Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k14r
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    30   0.023
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    30   0.023
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.5  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    22   4.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.9  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 29.9 bits (64), Expect = 0.023
 Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
 Frame = +2

Query: 416 NQPGHRRPQLEH--RRCLRSLQNQPGHRRPQLEHRGFLRSLQSQPGNRHSQLE--LRHFL 583
           +QP H++  + +  ++     Q  P H++P ++ +      Q  PGN  + L   L  ++
Sbjct: 179 HQPHHQQQHMMYGGQQGANMHQQGPPHQQPPIQQQP--NQGQQPPGNTAAALPSPLYPWM 236

Query: 584 RSLQNQQGNRRCQREFQCQKSQRCLHFRSIQSRPRRV 694
           RS   ++  R+    +Q  + ++  HF    +R RR+
Sbjct: 237 RSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 273


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 0.023
 Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
 Frame = +2

Query: 416 NQPGHRRPQLEH--RRCLRSLQNQPGHRRPQLEHRGFLRSLQSQPGNRHSQLE--LRHFL 583
           +QP H++  + +  ++     Q  P H++P ++ +      Q  PGN  + L   L  ++
Sbjct: 181 HQPHHQQQHMMYGGQQGANMHQQGPPHQQPPIQQQP--NQGQQPPGNTAAALPSPLYPWM 238

Query: 584 RSLQNQQGNRRCQREFQCQKSQRCLHFRSIQSRPRRV 694
           RS   ++  R+    +Q  + ++  HF    +R RR+
Sbjct: 239 RSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 275


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +3

Query: 330 NWFIHDVHRGDL*IGVLNWSIDVVYE 407
           N+FI  +   DL +G++N   D++++
Sbjct: 60  NYFITHLALADLSVGLINVLTDIIWK 85


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 707 EVIQELALAGIELSENVDNVAIFDIEIPVDNVDF 606
           E+++ L    + L   VD V I +   P+D +DF
Sbjct: 30  EILKRLNRVVLILKVLVDQVMILETMTPLDFMDF 63


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 707 EVIQELALAGIELSENVDNVAIFDIEIPVDNVDF 606
           E+++ L    + L   VD V I +   P+D +DF
Sbjct: 90  EILKRLNRVVLILKVLVDQVMILETMTPLDFMDF 123


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 707 EVIQELALAGIELSENVDNVAIFDIEIPVDNVDF 606
           E+++ L    + L   VD V I +   P+D +DF
Sbjct: 90  EILKRLNRVVLILKVLVDQVMILETMTPLDFMDF 123


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 567 SFDIFYEVYRINREIDVVN 623
           S DI Y+V  +++ +D++N
Sbjct: 185 SVDISYDVPALSKYLDIIN 203


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 257 LDEDGNGLVIVDLP-IEAQPEDLEKAQLVDLPVENVAEPEDLSP 129
           L+ +G+ +  V +  ++  P++     LVD+  +   E EDL+P
Sbjct: 428 LNNEGSLVYNVQIENLKTTPDNTTFITLVDVSTKRRTELEDLTP 471


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,292
Number of Sequences: 336
Number of extensions: 3279
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)