Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k20r
(755 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g12030.1 68418.m01406 17.7 kDa class II heat shock protein 17... 43 3e-04
At5g12020.1 68418.m01405 17.6 kDa class II heat shock protein (... 42 3e-04
At2g29500.1 68415.m03583 17.6 kDa class I small heat shock prote... 42 4e-04
At4g10250.1 68417.m01682 22.0 kDa ER small heat shock protein (H... 39 0.003
At5g51440.1 68418.m06377 23.5 kDa mitochondrial small heat shock... 38 0.010
At1g07400.1 68414.m00789 17.8 kDa class I heat shock protein (HS... 37 0.017
At1g53540.1 68414.m06074 17.6 kDa class I small heat shock prote... 36 0.022
At5g59720.1 68418.m07486 18.1 kDa class I heat shock protein (HS... 36 0.029
At4g25200.1 68417.m03627 23.6 kDa mitochondrial small heat shock... 36 0.038
At1g59860.1 68414.m06742 17.6 kDa class I heat shock protein (HS... 35 0.067
At2g02160.1 68415.m00152 zinc finger (CCCH-type) family protein ... 33 0.27
At1g63230.1 68414.m07147 pentatricopeptide (PPR) repeat-containi... 32 0.47
At2g15630.1 68415.m01790 pentatricopeptide (PPR) repeat-containi... 31 0.83
At1g45207.2 68414.m05186 remorin family protein Since this genom... 30 1.4
At5g17160.1 68418.m02010 expressed protein 29 2.5
At1g76770.1 68414.m08934 heat shock protein-related contains sim... 29 2.5
At3g07100.1 68416.m00845 protein transport protein Sec24, putati... 29 3.3
At2g41450.1 68415.m05121 GCN5-related N-acetyltransferase (GNAT)... 29 3.3
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 29 3.3
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 3.3
At1g54115.1 68414.m06169 cation exchanger, putative 29 3.3
At4g26910.3 68417.m03871 2-oxoacid dehydrogenase family protein ... 29 4.4
At4g26910.2 68417.m03873 2-oxoacid dehydrogenase family protein ... 29 4.4
At4g26910.1 68417.m03872 2-oxoacid dehydrogenase family protein ... 29 4.4
At4g21540.1 68417.m03112 diacylglycerol kinase family protein co... 29 4.4
At3g14860.2 68416.m01879 NHL repeat-containing protein contains ... 29 4.4
At3g14860.1 68416.m01878 NHL repeat-containing protein contains ... 29 4.4
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 29 4.4
At1g24540.1 68414.m03089 cytochrome P450, putative similar to GB... 28 5.8
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 28 7.7
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 7.7
>At5g12030.1 68418.m01406 17.7 kDa class II heat shock protein 17.6A
(HSP17.7-CII) identical to heat shock protein 17.6A
GI:3256075 from [Arabidopsis thaliana]
Length = 156
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Frame = -2
Query: 502 LDVQQFTPDEITVKASN-NTVVVEGKHEEKQDEHG---FISRQ-----FTRRYILPTGYE 350
+D+ DEI V+ N N +VV GK + E+ F+ + F R++ LP +
Sbjct: 61 VDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNAD 120
Query: 349 VNDLVSTLSSDGVLTVTAPKRPPP 278
+ + +S +DGVL VT PK PPP
Sbjct: 121 L-EKISAACNDGVLKVTIPKLPPP 143
>At5g12020.1 68418.m01405 17.6 kDa class II heat shock protein
(HSP17.6-CII) identical to 17.6 kDa class II heat shock
protein SP:P29830 from [Arabidopsis thaliana]
Length = 155
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Frame = -2
Query: 514 FEVILDVQQFTPDEITVKASNNTVVV---EGKHEEKQDEHGFISR------QFTRRYILP 362
+ ++D+ DEI V+ N+ V+V E + E K++E R +F R++ LP
Sbjct: 56 YAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLP 115
Query: 361 TGYEVNDLVSTLSSDGVLTVTAPKRPPP 278
++ D +S + DGVL VT K PPP
Sbjct: 116 ENADL-DKISAVCHDGVLKVTVQKLPPP 142
>At2g29500.1 68415.m03583 17.6 kDa class I small heat shock protein
(HSP17.6B-CI) contains Pfam PF00011: Hsp20/alpha
crystallin family; identified in Scharf, K-D., et al,
Cell Stress & Chaperones (2001) 6: 225-237.
Length = 153
Score = 41.9 bits (94), Expect = 4e-04
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Frame = -2
Query: 583 FRPWRASLARQESSSTINL------TKEKFEVILDVQQFTPDEITVKASNNTVV-VEG-K 428
F+ +S +E+S+ +N T E D+ +E+ V+ ++V+ + G +
Sbjct: 28 FKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGER 87
Query: 427 HEEKQDEHGFISR------QFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGE 266
H EK+D++ R QFTRR+ LP ++ D V +GVLTVT PK A
Sbjct: 88 HVEKEDKNDTWHRVERSSGQFTRRFRLPENVKM-DQVKAAMENGVLTVTVPKAETKKADV 146
Query: 265 RIVPIT 248
+ + I+
Sbjct: 147 KSIQIS 152
>At4g10250.1 68417.m01682 22.0 kDa ER small heat shock protein
(HSP22.0-ER) identical to endomembrane-localized small
heat shock protein GI:511795 from [Arabidopsis thaliana]
Length = 195
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Frame = -2
Query: 526 TKEKFEVILDVQQFTPDEITVKASNNTVV-VEG----KHEEKQDEHGFISR---QFTRRY 371
T E E++LD+ DE+ ++ N V+ V G + E+K D+ + R +F R++
Sbjct: 78 TAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQF 137
Query: 370 ILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNA-GERIVPI 251
LP ++ + + L +GVLT+ K P G R+V I
Sbjct: 138 KLPDNVDMESVKAKL-ENGVLTINLTKLSPEKVKGPRVVNI 177
>At5g51440.1 68418.m06377 23.5 kDa mitochondrial small heat shock
protein (HSP23.5-M) similar to heat shock 22 kDa
protein, mitochondrial precursor SP:Q96331 from
[Arabidopsis thaliana]; identified in Scharf, K-D., et
al,Cell Stress & Chaperones (2001) 6: 225-237.
Length = 210
Score = 37.5 bits (83), Expect = 0.010
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Frame = -2
Query: 523 KEKFEVI---LDVQQFTPDEITVKASNNTVVV--EGKHEEKQDEHGFISRQFTRRYILPT 359
KEK + + +D+ + +++ + NT+V+ EG+ EE +D G R+FT R LP
Sbjct: 114 KEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGD-GRRFTSRIELPE 172
Query: 358 GYEVNDLVSTLSSDGVLTVTAPK 290
D + +GVL V PK
Sbjct: 173 KVYKTDEIKAEMKNGVLKVVIPK 195
>At1g07400.1 68414.m00789 17.8 kDa class I heat shock protein
(HSP17.8-CI) similar to 17.5 kDa class I heat shock
protein SP:P04793 from [Glycine max]; contains Pfam
PF00011: Hsp20/alpha crystallin family
Length = 157
Score = 36.7 bits (81), Expect = 0.017
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Frame = -2
Query: 499 DVQQFTPDEITVKASNNTVV-VEGKH----EEKQDEHGFISR---QFTRRYILPTGYEVN 344
D+ +E+ V+ +++V+ + G+ EEKQD + R QF+R++ LP ++
Sbjct: 64 DLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKM- 122
Query: 343 DLVSTLSSDGVLTVTAPK 290
D V +GVLTVT PK
Sbjct: 123 DQVKASMENGVLTVTVPK 140
>At1g53540.1 68414.m06074 17.6 kDa class I small heat shock protein
(HSP17.6C-CI) (AA 1-156) identical to (17.6 kDa class I
heat shock protein (HSP 17.6) (AA 1-156)(SP:P13853)
(GI:4376161) (Arabidopsis thaliana) (Nucleic Acids Res.
17 (19), 7995 (1989))
Length = 157
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Frame = -2
Query: 499 DVQQFTPDEITVKASNNTVV-VEGK----HEEKQDEHGFISR---QFTRRYILPTGYEVN 344
D+ +E+ V+ + ++ + G+ +EEK D+ + R +FTRR+ LP ++
Sbjct: 66 DLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKME 125
Query: 343 DLVSTLSSDGVLTVTAPKRP 284
++ +++ +GVL+VT PK P
Sbjct: 126 EIKASM-ENGVLSVTVPKVP 144
>At5g59720.1 68418.m07486 18.1 kDa class I heat shock protein
(HSP18.1-CI) identical to 18.2 kDa class I heat shock
protein (HSP 18.2) (SP:P19037)[Arabidopsis thaliana];
contains Pfam profile: PF00011 Hsp20/alpha crystallin
family
Length = 161
Score = 35.9 bits (79), Expect = 0.029
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Frame = -2
Query: 499 DVQQFTPDEITVKASNNTVV-VEGK----HEEKQDEHGFISR---QFTRRYILPTGYEVN 344
D+ +E+ V+ + V+ + G+ +EEK D+ + R +F RR+ LP ++
Sbjct: 68 DLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKME 127
Query: 343 DLVSTLSSDGVLTVTAPKRP 284
++ +T+ + GVLTV PK P
Sbjct: 128 EVKATMEN-GVLTVVVPKAP 146
>At4g25200.1 68417.m03627 23.6 kDa mitochondrial small heat shock
protein (HSP23.6-M) contains Pfam profile PF00011:
Hsp20/alpha crystallin family
Length = 210
Score = 35.5 bits (78), Expect = 0.038
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = -2
Query: 523 KEKFEVI---LDVQQFTPDEITVKASNNTVVV--EGKHEEKQDEHGFI-SRQFTRRYILP 362
KEK + + +D+ + +++ + +T+V+ EGK+EE E G +R+FT R LP
Sbjct: 112 KEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLP 171
Query: 361 TGYEVNDLVSTLSSDGVLTVTAPK 290
D + +GVL V PK
Sbjct: 172 DKIYKIDEIKAEMKNGVLKVVIPK 195
>At1g59860.1 68414.m06742 17.6 kDa class I heat shock protein
(HSP17.6A-CI) similar to 17.5 kDa class I heat shock
protein SP:P04793 from [Glycine max]
Length = 155
Score = 34.7 bits (76), Expect = 0.067
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = -2
Query: 499 DVQQFTPDEITVKASNNTVV-VEGKH----EEKQDEHGFISRQ---FTRRYILPTGYEVN 344
D+ +E+ V+ +++V+ + G+ EEKQD + R F+R++ LP ++
Sbjct: 62 DLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKM- 120
Query: 343 DLVSTLSSDGVLTVTAPK 290
D V +GVLTVT PK
Sbjct: 121 DQVKASMENGVLTVTVPK 138
>At2g02160.1 68415.m00152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 669
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = -2
Query: 565 SLARQESSSTINL-TKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISR 389
+++++E+ I L T+EK EV+ + + +E TV +V E +E +DE +
Sbjct: 552 TISKEEAGDEIKLITEEKTEVVSEPKAEVEEEGTVMEEEE-IVGEEVYEGNEDEQAYEGD 610
Query: 388 QFTRRYILPTGYE 350
+ Y GYE
Sbjct: 611 ELNGEYYYEEGYE 623
>At1g63230.1 68414.m07147 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 323
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -2
Query: 493 QQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLV 335
+Q PD +T A N +V EGK E ++ +G RR I PT N ++
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIYG----DMLRRGIFPTTITYNSMI 188
>At2g15630.1 68415.m01790 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 627
Score = 31.1 bits (67), Expect = 0.83
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -2
Query: 502 LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLS 323
+D+ PD++T + EGK EE ++ G + RR I P N L+S S
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG----EMKRRGIKPDHISYNTLISGYS 548
Query: 322 SDG 314
G
Sbjct: 549 KKG 551
>At1g45207.2 68414.m05186 remorin family protein Since this genomic
sequence region is unfinished, the annotated gene may be
missing a stop codon or start codon
Length = 555
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +3
Query: 216 AASGCLAGPVFVIGTILSPALG---GGRFGAVTVSTPSEDNVLTRSLTS 353
A SG L P F ++ SPA+ GG G +T S+P VL +++S
Sbjct: 264 AKSGPLGPPGFAYYSLYSPAVPMVHGGNMGGLTASSPFSAGVLPETVSS 312
>At5g17160.1 68418.m02010 expressed protein
Length = 569
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/114 (19%), Positives = 45/114 (39%)
Frame = -2
Query: 496 VQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSSD 317
+ F + + + +++ ++ D G IS + + ++ G ++ D TLS
Sbjct: 380 INNFDEETMVDQTDSDSETEPEENHSGVDSDGTISEADSNQAVV--GSDIADEEMTLSGS 437
Query: 316 GVLTVTAPKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSP 155
TAP PP +++ T P ++ P +P + P+ SP
Sbjct: 438 EGSAATAPNSPPRLEEAKVIKTTLVSPFAVESISTQFP---RPSKSTTPLKNSP 488
>At1g76770.1 68414.m08934 heat shock protein-related contains
similarity to 17.9 kDa heat-shock protein [Helianthus
annuus] gi|11990130|emb|CAB55634
Length = 244
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -2
Query: 319 DGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQM 176
DG LTVT PK+ G +I + K+P E+ +P E++
Sbjct: 118 DGTLTVTMPKKVKGITGLKIEEEDEEEEMKEPIVEEKTEEKTEPEEEI 165
>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
similar to protein transport protein Sec24A
(SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
Length = 1038
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 280 PNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSP*PP 146
P+A + P T +GP P + +P Q P +P + P PP
Sbjct: 49 PSASQPTRPFTASGPPPAPPVGTMRPGQPSPFVSQIP-GSRPPPP 92
>At2g41450.1 68415.m05121 GCN5-related N-acetyltransferase (GNAT)
family protein low similarity to Swift [Xenopus laevis]
GI:14164561; contains Pfam profiles PF00583:
acetyltransferase, GNAT family, PF00533: BRCA1 C
Terminus (BRCT) domain
Length = 991
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 653 SEEGRSVILHQFIPLDLALQKFILQTLEGELSQAGIFFDDQF 528
S R +L F+PL LA F+LQ G +FDD +
Sbjct: 580 SSYSRKFLLITFLPLSLACLAFLLQWRSGVNDSVTQWFDDNY 621
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -2
Query: 295 PKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSP*PP 146
P PP P+T P P S P P P V SP PP
Sbjct: 47 PVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASPPPP 96
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -2
Query: 295 PKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSP*PP 146
P PP P+T P P S P P P V SP PP
Sbjct: 47 PVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASPPPP 96
>At1g54115.1 68414.m06169 cation exchanger, putative
Length = 644
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 204 GFEDAASGCLAGPVF--VIGTILSPALGGGRFGAVTVSTPSEDNVLTRSL 347
G + A SGC AGP+F ++G +S LG T P EDN L +L
Sbjct: 544 GVQIALSGCYAGPMFNTLVGLGMSMFLGAWSKSPETYMIP-EDNSLFYTL 592
>At4g26910.3 68417.m03871 2-oxoacid dehydrogenase family protein
similar to SP|P36957 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Homo sapiens}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 365
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -2
Query: 343 DLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGP-AKQPEAASS-KPEQQQPREQMVP 170
D S ++ + T +P P A ++ P ++ P A++P+A SS P +Q +E +P
Sbjct: 72 DTASQVTPSQKIPETTDTKPSPPAEDKQKPRVESAPVAEKPKAPSSPPPPKQSAKEPQLP 131
>At4g26910.2 68417.m03873 2-oxoacid dehydrogenase family protein
similar to SP|P36957 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Homo sapiens}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 463
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -2
Query: 343 DLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGP-AKQPEAASS-KPEQQQPREQMVP 170
D S ++ + T +P P A ++ P ++ P A++P+A SS P +Q +E +P
Sbjct: 170 DTASQVTPSQKIPETTDTKPSPPAEDKQKPRVESAPVAEKPKAPSSPPPPKQSAKEPQLP 229
>At4g26910.1 68417.m03872 2-oxoacid dehydrogenase family protein
similar to SP|P36957 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Homo sapiens}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 464
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -2
Query: 343 DLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGP-AKQPEAASS-KPEQQQPREQMVP 170
D S ++ + T +P P A ++ P ++ P A++P+A SS P +Q +E +P
Sbjct: 171 DTASQVTPSQKIPETTDTKPSPPAEDKQKPRVESAPVAEKPKAPSSPPPPKQSAKEPQLP 230
>At4g21540.1 68417.m03112 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 1240
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = -2
Query: 481 PDEITVKASNNTVVVEG-KHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSSDGVLT 305
PDE + SN + +G K +++G+ S + + P GY DL + VL
Sbjct: 66 PDETFPEISNCIGIAKGYKQNSNNEKNGYTSLEAVLLSV-PNGYTCVDLSLYKDKELVLL 124
Query: 304 VTAPKRPPPNAGERIVPITKTG 239
+ +GE + + +TG
Sbjct: 125 LNKTNTDSEGSGEACMMVVQTG 146
>At3g14860.2 68416.m01879 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 493
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/81 (18%), Positives = 36/81 (44%)
Frame = -2
Query: 397 ISRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEA 218
++ +F +++P ++ N + L ++ + P PI+++ A P+A
Sbjct: 327 LALEFITSHLVPARFQTNPNLRPLKDRLIMPEDEQEPPRVQRHTAPAPISESRHAHLPKA 386
Query: 217 ASSKPEQQQPREQMVPIVTSP 155
S PE + P+ + ++ P
Sbjct: 387 DDSYPEHKTPKLRSSSVMKDP 407
>At3g14860.1 68416.m01878 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 492
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/81 (18%), Positives = 36/81 (44%)
Frame = -2
Query: 397 ISRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEA 218
++ +F +++P ++ N + L ++ + P PI+++ A P+A
Sbjct: 326 LALEFITSHLVPARFQTNPNLRPLKDRLIMPEDEQEPPRVQRHTAPAPISESRHAHLPKA 385
Query: 217 ASSKPEQQQPREQMVPIVTSP 155
S PE + P+ + ++ P
Sbjct: 386 DDSYPEHKTPKLRSSSVMKDP 406
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = -2
Query: 337 VSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTS 158
+S L + LT + PK+ P + P+ GP A +S P P + + I++
Sbjct: 514 ISFLPTLHPLTSSQPKKASPQCPQSPTPVHSNGPPSAEAAVTSSP---LPPLKPLRILSR 570
Query: 157 P*PP 146
P PP
Sbjct: 571 PPPP 574
>At1g24540.1 68414.m03089 cytochrome P450, putative similar to
GB:AAB87111, similar to ESTs dbj|D41610, gb|T20562 and
emb|Z26058
Length = 522
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 282 GGRFGAVTVSTPSEDNVLTRSLTSYPVGRMYR 377
GG +G +T + +++L + +YP G YR
Sbjct: 85 GGAYGIMTADPANVEHILKTNFKNYPKGAFYR 116
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
Spastin (Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin
(Fragment) (Swiss-Prot:Q9QYY8) [Mus musculus]; similar
to mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -2
Query: 298 APKRPPPNAGERIVPITKTGPAKQPEAASSKPE----QQQPREQMVPIVTSP*P 149
A P ++ VPI GPA P + S +PE Q + P+VT+ P
Sbjct: 47 ATAEPAGSSSASEVPIENQGPASDPGSESGEPELGSSDPQAMDAEKPVVTTDVP 100
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -2
Query: 295 PKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPR-EQMVPIVTSP*PP*CRAQRPK 122
PK P P + ++ P T+ K P+Q+ P+ EQ P SP + + PK
Sbjct: 460 PKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESSKQEPPK 518
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,215,501
Number of Sequences: 28952
Number of extensions: 305716
Number of successful extensions: 1166
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1682736544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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