Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k16r
(414 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_28064| Best HMM Match : DUF1174 (HMM E-Value=4.5) 35 0.030
SB_30502| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.070
SB_55828| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.50
SB_2181| Best HMM Match : RGS (HMM E-Value=0.11) 31 0.50
SB_53555| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.66
SB_31190| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.87
SB_18132| Best HMM Match : Collagen (HMM E-Value=1.2) 30 0.87
SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39) 30 0.87
SB_34084| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.87
SB_54863| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_3972| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_29545| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_22690| Best HMM Match : Collagen (HMM E-Value=0.042) 28 2.6
SB_7209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_30232| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_29957| Best HMM Match : Pro_racemase (HMM E-Value=0) 27 4.6
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_16967| Best HMM Match : Laminin_EGF (HMM E-Value=0) 27 4.6
SB_3002| Best HMM Match : Pkinase (HMM E-Value=4.1e-17) 27 4.6
SB_13987| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_50605| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_50361| Best HMM Match : RNA_pol_delta (HMM E-Value=2.2) 27 6.1
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 27 6.1
SB_17446| Best HMM Match : Vicilin_N (HMM E-Value=2.2) 27 6.1
SB_9856| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_51901| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_27613| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_23569| Best HMM Match : PAN (HMM E-Value=0.0015) 27 8.1
SB_58120| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_51678| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 27 8.1
SB_45099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_27583| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_20027| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 37.5 bits (83), Expect = 0.004
Identities = 28/95 (29%), Positives = 44/95 (46%)
Frame = +3
Query: 105 DSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGIS 284
+SGS + R TNN ++ G G +GF N +G +NN G GN NG +
Sbjct: 376 NSGSSNGRNTNNGNNNNAGTSNVGN-NGFTNNGVNN-NNGNSNNGGNDKGGNT---NGGN 430
Query: 285 GNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSN 389
N G ++ + G + G+++ G N G +N
Sbjct: 431 NNGGNNGGNNNGGNTGGDNNGGNNYGGNNNGGNNN 465
Score = 34.7 bits (76), Expect = 0.030
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +3
Query: 96 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNIN 275
G +++G ++ G NN G ++ GE+ G +G N G+ +NN G GN N
Sbjct: 515 GGNNNGGNNNGGNNNGG-NNNGENNGGNNNGGNNGGSNNGGNDGSNNNGGNTGGNNNGGN 573
Query: 276 GISGNLGRTVHVDDDLDEGSAISAGDS-HRGTFNNGRSNRDGLVGVN 413
N G T ++ + G + G++ N G +N G G N
Sbjct: 574 TGGNNGGNTGGNNNGGNTGGNNNGGNTGGNNGGNTGGNNNGGNTGGN 620
Score = 30.7 bits (66), Expect = 0.50
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = +3
Query: 96 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNF-GQRLFGNVLNI 272
G +++G ++ G +N G G D+ G +G N G+ N G GN
Sbjct: 402 GFTNNGVNNNNGNSNNG----GNDKGGNTNGGNNNGGNNGGNNNGGNTGGDNNGGNNYGG 457
Query: 273 NGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDG 398
N GN V ++ + + G ++ G NNG +N G
Sbjct: 458 NNNGGN--NNVGNNNGGNNNGGNNNGGNNNGGNNNGGNNNGG 497
>SB_28064| Best HMM Match : DUF1174 (HMM E-Value=4.5)
Length = 404
Score = 34.7 bits (76), Expect = 0.030
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Frame = +3
Query: 78 GSVEGLGKSDSGSRDDRGTNNYGLDDFGEDRAGEL-HGF-RNVDFRKYGSGENNNFGQRL 251
G +G G+ D+G ++G YG G GE G N +YG+G N G
Sbjct: 41 GGNKGKGEYDTGLGGNKGIGEYGTGLAGNKGIGEYGTGLGGNKGIGEYGTGLAGNKGIGE 100
Query: 252 FGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGL 401
+G L N G G + + + E AG+ G + G + G+
Sbjct: 101 YGTGLGGNKGIGEYGTGLGGNKGIGEYGTGLAGNKGMGEYGTGLAGNKGI 150
Score = 29.9 bits (64), Expect = 0.87
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 3/111 (2%)
Frame = +3
Query: 78 GSVEGLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGF---RNVDFRKYGSGENNNFGQR 248
G +G+G+ +G ++G YG G GE HG N +YG+G N G
Sbjct: 203 GGNKGIGEHGTGLGGNKGIGEYGTGLGGNKGIGE-HGTGLGGNKGIGEYGTGLGGNKGIG 261
Query: 249 LFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGL 401
+G L N G G + + E G+ + + G + G+
Sbjct: 262 EYGTGLGGNKGIGEHGTGLGGNKGKGEYGTGLGGNKGKCEYGTGLAGNKGI 312
Score = 29.1 bits (62), Expect = 1.5
Identities = 25/105 (23%), Positives = 39/105 (37%)
Frame = +3
Query: 87 EGLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVL 266
+G+G+ +G ++G YG G GE YG+G N G G L
Sbjct: 310 KGIGEHGTGLAGNKGIGEYGTGLGGNKGKGE-----------YGTGLGGNKGIGEHGTGL 358
Query: 267 NINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGL 401
N G G + + +DE G+ +G + G G+
Sbjct: 359 AGNKGKGEYGTGLGGNKGIDEYGTGLGGNKGKGEYGTGLGGNKGI 403
Score = 26.6 bits (56), Expect = 8.1
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +3
Query: 78 GSVEGLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHG---FRNVDFRKYGSGENNNFGQR 248
G +G+G+ +G ++G YG G GE HG N +YG+G G
Sbjct: 119 GGNKGIGEYGTGLAGNKGMGEYGTGLAGNKGIGE-HGTGLAGNKGIGEYGTGLGGTKGMG 177
Query: 249 LFGNVL 266
+G L
Sbjct: 178 EYGTGL 183
>SB_30502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 33.5 bits (73), Expect = 0.070
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 261 VLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVG 407
V+ ING+ G+ + DDD G +SA DS N+ ++RD + G
Sbjct: 25 VMMINGVGGDGSDDGYGDDDDGSGGGLSAKDSDNNNDNDYNNSRDYICG 73
>SB_55828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 32.7 bits (71), Expect = 0.12
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +3
Query: 216 GSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRD 395
GSG+++ G G+ + +G SG+ V DDD GS S+ D G NNG S+ D
Sbjct: 126 GSGDDDGGGSGSGGS--SDDGGSGDNNNGVSSDDDDGSGSGGSSDDGGSGDNNNGVSSSD 183
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 30.7 bits (66), Expect = 0.50
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +3
Query: 204 FRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGR 383
F +G G++N G GN + G + DDD D G GDS G F N R
Sbjct: 112 FNNFGHGDHNRGGN---GNSFKFS--FGGFDDFFNDDDDDDFGGGFGHGDSFFGNFGNFR 166
Query: 384 SN 389
++
Sbjct: 167 NS 168
>SB_2181| Best HMM Match : RGS (HMM E-Value=0.11)
Length = 1313
Score = 30.7 bits (66), Expect = 0.50
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 324 DEGSAISAGDSHRGTFNNGRSNRDGLVGVN 413
DE +SA DS G NN +RDG+VG N
Sbjct: 286 DEDDVVSANDSD-GNDNNDNIDRDGVVGAN 314
>SB_53555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 30.3 bits (65), Expect = 0.66
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Frame = +3
Query: 78 GSVEGLGKSDSGSR--DDRGTNNYGLDDFGEDRA-----GELHGFRNVDFRKYGSGENNN 236
G LGK D DD G+ + G DD + A G+L +V G G + +
Sbjct: 119 GGSGDLGKDDHARELADDGGSGDLGKDDHARELADSGGSGDLGKDDHVRKLPDGGG-SGD 177
Query: 237 FGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAG-DSH-RGTFNN 377
G+ L +G SG+LG+ HV + D G + G D H R +N+
Sbjct: 178 LGKDDHVRELADDGGSGDLGKDDHVRELADSGGSGDLGKDDHVRKLYNH 226
Score = 27.1 bits (57), Expect = 6.1
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 105 DSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGIS 284
D G D G +++ + + +G+L G + SG + + G+ L G S
Sbjct: 117 DGGGSGDLGKDDHARELADDGGSGDL-GKDDHARELADSGGSGDLGKDDHVRKLPDGGGS 175
Query: 285 GNLGRTVHVDDDLDEGSAISAG-DSH 359
G+LG+ HV + D+G + G D H
Sbjct: 176 GDLGKDDHVRELADDGGSGDLGKDDH 201
>SB_31190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.9 bits (64), Expect = 0.87
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = +3
Query: 81 SVEGLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGN 260
++E LG +D G D GL DFG ++ + DF + G FG
Sbjct: 10 NIEELGLTDFGVEQDDNIEELGLTDFGVEQNDNVEELGLTDFGVEQNDNIEELGLTDFGV 69
Query: 261 VLNINGISGNLGRT---VHVDDDLDE 329
N N LG T V DD+++E
Sbjct: 70 EQNDN--VEELGLTDFGVEQDDNIEE 93
Score = 27.9 bits (59), Expect = 3.5
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Frame = +3
Query: 81 SVEGLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGN 260
+VE LG +D G + GL DFG ++ + DF G FG
Sbjct: 42 NVEELGLTDFGVEQNDNIEELGLTDFGVEQNDNVEELGLTDFGVEQDDNIEELGLTYFGV 101
Query: 261 VLNIN----GISGNLGRTVHVDDDLDE 329
N N G+ G L V +D+++E
Sbjct: 102 EQNDNVEELGLDGFL--RVEQNDNVEE 126
>SB_18132| Best HMM Match : Collagen (HMM E-Value=1.2)
Length = 199
Score = 29.9 bits (64), Expect = 0.87
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Frame = +3
Query: 78 GSVEGLGKSDSGSR--DDRGTNNYGLDDFGEDRA-----GELHGFRNVDFRKYGSGENNN 236
G LGK D DD G+ + G DD + A G+L +V G G + +
Sbjct: 92 GGSGDLGKDDHARELADDGGSGDLGKDDHVRELADSGGSGDLGKDDHVRELPDGGG-SGD 150
Query: 237 FGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAG-DSH-RGTFNN 377
G+ L +G SG+LG+ HV + D+G + G D H R +N+
Sbjct: 151 LGKDDHVGELADDGGSGDLGKDDHVRELADDGGSGDLGKDDHVRKLYNH 199
Score = 27.5 bits (58), Expect = 4.6
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 105 DSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGIS 284
D G D G +++ + + +G+L +V SG + + G+ L G S
Sbjct: 90 DGGGSGDLGKDDHARELADDGGSGDLGKDDHVR-ELADSGGSGDLGKDDHVRELPDGGGS 148
Query: 285 GNLGRTVHVDDDLDEGSAISAG-DSH 359
G+LG+ HV + D+G + G D H
Sbjct: 149 GDLGKDDHVGELADDGGSGDLGKDDH 174
>SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39)
Length = 1024
Score = 29.9 bits (64), Expect = 0.87
Identities = 27/101 (26%), Positives = 34/101 (33%), Gaps = 5/101 (4%)
Frame = +3
Query: 108 SGSRDDRGTNNY----GLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNIN 275
SG+ DD G NY G DD +D G V Y G N + +
Sbjct: 71 SGNDDDNGDENYDDDGGSDDDHDDDNGNYDDDNGVGVGNYDDDNGVGVGNYDDDNGVGVG 130
Query: 276 GISGNLGRTV-HVDDDLDEGSAISAGDSHRGTFNNGRSNRD 395
+ G V + DDD G GD N G + D
Sbjct: 131 NYDDDNGVGVGNYDDDNGVGVGNYDGDGGNNNGNGGGKDED 171
Score = 27.5 bits (58), Expect = 4.6
Identities = 27/101 (26%), Positives = 46/101 (45%)
Frame = +3
Query: 111 GSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGN 290
G+ DD N G+ ++ +D + + + + G+ +++N G + GN G +
Sbjct: 108 GNYDD--DNGVGVGNYDDDNGVGVGNYDDDNGVGVGNYDDDN-GVGV-GNYDGDGGNNNG 163
Query: 291 LGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVN 413
G DD+ G A S GD++ NG S+ DG G N
Sbjct: 164 NGGGKDEDDNDGGGGADSNGDNNHDDDGNGVSDGDGGSGDN 204
>SB_34084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 29.9 bits (64), Expect = 0.87
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 105 DSGSRDDRGTNNYGLDDFGEDRAGE 179
D S DD G + G +D GED+ GE
Sbjct: 174 DKVSEDDMGVDKVGENDMGEDKVGE 198
>SB_54863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1251
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 258 NVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGL 401
N+ N + + RT DD D+ ++SAG+ T NG RDG+
Sbjct: 44 NIENSDASKLDRPRTFDTDDFTDKQMSLSAGEYWGSTDQNGVYRRDGI 91
>SB_3972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 29.5 bits (63), Expect = 1.1
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 78 GSVEGLGKSDSGSRDDRGTNNYGL-DDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLF 254
GS + + +G+ DD NN +D G D G H + N D GS E+ N
Sbjct: 108 GSNDNDDNNGNGNYDDNDNNNGACSNDNGNDNNGSYH-YGNDDNNGAGSYEDGNDDNNGA 166
Query: 255 GNVLNINGISGN 290
G+ + NG +G+
Sbjct: 167 GSYEDGNGDNGS 178
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 96 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGN 260
G + + D+ G NY +D +G N YG+ +NN G GN
Sbjct: 106 GDGSNDNDDNNGNGNYDDNDNNNGACSNDNGNDNNGSYHYGNDDNNGAGSYEDGN 160
>SB_29545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 28.7 bits (61), Expect = 2.0
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = +3
Query: 81 SVEGLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGN 260
++E LG +D G + GL DFG ++ + DF + G FG
Sbjct: 15 NIEELGLTDFGVEQNDNVEELGLTDFGVEQNDNIEELGLTDFGVEQNDNVEELGLTDFGV 74
Query: 261 VLNINGISGNLGRT---VHVDDDLDE 329
N N LG T V DD+++E
Sbjct: 75 EQNDN--IEELGLTDFGVEQDDNIEE 98
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/59 (25%), Positives = 22/59 (37%)
Frame = +3
Query: 81 SVEGLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFG 257
++E LG +D G + GL DFG ++ + DF G FG
Sbjct: 47 NIEELGLTDFGVEQNDNVEELGLTDFGVEQNDNIEELGLTDFGVEQDDNIEELGLTYFG 105
>SB_22690| Best HMM Match : Collagen (HMM E-Value=0.042)
Length = 593
Score = 28.3 bits (60), Expect = 2.6
Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 2/104 (1%)
Frame = +3
Query: 102 SDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGI 281
+D G G+N G DD +D + G + ++ G + +G
Sbjct: 7 ADGGVDGSDGSNGNGGDDDVDDADDGVDGSDGSNGNGGDDDGDDGDGGNCDDDDSGDDGS 66
Query: 282 SGNLGRTVHVDDDL--DEGSAISAGDSHRGTFNNGRSNRDGLVG 407
GN G DDD D+GS +AG+ ++G DG G
Sbjct: 67 DGNAGNGSDGDDDDSGDDGSDGNAGNGSDNDGSDGNGGEDGSDG 110
Score = 27.9 bits (59), Expect = 3.5
Identities = 29/107 (27%), Positives = 42/107 (39%)
Frame = +3
Query: 78 GSVEGLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFG 257
G + + +D G G+N G DD G+D G+ + D GS N G
Sbjct: 21 GGDDDVDDADDGVDGSDGSNGNGGDDDGDD--GDGGNCDDDDSGDDGSDGNAGNGSDGDD 78
Query: 258 NVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDG 398
+ +G GN G D+D +G+ G G N+G DG
Sbjct: 79 DDSGDDGSDGNAGN--GSDNDGSDGNGGEDGSDGAGD-NDGDDGSDG 122
>SB_7209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 27.9 bits (59), Expect = 3.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 96 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRK 212
G SDS +R+D G +N L + ED G+ G N R+
Sbjct: 583 GLSDSVTREDVGRSNDNLVNIVEDLTGKKEGNENAKGRE 621
>SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 27.5 bits (58), Expect = 4.6
Identities = 19/92 (20%), Positives = 36/92 (39%)
Frame = +3
Query: 120 DDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGR 299
D+ NN+G + + + N + S NNN + N N N+
Sbjct: 271 DNNSNNNHGNNKSNSNDHNNENNNNNSNNNDNNSNSNNNDNNSNNNDFNNSNRNDHNVDN 330
Query: 300 TVHVDDDLDEGSAISAGDSHRGTFNNGRSNRD 395
H +D+ ++ ++ D + NN +N+D
Sbjct: 331 NSHNNDEKNKSNSNDNNDENN---NNNSNNKD 359
>SB_30232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 78 GSVEGLGKSDSGSRDDRGTNNYGLDDFGEDRA-GELHGFRNVDFRKY 215
G + G D D G ++ G +DFG+D A G+ + +D +Y
Sbjct: 132 GGLVGEPMEDVKEEADSGNDDMGFEDFGDDDALGDADALQALDEAEY 178
>SB_29957| Best HMM Match : Pro_racemase (HMM E-Value=0)
Length = 576
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 102 SDSGSRDDRGTNNYGLDDFGEDRAGE 179
+DSG DD G+++ DD G+D +G+
Sbjct: 149 NDSGDGDDGGSDDQCNDDSGDDDSGD 174
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 27.5 bits (58), Expect = 4.6
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 16/122 (13%)
Frame = +3
Query: 90 GLGKSDSGSRDDRGTNNYGLDD-----------FGEDRAGELHGFRNVDFRKY-----GS 221
G G+ D G +D+ +N LDD G D +GE R K GS
Sbjct: 602 GEGEPDEGDGEDQTASNTSLDDEKSNTIIREQSGGSDESGERSASRESGKLKAESDIDGS 661
Query: 222 GENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGL 401
GE+ G+ +G SG G + + + G + +G+S + +G S G
Sbjct: 662 GESGESGESGKSGESGESGESGESGESGESGESGESGESGESGESGE-SGESGESGESGE 720
Query: 402 VG 407
G
Sbjct: 721 SG 722
>SB_16967| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1706
Score = 27.5 bits (58), Expect = 4.6
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 228 NNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGR 383
N F RL ++ ++ + R + DLD A+ AGD R FN R
Sbjct: 1158 NKPFALRLNESIDEVSALVNKSSRAAATERDLDRALAVLAGDISR-VFNRTR 1208
>SB_3002| Best HMM Match : Pkinase (HMM E-Value=4.1e-17)
Length = 683
Score = 27.5 bits (58), Expect = 4.6
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 63 EYQ*AGSVEGLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVD 203
E Q + +V GKS DD G N+Y D FGE+ GE + VD
Sbjct: 280 EGQSSKNVTDAGKSHK-PHDDIG-NDYDDDQFGEEDPGEEYSNHRVD 324
>SB_13987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 27.1 bits (57), Expect = 6.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 81 SVEGLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNN 236
+VE LG +D G + GL DFG ++ + DF G +N+N
Sbjct: 60 NVEELGLTDFGVEQNDNVEELGLTDFGVEQNDNIEELGLTDF---GVEQNDN 108
Score = 27.1 bits (57), Expect = 6.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 81 SVEGLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNN 236
+VE LG +D G + GL DFG ++ + DF G +N+N
Sbjct: 108 NVEELGLTDFGVEQNDNVEELGLTDFGVEQNDNIEELGLTDF---GVEQNDN 156
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 81 SVEGLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNN 236
++E LG +D G + GL DFG ++ + DF G +N+N
Sbjct: 12 NIEELGLTDFGVEQNDNVEELGLTDFGVEQNDNIEELGLTDF---GVEQNDN 60
>SB_50605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 27.1 bits (57), Expect = 6.1
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 99 KSDSGSRDDRGTNNYG-LDDFGEDRAGELHGFRNVDFRKYGSGENNN 236
K D DD N+ +DD DR G+ G VD K + + NN
Sbjct: 315 KDDDDENDDDDENDADTVDDGNNDRDGDSDGVSVVDNNKDDTDKENN 361
>SB_50361| Best HMM Match : RNA_pol_delta (HMM E-Value=2.2)
Length = 240
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 87 EGLGKSDSGSRDDRGTNNYGLDDFGED 167
E G D DD G++N G DD G D
Sbjct: 143 ERKGSQDDEEPDDEGSDNDGSDDDGSD 169
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 325 TRGVPSAPV--TVTGAPSTMAGPTEMGS 402
T G P+ V T TGAP+T PT G+
Sbjct: 340 TTGAPATTVAPTTTGAPTTTGAPTTTGA 367
>SB_17446| Best HMM Match : Vicilin_N (HMM E-Value=2.2)
Length = 381
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 87 EGLGKSDSGSRDDRGTNNYGLDDFGED 167
E G D DD G++N G DD G D
Sbjct: 143 ERKGSQDDEEPDDEGSDNDGSDDDGSD 169
>SB_9856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 383 PAIVEGAP-VTVTGADGTPLVQIIINVNRPSEIAAD 279
P + E P V V G+ G PL+Q+ V RP E+ D
Sbjct: 47 PRVSERVPYVVVYGSPGLPLIQL---VKRPEEVLQD 79
>SB_51901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 96 GKSDSGSRDDRGTNNYGLDDFGED 167
G D DD G++N G DD G D
Sbjct: 1 GSQDDEEPDDEGSDNDGSDDDGSD 24
>SB_27613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 279 ISGNLGRTVHVDDDLDEGSAISAGDSHRG 365
+ G++G + VD D DE ++S+GDS G
Sbjct: 294 VFGSMGDDI-VDSDEDESGSLSSGDSEIG 321
>SB_23569| Best HMM Match : PAN (HMM E-Value=0.0015)
Length = 504
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +3
Query: 204 FRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGR 383
+R+Y NNN + N N + S N + +++ + S +++ T+NN
Sbjct: 415 YRRYKHLSNNNNNNNINNNNNNNSSSSNNNNNNNNNNNNTYNNNNSSNNNNNNNTYNNNN 474
Query: 384 SN 389
+N
Sbjct: 475 NN 476
>SB_58120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 96 GKSDSGSRDDRGTNNYGLDDFGED 167
G D DD G++N G DD G D
Sbjct: 1 GSQDDEEPDDEGSDNDGSDDDGSD 24
>SB_51678| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 351
Score = 26.6 bits (56), Expect = 8.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 177 PQPCPPRSRQARNCWYPYHPGSRC 106
P+ CP R + R C H +RC
Sbjct: 228 PESCPARGKDCRKCGAKNHFANRC 251
>SB_45099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 96 GKSDSGSRDDRGTNNYGLDDFGED 167
G D DD G++N G DD G D
Sbjct: 1 GSQDDEEPDDEGSDNDGSDDDGSD 24
>SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 26.6 bits (56), Expect = 8.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 177 PQPCPPRSRQARNCWYPYHPGSRC 106
P+ CP R + R C H +RC
Sbjct: 228 PESCPARGKDCRKCGAKNHFANRC 251
>SB_27583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 26.6 bits (56), Expect = 8.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 177 PQPCPPRSRQARNCWYPYHPGSRC 106
P+ CP R + R C H +RC
Sbjct: 228 PESCPARGKDCRKCGAKNHFANRC 251
>SB_20027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 96 GKSDSGSRDDRGTNNYGLDDFGED 167
G D DD G++N G DD G D
Sbjct: 1 GSQDDEEPDDEGSDNDGSDDDGSD 24
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,008,364
Number of Sequences: 59808
Number of extensions: 215000
Number of successful extensions: 1108
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 764823134
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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