Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k15f
         (607 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          26   0.33 
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    23   3.1  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    23   3.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.4  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 538 SSSNARRPHDGWPSSRNDGSSSW 606
           S  N  R H G  SS + GS SW
Sbjct: 389 SGENNSRGHSGQSSSHHHGSKSW 411


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 228 AKNSEKLNLKIVKLQTEKKKELWVL 302
           ++  +K+  K+V+   + K E+WVL
Sbjct: 79  SEKQKKIADKVVQFLIDNKPEIWVL 103


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 228 AKNSEKLNLKIVKLQTEKKKELWVL 302
           ++  +K+  K+V+   + K E+WVL
Sbjct: 79  SEKQKKIADKVVQFLIDNKPEIWVL 103


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 476 WQDLEDPEVLRPGQCLYQQHEHFQAR 399
           W+D +DP+    G+  YQ      AR
Sbjct: 392 WEDTQDPQGCGAGKENYQTMSRDPAR 417


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 443  PGQCLYQQHEHFQA 402
            P  CL+++ EHF A
Sbjct: 1612 PKNCLFRKPEHFVA 1625


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 476 WQDLEDPEVLRPGQCLYQQHEHFQAR 399
           W+D +DP+    G+  YQ      AR
Sbjct: 392 WEDTQDPQGCGAGKENYQTMSRDPAR 417


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,760
Number of Sequences: 438
Number of extensions: 2257
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)