Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k16r
(414 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX640924-1|CAE45962.1| 219|Homo sapiens hypothetical protein pr... 31 1.5
AB084281-1|BAD00088.1| 2228|Homo sapiens chimeric MOZ-ASXH2 fusi... 31 2.0
AB084279-1|BAD00086.1| 1435|Homo sapiens polycomb group protein ... 31 2.0
AB051472-1|BAB21776.2| 1505|Homo sapiens KIAA1685 protein protein. 31 2.0
AL591375-2|CAI12099.1| 1652|Homo sapiens NHS-like 1 protein. 29 4.6
AL391669-2|CAI14157.1| 1652|Homo sapiens NHS-like 1 protein. 29 4.6
AB037778-1|BAA92595.1| 836|Homo sapiens KIAA1357 protein protein. 29 4.6
DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein. 29 6.1
BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein. 29 6.1
BC007861-1|AAH07861.1| 199|Homo sapiens KIAA1450 protein protein. 29 6.1
AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein. 29 6.1
AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein. 29 6.1
AK022968-1|BAB14338.1| 440|Homo sapiens protein ( Homo sapiens ... 29 8.1
AB040883-1|BAA95974.1| 1139|Homo sapiens KIAA1450 protein protein. 29 8.1
>BX640924-1|CAE45962.1| 219|Homo sapiens hypothetical protein
protein.
Length = 219
Score = 31.1 bits (67), Expect = 1.5
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = -2
Query: 407 TYEPISVGPAIVEGAPVTVTGADGTPL-VQIIINVNRPSEIAAD-PVDVEDIAEEPLPEV 234
T P++ PA GAPV A P+ + +E AA+ PV VE AEEP P
Sbjct: 140 TATPVAAEPAA--GAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAE 197
Query: 233 VILPTPVFPE 204
P PE
Sbjct: 198 PATAKPAAPE 207
>AB084281-1|BAD00088.1| 2228|Homo sapiens chimeric MOZ-ASXH2 fusion
protein protein.
Length = 2228
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 398 PISVGPAIVEGAPVTVTGADGTPLVQIIINVNRPSEIAADPVDVE-DIAEEPLPEVVILP 222
P GPA++ GA ADGT ++ + N P+ A+ D +A P P +L
Sbjct: 1626 PSPTGPALISGASPVHCAADGTVELKAGPSKNIPNPSASSKTDASVPVAVTPSPLTSLLT 1685
Query: 221 TPVFPEI 201
T ++
Sbjct: 1686 TATLEKL 1692
>AB084279-1|BAD00086.1| 1435|Homo sapiens polycomb group protein
protein.
Length = 1435
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 398 PISVGPAIVEGAPVTVTGADGTPLVQIIINVNRPSEIAADPVDVE-DIAEEPLPEVVILP 222
P GPA++ GA ADGT ++ + N P+ A+ D +A P P +L
Sbjct: 833 PSPTGPALISGASPVHCAADGTVELKAGPSKNIPNPSASSKTDASVPVAVTPSPLTSLLT 892
Query: 221 TPVFPEI 201
T ++
Sbjct: 893 TATLEKL 899
>AB051472-1|BAB21776.2| 1505|Homo sapiens KIAA1685 protein protein.
Length = 1505
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 398 PISVGPAIVEGAPVTVTGADGTPLVQIIINVNRPSEIAADPVDVE-DIAEEPLPEVVILP 222
P GPA++ GA ADGT ++ + N P+ A+ D +A P P +L
Sbjct: 903 PSPTGPALISGASPVHCAADGTVELKAGPSKNIPNPSASSKTDASVPVAVTPSPLTSLLT 962
Query: 221 TPVFPEI 201
T ++
Sbjct: 963 TATLEKL 969
>AL591375-2|CAI12099.1| 1652|Homo sapiens NHS-like 1 protein.
Length = 1652
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 337 PSAPVTVTGAPSTMAGPTEMGS 402
PS PVT TGA ++A P ++GS
Sbjct: 1429 PSPPVTPTGAAPSLASPKQVGS 1450
>AL391669-2|CAI14157.1| 1652|Homo sapiens NHS-like 1 protein.
Length = 1652
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 337 PSAPVTVTGAPSTMAGPTEMGS 402
PS PVT TGA ++A P ++GS
Sbjct: 1429 PSPPVTPTGAAPSLASPKQVGS 1450
>AB037778-1|BAA92595.1| 836|Homo sapiens KIAA1357 protein protein.
Length = 836
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 337 PSAPVTVTGAPSTMAGPTEMGS 402
PS PVT TGA ++A P ++GS
Sbjct: 613 PSPPVTPTGAAPSLASPKQVGS 634
>DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.
Length = 2391
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 90 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKY--GSGENNNFGQ 245
G G S S G+N+ FG+ R G ++ F +Y GSG+++ FGQ
Sbjct: 1080 GSGSSQSSGYGQHGSNSGQTSGFGQHRPG---SGQSSGFGQYGSGSGQSSGFGQ 1130
>BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein.
Length = 660
Score = 29.1 bits (62), Expect = 6.1
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Frame = +3
Query: 96 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGF---RNVDFRKYGSGENNN--FGQRLFGN 260
G S S+ +R + +G D+ + GF R R G G N+ FG +G
Sbjct: 580 GGSRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFGGGGYGG 639
Query: 261 VLNINGISGN 290
N +G GN
Sbjct: 640 FYNSDGYGGN 649
>BC007861-1|AAH07861.1| 199|Homo sapiens KIAA1450 protein protein.
Length = 199
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 87 EGLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRL 251
E G+SD G +DRG+ N D D AG+L ++ +G+G G+RL
Sbjct: 2 EDEGESDKGFAEDRGSRN----DMAADIAGQLSHAADLGTASHGAGGTG--GRRL 50
>AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.
Length = 2391
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 90 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKY--GSGENNNFGQ 245
G G S S G+N+ FG+ R G ++ F +Y GSG+++ FGQ
Sbjct: 1080 GSGSSQSSGYGQHGSNSGQTSGFGQHRPG---SGQSSGFGQYGSGSGQSSGFGQ 1130
>AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.
Length = 2391
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 90 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKY--GSGENNNFGQ 245
G G S S G+N+ FG+ R G ++ F +Y GSG+++ FGQ
Sbjct: 1080 GSGSSQSSGYGQHGSNSGQTSGFGQHRPG---SGQSSGFGQYGSGSGQSSGFGQ 1130
>AK022968-1|BAB14338.1| 440|Homo sapiens protein ( Homo sapiens
cDNA FLJ12906 fis, clone NT2RP2004373. ).
Length = 440
Score = 28.7 bits (61), Expect = 8.1
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 96 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRL 251
G+SD G +DRG+ N D D AG+L ++ +G+G G+RL
Sbjct: 115 GESDKGFAEDRGSRN----DMAADIAGQLSHAADLGTASHGAGGTG--GRRL 160
>AB040883-1|BAA95974.1| 1139|Homo sapiens KIAA1450 protein protein.
Length = 1139
Score = 28.7 bits (61), Expect = 8.1
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 96 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRL 251
G+SD G +DRG+ N D D AG+L ++ +G+G G+RL
Sbjct: 814 GESDKGFAEDRGSRN----DMAADIAGQLSHAADLGTASHGAGGTG--GRRL 859
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,560,201
Number of Sequences: 237096
Number of extensions: 1021618
Number of successful extensions: 3132
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3129
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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