 RHFVLPKDVDMDSLVSRLGKDGKLYIEAKRILHPTPHERQVNILR 205
Score = 22.2 bits (45), Expect(2) = 0.10
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 520 EKFEVILDVQQFTPD 476
++F V LDV F+PD
Sbjct: 141 KRFTVTLDVSSFSPD 155
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 58.8 bits (136), Expect = 4e-09
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Frame = -2
Query: 562 LARQESSSTINLTKEKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQ 386
L + S + L ++ E+ LDV+++ P+EI+ K N V V+G+H + GF ++
Sbjct: 225 LDEEVSCRLVYLQLDELEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKE 283
Query: 385 FTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKR-PPPNAGE 266
F R + LP G E +++ + +S+ G L + A K P P+ GE
Sbjct: 284 FRRTFTLPEGVEASNVKTRISNHGQLHIEAMKALPGPDGGE 324
Score = 58.0 bits (134), Expect = 8e-09
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Frame = -2
Query: 523 KEKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 347
+ K E+ LDV+++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 62
Query: 346 NDLVSTLSSDGVLTVTAPKR-PPPNAGE 266
+++ + +S+ G L + A K P P+ GE
Sbjct: 63 SNVKTRISNHGQLHIEAMKALPGPDGGE 90
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = -2
Query: 520 EKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 341
+KF + +DV F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 340 LVSTLSSDGVLTVTAPKRPPP 278
L + L +G L A KR P
Sbjct: 156 LTTRLDKEGKLHFEAKKRNAP 176
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = -2
Query: 520 EKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 341
+KF + +DV F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 331 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 389
Query: 340 LVSTLSSDGVLTVTAPKRPPP 278
L + L +G L A KR P
Sbjct: 390 LTTRLDKEGKLHFEAKKRNAP 410
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 58.0 bits (134), Expect = 8e-09
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Frame = -2
Query: 523 KEKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 347
+ K E+ LDV+++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 62
Query: 346 NDLVSTLSSDGVLTVTAPKR-PPPNAGE 266
+++ + +S+ G L + A K P P+ GE
Sbjct: 63 SNVKTRISNHGQLHIEAMKALPGPDGGE 90
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = -2
Query: 520 EKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 341
+KF + +DV F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 340 LVSTLSSDGVLTVTAPKRPPP 278
L + L +G L A KR P
Sbjct: 156 LTTRLDKEGKLHFEAKKRNAP 176
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 58.0 bits (134), Expect = 8e-09
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Frame = -2
Query: 523 KEKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 347
+ K E+ LDV+++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEA 62
Query: 346 NDLVSTLSSDGVLTVTAPKR-PPPNAGE 266
+++ + +S+ G L + A K P P+ GE
Sbjct: 63 SNVKTRISNHGQLHIEAMKALPGPDGGE 90
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = -2
Query: 520 EKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 341
+KF + +DV F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 340 LVSTLSSDGVLTVTAPKRPPP 278
L + L +G L A KR P
Sbjct: 156 LTTRLDKEGKLHFEAKKRNAP 176
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 58.0 bits (134), Expect = 8e-09
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Frame = -2
Query: 523 KEKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 347
+ K E+ LDV+++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEA 62
Query: 346 NDLVSTLSSDGVLTVTAPKR-PPPNAGE 266
+++ + +S+ G L + A K P P+ GE
Sbjct: 63 SNVKTRISNHGQLHIEAMKALPGPDGGE 90
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = -2
Query: 520 EKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 341
+KF + +DV F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 340 LVSTLSSDGVLTVTAPKRPPP 278
L + L +G L A KR P
Sbjct: 156 LTTRLDKEGKLHFEAKKRNAP 176
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = -2
Query: 502 LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLS 323
LDV+++ P+EI+ K N V V+G+H + E GF ++F R + LP G + ++ S +S
Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRH-VNEGEFGFELKEFRRTFTLPEGIDPENVTSRIS 70
Query: 322 SDGVLTVTAPKR-PPPNA 272
+ G L + A K P P A
Sbjct: 71 NHGHLHIEARKALPKPEA 88
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = -2
Query: 523 KEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 344
++KF + +DV F P+ I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 95 EDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREVDMD 153
Query: 343 DLVSTLSSDGVLTVTAPKRPPP 278
L + L +G L A K P
Sbjct: 154 SLTTRLDKEGKLHFEAKKSVAP 175
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = -2
Query: 523 KEKFEVI-LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 347
+ K E+ LDV+++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 5 ENKLEIAKLDVREYRPEEISFKVENGVVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 63
Query: 346 NDLVSTLSSDGVLTVTAPKRPPPNAGER 263
+++ + +S+ G L + A K P G +
Sbjct: 64 SNVKTRISNHGQLHIEAMKALPEPDGAK 91
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/81 (32%), Positives = 45/81 (55%)
Frame = -2
Query: 520 EKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 341
+KF + +DV+ F P+ I V+ N ++V HE + + H + + F R++ILP +++
Sbjct: 97 DKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFILPREVDMDS 155
Query: 340 LVSTLSSDGVLTVTAPKRPPP 278
L + L +G L A KR P
Sbjct: 156 LTTRLDKEGKLHFEAKKRNAP 176
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = -2
Query: 571 RASLARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFI- 395
+A A +E+ S KF + LDV F P+E+ VK + + V + E +EHGF
Sbjct: 9 KAPPATKENQSAATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFT 66
Query: 394 SRQFTRRYILP 362
+RQF R ++LP
Sbjct: 67 ARQFNRHFVLP 77
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = -2
Query: 502 LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLS 323
L Q TP + + E K+EE DEHG I R+ T+ E + T++
Sbjct: 1165 LSTFQITPISQIPSSLTEKLQPETKYEEYVDEHGQIIRRTTKVKHTAVKQERTTVTKTVT 1224
Query: 322 SDGVLT 305
DGV T
Sbjct: 1225 RDGVTT 1230
>SB_20408| Best HMM Match : rve (HMM E-Value=0.0034)
Length = 887
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 385 FTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEAASSK 206
+TRR L + V+ +++G VT P RPP A ++ TK P P A
Sbjct: 446 YTRRRELAAAFTRTPAVNQRATEGTNDVTPPARPPLAAAQQ----TKDRPLAAPATALRA 501
Query: 205 PEQ 197
P Q
Sbjct: 502 PGQ 504
>SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -2
Query: 352 EVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQ 179
+++ +V+ S T T P G R V T QPE S + +QQQ ++Q
Sbjct: 142 KLSSIVTQSQSTSSGTQTKPATQSTGVGTRDVDATDGSSQTQPEGTSGEGDQQQEQQQ 199
>SB_54020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2431
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -2
Query: 352 EVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQ 179
+++ +V+ S T T P G R V T QPE S + +QQQ ++Q
Sbjct: 2303 KLSSIVTQSQSTSSGTQTKPATQSTGVGTRDVDATDGSSQTQPEGTSGEGDQQQEQQQ 2360
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -2
Query: 370 ILPTGYEVNDLVSTLSS--DGVLTVTAPKRPPP----NAGERIVPITKTGPAKQPEAASS 209
I+P G ++ ST S+ + +TV P PPP NA + P+T PAK P AA
Sbjct: 1654 IVPPGSVGSNASSTSSTKRNSPITVERPLSPPPPPVFNAWNK--PLTLVTPAKAPSAAMV 1711
Query: 208 KP 203
P
Sbjct: 1712 LP 1713
>SB_45790| Best HMM Match : SERTA (HMM E-Value=2.8e-07)
Length = 1213
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -2
Query: 364 PTGYEVNDLVSTL--SSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQ 191
P + + DL+ L + G L T PP+ I T T Q + S +P QQ
Sbjct: 771 PDSFSLQDLICGLLAQNQGTLPTTIMNNDPPSETTTIAVQTDTDKLYQDSSPSEEP--QQ 828
Query: 190 PREQ 179
P+E+
Sbjct: 829 PQEE 832
>SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1401
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 325 SSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSP 155
S DG L T P+ P P R+VP T+ A P + + +P + +VTSP
Sbjct: 962 SLDGTLA-TIPELPTPVPSPRLVPSTQPSQASSPNPQPCEVTRPRP---LPGLVTSP 1014
>SB_35277| Best HMM Match : WIF (HMM E-Value=9.8e-06)
Length = 587
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 283 PPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSP*P 149
PP + + I T QP A ++P+ QP+ + + + P P
Sbjct: 386 PPKEAPQTIDIPVTVEINQPNAQQARPQLNQPQSRNIYMTAPPIP 430
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = -2
Query: 340 LVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVT 161
LVS S T T+P+RPPP +P + P + P PR P++
Sbjct: 1812 LVSPQESQPSRTSTSPERPPPLV-THTIPSVISSPQYSASKGTLGPPPLIPRATASPVIQ 1870
Query: 160 S 158
S
Sbjct: 1871 S 1871
>SB_7232| Best HMM Match : Lipase_chap (HMM E-Value=9.2)
Length = 588
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -2
Query: 385 FTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEAASSK 206
+TRR L + V+ +++G VT P RPP A ++I K P P A
Sbjct: 455 YTRRRELAAVFTRTPAVNQRATEGTDDVTPPARPPLAAAQQI----KDRPLAVPATALRA 510
Query: 205 PEQQQPR 185
P Q + R
Sbjct: 511 PGQCKSR 517
>SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0)
Length = 1182
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 325 SSDGVLTVTAPKRPP-PNAGERIVPITKTGPAKQPEAASSKPEQ 197
SS G+L + PP P AG+ K PAK + + P+Q
Sbjct: 1035 SSSGILVIEGKSSPPKPAAGKTKKAPAKKAPAKSKKGSMPDPKQ 1078
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -1
Query: 494 SAIHSRRDHGQGVEQHGCRRRQARGETGRARLHFPSVHPPVHPADRIRGQRP-GQHVVFR 318
S H RR + + RRR++R R R PS H H R R + P +H R
Sbjct: 215 SPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSH-RSRSRSRSPRRRHSRSR 273
Query: 317 RRAHR 303
HR
Sbjct: 274 SPTHR 278
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/52 (28%), Positives = 19/52 (36%)
Frame = -2
Query: 301 TAPKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSP*PP 146
+AP +PPP G P G + P + P P P P PP
Sbjct: 940 SAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPP 991
>SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -2
Query: 565 SLARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTV 443
S A+Q +S +LT K EV + V Q TP E K SNN +
Sbjct: 396 SNAQQATSKEQHLTS-KGEVQVPVGQITPSEQASKTSNNAL 435
>SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2391
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -2
Query: 385 FTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEAASSK 206
+TRR L + V+ +++G VT RPP A ++I PA +P S+
Sbjct: 1769 YTRRRELAASFTRTPAVNQRATEGTDDVTPLARPPLAAAQQIKDRPLAVPASRPGQCKSR 1828
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -2
Query: 430 KHEEKQDEHGFISRQFTRRYIL 365
KHEE++D HG++ + T ++ L
Sbjct: 72 KHEEREDRHGYLKDKVTLQHAL 93
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = -3
Query: 360 PDTRSTTWSARCLPTACSPSRRRNDLHLMPAKGSYRSRKPDPXXXXXXXXXXXXXXSPAN 181
P R++ WS++ P SP+R ++ PA+ RS+ P
Sbjct: 662 PPRRTSRWSSQS-PDRRSPARIKSS----PARSRSRSQSASPRHSKSKSPALSKVQVKTE 716
Query: 180 KWCPSSPPL 154
K PS PP+
Sbjct: 717 KKTPSPPPI 725
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,013,897
Number of Sequences: 59808
Number of extensions: 455131
Number of successful extensions: 1641
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1633
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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