Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k14r
(746 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) 46 4e-05
SB_41181| Best HMM Match : DUF164 (HMM E-Value=2.1) 40 0.002
SB_38786| Best HMM Match : HLH (HMM E-Value=1e-13) 34 0.14
SB_36252| Best HMM Match : IQ (HMM E-Value=2.7e-35) 33 0.19
SB_15354| Best HMM Match : NHL (HMM E-Value=4.4e-14) 32 0.43
SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11) 32 0.43
SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38) 31 0.75
SB_20631| Best HMM Match : KH_2 (HMM E-Value=3.7) 31 0.99
SB_54110| Best HMM Match : Hexapep (HMM E-Value=9.8e-14) 31 1.3
SB_4140| Best HMM Match : ANF_receptor (HMM E-Value=0.013) 31 1.3
SB_40039| Best HMM Match : F5_F8_type_C (HMM E-Value=6.2e-12) 30 2.3
SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06) 30 2.3
SB_49989| Best HMM Match : GRP (HMM E-Value=2.3) 29 3.0
SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_36906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_9507| Best HMM Match : Cadherin (HMM E-Value=0) 29 5.3
SB_56345| Best HMM Match : Integrin_alpha (HMM E-Value=0.00047) 28 7.0
SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66) 28 7.0
SB_36198| Best HMM Match : Kunitz_BPTI (HMM E-Value=3.6) 28 7.0
SB_53055| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_32544| Best HMM Match : Extensin_2 (HMM E-Value=0.0062) 28 7.0
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_51287| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_32223| Best HMM Match : SH3BP5 (HMM E-Value=0.12) 28 9.2
SB_31933| Best HMM Match : PAN (HMM E-Value=3.5e-08) 28 9.2
SB_41994| Best HMM Match : F-box (HMM E-Value=1.4e-06) 28 9.2
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 46.8 bits (106), Expect = 2e-05
Identities = 48/181 (26%), Positives = 72/181 (39%), Gaps = 9/181 (4%)
Frame = -1
Query: 638 DIEIPVDNVDFPVDSVNF-VENVEAPVENADFPA-DSVSFVENLDAPVEDADVLADSVNF 465
+ E PV + PV VE EAP E + P ++ + VE +AP+E+A+ + V
Sbjct: 1085 EAEAPVVETEEPVKEAEAPVEEAEAPAEETEEPVKEAEASVEITEAPIEEAEAPDERVES 1144
Query: 464 XXXXXXXXXXXXXXXXXXSFVDNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSE--V 291
V+ V+APVE+A V + E E E+ E E
Sbjct: 1145 SVEEAEAPEEEVKAP-----VEEVEAPVEEAVASVEEAEVPIEEAETQAEDTEGPVEDAE 1199
Query: 290 GSISWVEYPAE-----LDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENVAEPEDLSPV 126
S+ E P E +ED + P+EA P Q + PV+ P + + V
Sbjct: 1200 ASVQKAEAPVEETEAPFEEDEAPAEKTEKPVEAGP----SVQEAEAPVKETERPVEEAEV 1255
Query: 125 Q 123
Q
Sbjct: 1256 Q 1256
Score = 41.9 bits (94), Expect = 5e-04
Identities = 57/232 (24%), Positives = 91/232 (39%), Gaps = 17/232 (7%)
Frame = -1
Query: 707 EVIQELALAGIELSENVDNVAIFDIEIPVDNVDFPVDSVNFVEN-VEAPVEN------AD 549
E E A A +E +E + V + E V+ + PV+ +E EAPVEN A+
Sbjct: 917 EGTSEEADASVEKAETLV-VKMEQAEASVEETESPVEEAEVLEEEAEAPVENEAAVEEAE 975
Query: 548 FPAD----SVSFVENLDAPVEDADVLADSVNFXXXXXXXXXXXXXXXXXXSFVDNVDAPV 381
PA+ + + E +APVE+A+ L ++ + V+ V+AP+
Sbjct: 976 IPAEEHPQARTPAEETEAPVEEAEALGET--------PIEEAESPEEEVEATVEEVEAPI 1027
Query: 380 EDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQP 201
E+A V + E E + E E S+ E A +E + + E
Sbjct: 1028 EEAAASVEEAEVPIEKAETQPVDTEGQVENAETSFEEAEAADEETEEPVKEAEASFEEAE 1087
Query: 200 ----EDLEKAQLVDLPVENVAEP--EDLSPVQVVNPIVENSQSEYPGKRYPD 63
E E + + PVE P E PV+ VE +++ PD
Sbjct: 1088 APVVETEEPVKEAEAPVEEAEAPAEETEEPVKEAEASVEITEAPIEEAEAPD 1139
Score = 38.7 bits (86), Expect = 0.005
Identities = 40/168 (23%), Positives = 65/168 (38%), Gaps = 3/168 (1%)
Frame = -1
Query: 584 VENVEAPVENADFPA-DSVSFVENLDAPVEDADVLADSVNFXXXXXXXXXXXXXXXXXXS 408
V+ EA E A+ P ++ V+ +APVE+A+ A+
Sbjct: 1076 VKEAEASFEEAEAPVVETEEPVKEAEAPVEEAEAPAEETEEPVKEAEASVEITEAP---- 1131
Query: 407 FVDNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVI 228
++ +AP E + V +E V+ EE+E E S E ++E
Sbjct: 1132 -IEEAEAPDERVESSVEEAEAPEEEVKAPVEEVEAPVEEAVASVEEAEVPIEEAETQAED 1190
Query: 227 VDLPIEAQPEDLEKAQLVDLPVENVAEP--EDLSPVQVVNPIVENSQS 90
+ P+E ++KA + PVE P ED +P + VE S
Sbjct: 1191 TEGPVEDAEASVQKA---EAPVEETEAPFEEDEAPAEKTEKPVEAGPS 1235
Score = 38.3 bits (85), Expect = 0.007
Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 8/188 (4%)
Frame = -1
Query: 623 VDNVDFPVD-SVNFVENVEAPVENADFPA-DSVSFVENLDAPVEDADVLADSVNFXXXXX 450
V+ V+ PV+ + VE + P+E A+ A D+ E DA VE A+ L V
Sbjct: 885 VEEVEAPVEKAAASVEEAKVPMEEAETQAEDTEGTSEEADASVEKAETLV--VKMEQAEA 942
Query: 449 XXXXXXXXXXXXXSFVDNVDAPVE-DADLQVAPVNIVDEP-----VEKTNEEIENDSEVG 288
+ +APVE +A ++ A + + P E+T +E +G
Sbjct: 943 SVEETESPVEEAEVLEEEAEAPVENEAAVEEAEIPAEEHPQARTPAEETEAPVEEAEALG 1002
Query: 287 SISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVNPI 108
E + +E + V+ PIE +E+A ++P+E + PV
Sbjct: 1003 ETPIEEAESPEEEVEATVEEVEAPIEEAAASVEEA---EVPIEKA----ETQPVDTEGQ- 1054
Query: 107 VENSQSEY 84
VEN+++ +
Sbjct: 1055 VENAETSF 1062
Score = 36.3 bits (80), Expect = 0.026
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 2/152 (1%)
Frame = -1
Query: 584 VENVEAPVENADFPADSV-SFVENLDAPVEDA-DVLADSVNFXXXXXXXXXXXXXXXXXX 411
VE +AP++ A+ + VE ++AP+E A +V A S
Sbjct: 684 VEEDKAPIQEAEASVKKAEATVEEIEAPIERAKEVEAQSKEVDAPVKEAEAPAG------ 737
Query: 410 SFVDNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLV 231
+APVE++++ V E E +E+E E E A ++E + +
Sbjct: 738 ----EAEAPVEESEVLVEKAEASVEEAEVPVDEVEASVEEAEAPAHEAEAPVEEAKSSIE 793
Query: 230 IVDLPIEAQPEDLEKAQLVDLPVENVAEPEDL 135
++P+E +E+A++ + E AE D+
Sbjct: 794 EAEVPVEEAEVPVEEAEVPEKGAEAPAEGSDV 825
Score = 34.7 bits (76), Expect = 0.081
Identities = 42/173 (24%), Positives = 67/173 (38%), Gaps = 4/173 (2%)
Frame = -1
Query: 581 ENVEAPVENADFPADSVSFVENLDAPVEDADVLADSVNFXXXXXXXXXXXXXXXXXXSFV 402
E E P++ A+ A + E A E+A+ L + + V
Sbjct: 647 EKAEVPIDEAEAEAQAEVAGEE-KALEEEAETLVEETKVEEDKAPIQEAEASVKKAEATV 705
Query: 401 DNVDAPVEDADLQVAPVNIVDEPVEKTNE---EIENDSEVGSISWVEYPAELDEDGNGLV 231
+ ++AP+E A A VD PV++ E E E + + A ++E V
Sbjct: 706 EEIEAPIERAKEVEAQSKEVDAPVKEAEAPAGEAEAPVEESEVLVEKAEASVEE---AEV 762
Query: 230 IVDLPIEAQPEDLE-KAQLVDLPVENVAEPEDLSPVQVVNPIVENSQSEYPGK 75
VD +EA E+ E A + PVE + + V V V ++E P K
Sbjct: 763 PVD-EVEASVEEAEAPAHEAEAPVEEAKSSIEEAEVPVEEAEVPVEEAEVPEK 814
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 632 EIPVDNVDFPVDSVNF-VENVEAPVENADFPADSVSFVENLDAPVEDADVLAD 477
E PV+ + P + E E PVE ++ + V+ + PVE+A+V A+
Sbjct: 1206 EAPVEETEAPFEEDEAPAEKTEKPVEAGPSVQEAEAPVKETERPVEEAEVQAE 1258
>SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98)
Length = 242
Score = 45.6 bits (103), Expect = 4e-05
Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 4/171 (2%)
Frame = -1
Query: 581 ENVEAPVENADFPADSV-SFVENLDAPVEDADVLADSVNFXXXXXXXXXXXXXXXXXXSF 405
+ VEAP+E A+ P + V + VE ++AP+E+A +
Sbjct: 33 KKVEAPIEEAEAPEEEVEATVEEVEAPMEEAAASVEEAEVPIEKAETQP----------- 81
Query: 404 VDNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIV 225
VD + PVE+A+ DE E+ +E E E VE + E + I
Sbjct: 82 VD-TEGPVENAETSFEEAEAADEETEEPVKEAEGSFEEAEAPVVETEEPVKEAKASVEIT 140
Query: 224 DLPIE--AQPEDLEKA-QLVDLPVENVAEPEDLSPVQVVNPIVENSQSEYP 81
+ PIE PE +E + + + P E V P + V + ++E P
Sbjct: 141 EAPIEEAKAPERVESSVEEAEAPEEEVEAPVEEVEAPVEEAVASVEEAEVP 191
Score = 40.3 bits (90), Expect = 0.002
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Frame = -1
Query: 638 DIEIPVDNVDFPVDSVNF-VENVEAPVENADFPADSVSFVENLDAPVEDADVLADSVN-- 468
+ E PV + PV VE EAP+E A P S VE +AP E+ + + V
Sbjct: 118 EAEAPVVETEEPVKEAKASVEITEAPIEEAKAPERVESSVEEAEAPEEEVEAPVEEVEAP 177
Query: 467 FXXXXXXXXXXXXXXXXXXSFVDNVDAPVEDADLQVAPVNIVDEPVEKTNEEIEND 300
+ ++ + PVEDA+ V PVE+T E D
Sbjct: 178 VEEAVASVEEAEVPIEEAETQAEDTEGPVEDAEESVQEAK---APVEETEAHFEED 230
Score = 38.3 bits (85), Expect = 0.007
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 19/191 (9%)
Frame = -1
Query: 638 DIEIPVDNVDFPVD-SVNFVENVEAPVENADF-PADSVSFVENLDAPVEDADVLADSV-- 471
++E V+ V+ P++ + VE E P+E A+ P D+ VEN + E+A+ +
Sbjct: 48 EVEATVEEVEAPMEEAAASVEEAEVPIEKAETQPVDTEGPVENAETSFEEAEAADEETEE 107
Query: 470 -------NFXXXXXXXXXXXXXXXXXXSFVDNVDAPVEDA------DLQVAPVNIVDEPV 330
+F + V+ +AP+E+A + V +E V
Sbjct: 108 PVKEAEGSFEEAEAPVVETEEPVKEAKASVEITEAPIEEAKAPERVESSVEEAEAPEEEV 167
Query: 329 EKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENVA 150
E EE+E E S E ++E + P+E E +++A+ PVE
Sbjct: 168 EAPVEEVEAPVEEAVASVEEAEVPIEEAETQAEDTEGPVEDAEESVQEAK---APVEETE 224
Query: 149 E--PEDLSPVQ 123
ED +P +
Sbjct: 225 AHFEEDEAPAE 235
>SB_41181| Best HMM Match : DUF164 (HMM E-Value=2.1)
Length = 258
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = -1
Query: 716 IPDEVIQELALAGIELSENVDNVAIFDIEIPVDNVDFPVDSVNFVENV-EAPVENADFPA 540
+P+E + ++ + I + E +++V + I I + D PVDS+N E + + PV + +
Sbjct: 130 VPEEEVNDVPVDSINVQEEMNDVPVGSINIQEEMNDVPVDSINVQEEINDVPVGSINIQE 189
Query: 539 DSVSF-VENLDAPVEDADVLADSVN 468
+ V ++ E DV DS+N
Sbjct: 190 EMNDVPVGGINIQEEVNDVPVDSIN 214
Score = 35.9 bits (79), Expect = 0.035
Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 9/203 (4%)
Frame = -1
Query: 707 EVIQELALAGIELSENVDNVAIFDIEIPVDNVDFPVDSVNFVENVEAPVENADFPADSVS 528
E + ++ I + E + +V I + + D P S+N E + E + +S
Sbjct: 41 EEMSDVPKGSINVQEEMTDVPEGSIHVQEEMTDVPKGSINVQEEITDVPEGCINVQEEMS 100
Query: 527 FVE--NLDAPVEDADVLADSVNFXXXXXXXXXXXXXXXXXXSFVDNVDAPVEDADLQVAP 354
+++ E DV S+N VD+++ E D+ V
Sbjct: 101 NAPKGSINVQEEMTDVPEGSINVQEAITDVPEEEVNDVP----VDSINVQEEMNDVPVGS 156
Query: 353 VNIVDE----PVEKTNEEIE-NDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLE 189
+NI +E PV+ N + E ND VGSI+ E E+++ G + + + P D
Sbjct: 157 INIQEEMNDVPVDSINVQEEINDVPVGSINIQE---EMNDVPVGGINIQEEVNDVPVDSI 213
Query: 188 KAQ--LVDLPVENVAEPEDLSPV 126
Q + D+PV ++ E+++ V
Sbjct: 214 NVQEEMNDVPVGSINIQEEMNDV 236
Score = 32.3 bits (70), Expect = 0.43
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -1
Query: 707 EVIQELALAGIELSENVDNVAIFDIEIPVDNVDFPVDSVNFVENVEAPVENADFPADSVS 528
E I ++ + I + E +++V + I I + D PVDS+N E E D P S++
Sbjct: 175 EEINDVPVGSINIQEEMNDVPVGGINIQEEVNDVPVDSINVQE------EMNDVPVGSIN 228
Query: 527 FVENL-DAP 504
E + D P
Sbjct: 229 IQEEMNDVP 237
>SB_38786| Best HMM Match : HLH (HMM E-Value=1e-13)
Length = 817
Score = 33.9 bits (74), Expect = 0.14
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 10/209 (4%)
Frame = -1
Query: 716 IPDEVIQELALAGIELSE-NVDNVAIFDIEIP---VDNVDFPVDSVNFVENVEAPVENAD 549
IPD ++ + + + + ++ +V + ++IP V VD P +V V+ + V+ D
Sbjct: 565 IPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVD 624
Query: 548 FPADSVSFVENLDA---PVEDADVLADSVNFXXXXXXXXXXXXXXXXXXSFVDNVDAPVE 378
P +V V+ D PV+ DV V+ D PV+
Sbjct: 625 IPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVD 684
Query: 377 DADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLP-IEAQP 201
D+ V PV+I D V+ + V P ++ + + VD+P + +P
Sbjct: 685 IPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPD--VTVKPVDIPDVTVKP 742
Query: 200 EDLEKAQL--VDLPVENVAEPEDLSPVQV 120
D+ + VD+P + +P D+ V V
Sbjct: 743 VDIPDVTVKPVDIP-DVTVKPVDIPDVTV 770
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = -1
Query: 716 IPDEVIQELALAGIELSE-NVDNVAIFDIEIP---VDNVDFPVDSVNFVENVEAPVENAD 549
IPD ++ + + + + ++ +V + ++IP V VD P +V V+ + V+ D
Sbjct: 695 IPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVD 754
Query: 548 FPADSVSFVENLDAPVEDADV 486
P +V V+ D V+ AD+
Sbjct: 755 IPDVTVKPVDIPDVTVKPADI 775
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = -1
Query: 716 IPDEVIQELALAGIELSE-NVDNVAIFDIEIP---VDNVDFPVDSVNFVENVEAPVENAD 549
IPD ++ + + + + ++ +V + ++IP V VD P +V V+ + V+ AD
Sbjct: 715 IPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPAD 774
Query: 548 FPADSVSFVENLDAPVEDADV 486
P +V V+ D V+ D+
Sbjct: 775 IPDVTVKPVDIPDVTVKPVDI 795
Score = 29.1 bits (62), Expect = 4.0
Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 6/177 (3%)
Frame = -1
Query: 632 EIPVDNVDFPVDSVNFVENVEAPVENADFPADSVSFVENLDA---PVEDADVLADSVNFX 462
++ V VD P +V V+ + V+ D P +V V+ D PV+ DV V+
Sbjct: 467 DVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIP 526
Query: 461 XXXXXXXXXXXXXXXXXSFVDNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSI 282
D PV+ D+ V PV+I D V+ + V
Sbjct: 527 DVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIPDVTVKPVDIP 586
Query: 281 SWVEYPAELDEDGNGLVIVDLP-IEAQPEDLEKAQL--VDLPVENVAEPEDLSPVQV 120
P ++ + + VD+P + +P D+ + VD+P + +P D+ V V
Sbjct: 587 DVTVKPVDIPD--VTVKPVDIPDVTVKPVDIPDVTVKPVDIP-DVTVKPVDIPDVTV 640
>SB_36252| Best HMM Match : IQ (HMM E-Value=2.7e-35)
Length = 442
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 629 IPVDNVDFPVDSVNF-VENVEAPVENADFPA-DSVSFVENLDAPVEDADVLAD 477
+ D D P D+ + E+ + P E+AD PA D+ + + +APVE +D AD
Sbjct: 378 VAADAPDAPADTTDTPAEDADTPAEDADTPAEDADTATDAAEAPVEASDPPAD 430
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1
Query: 572 EAPVENADFPA-DSVSFVENLDAPVEDADVLADS 474
+AP + D PA D+ + E+ D P EDAD D+
Sbjct: 384 DAPADTTDTPAEDADTPAEDADTPAEDADTATDA 417
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 638 DIEIPVDNVDFPV-DSVNFVENVEAPVENADFPADSVS 528
D + P ++ D P D+ + EAPVE +D PAD S
Sbjct: 396 DADTPAEDADTPAEDADTATDAAEAPVEASDPPADDES 433
>SB_15354| Best HMM Match : NHL (HMM E-Value=4.4e-14)
Length = 1071
Score = 32.3 bits (70), Expect = 0.43
Identities = 25/86 (29%), Positives = 37/86 (43%)
Frame = +2
Query: 347 CSQGRLVNRRPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRPQLEHRGFLR 526
C R N+R ++H CL + Q G + +EH C + Q G + ++H
Sbjct: 524 CQSSRY-NKRA-MDHTLCLLNSQQSTGCDQDSIEHTPCSLNSQQSTGCGKDTIDHTPC-- 579
Query: 527 SLQSQPGNRHSQLELRHFLRSLQNQQ 604
SL SQ Q + H SL +QQ
Sbjct: 580 SLNSQQSTGCDQGTIDHTPCSLNSQQ 605
>SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11)
Length = 1771
Score = 32.3 bits (70), Expect = 0.43
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Frame = -1
Query: 383 VEDADLQVAPVNIVDEPVEKTNEEIENDSE------VGSISWVEYPAELDEDGNGLVIVD 222
+E DL++ PVN D V + ++IE D++ + I V+Y ++ +G + D
Sbjct: 1024 MEPKDLEL-PVNEPDVEVYEPQQDIEIDADGLRAQILSPIMSVDYDSDASANGGHMRRED 1082
Query: 221 LPIEAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVNP--IVENSQSEYPGKRY 69
E P D+ K P +AE E + V V P E + EY + Y
Sbjct: 1083 PQNEESPPDIAKDDKPLSPEAPIAEAESILLVAEVEPGAKFETCEPEYLKEDY 1135
>SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38)
Length = 641
Score = 31.5 bits (68), Expect = 0.75
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 416 NQPGHRRPQLEHRRCLRSLQNQ--PGHRRPQLEHRGFLRSLQSQPGNRHSQLELRHFLRS 589
NQ H++ Q +H R + QNQ H++ Q +H + Q+Q +RH + + +H R
Sbjct: 568 NQHHHQKQQNQHHRHHQKQQNQHHRHHQKKQNQHYRHHQKQQNQHHHRHRKQQNQHHHRH 627
Query: 590 LQN 598
N
Sbjct: 628 GHN 630
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 386 EHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQ--PGHRRPQLEHRGFLRSLQSQPGNRH 556
+H + Q+ H++ Q +H R + QNQ H++ Q +H R Q+Q +RH
Sbjct: 569 QHHHQKQQNQHHRHHQKQQNQHHRHHQKKQNQHYRHHQKQQNQHHHRHRKQQNQHHHRH 627
>SB_20631| Best HMM Match : KH_2 (HMM E-Value=3.7)
Length = 481
Score = 31.1 bits (67), Expect = 0.99
Identities = 56/206 (27%), Positives = 82/206 (39%), Gaps = 9/206 (4%)
Frame = -1
Query: 662 NVDNVAIFDIEIPVDNVDFPVDSVNFVENVE--APVENADFPADSVSFVENLDAPVEDAD 489
N+D ++F + + VD V V V NV+ A V N D A +FV N+ A V D D
Sbjct: 162 NIDVASVF-VNVDVDAVVVNVGVAAVVANVDVAAVVANVDVAA---AFV-NVAAVVVDVD 216
Query: 488 VLADSVNFXXXXXXXXXXXXXXXXXXSFVDNVDAPVEDADLQVAPVNIVDEPVEKTNEEI 309
A VN V NVDA D+ V+ VD N +
Sbjct: 217 AAAVFVNVNVDVAAVVVNVDAAAV----VVNVDAAAAVVDVAAVVVD-VDAAAVFVNVNV 271
Query: 308 EN---DSEVGSISW-VEYPAELDEDGNGLVIVDLP---IEAQPEDLEKAQLVDLPVENVA 150
+ + EV ++ E + + V+V + IEA D +L + VE VA
Sbjct: 272 DAVIVNVEVAAVVVDCEVAVAVVNAHDAAVVVGIAVGDIEAIRRDATLKRLA-MQVEFVA 330
Query: 149 EPEDLSPVQVVNPIVENSQSEYPGKR 72
E E+ P + I + + YP K+
Sbjct: 331 EIEERYPRFIARIIYHQNLTLYPNKK 356
>SB_54110| Best HMM Match : Hexapep (HMM E-Value=9.8e-14)
Length = 729
Score = 30.7 bits (66), Expect = 1.3
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = -1
Query: 659 VDNVAIFDIEIPVDNVDFPVDSVNFVENVEAPVENADFPADSVSFVENL----DAPVEDA 492
+D+V + D +D+VD VD +++V+ V + D D V V+ + D V D
Sbjct: 54 LDDVDVVDGVTLLDDVDV-VDGATLLDDVD--VVDGDPMLDDVDVVDGVTLLDDVDVVDG 110
Query: 491 DVLADSVNFXXXXXXXXXXXXXXXXXXSFVDNVDAPVEDADLQVAPVNIVD 339
D L D V+ +D+VD VED D + V++VD
Sbjct: 111 DPLLDDVDVVDGVTLLDDVDVVDGAT--LLDDVD--VEDGDAMLDDVDVVD 157
>SB_4140| Best HMM Match : ANF_receptor (HMM E-Value=0.013)
Length = 472
Score = 30.7 bits (66), Expect = 1.3
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Frame = -1
Query: 710 DEVIQELALAGIELSENVDNVAIF--DIEIPVDNVDFPVDSVNFVENVEAPVENADFPAD 537
D+ + +A+ ++ VDNVA+ ++ V NV V+SV+ +NV V+ D D
Sbjct: 360 DDDVVNVAVVVESVAVAVDNVAVVVDSVDDDVVNVAVVVESVD--DNVAVVVDIVDDDVD 417
Query: 536 SVS-FVENLD---APVED-ADVLADSV 471
SVS VE++D A V+D V+ D V
Sbjct: 418 SVSVVVESVDDNVAVVDDNVSVVVDGV 444
>SB_40039| Best HMM Match : F5_F8_type_C (HMM E-Value=6.2e-12)
Length = 1093
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/87 (32%), Positives = 39/87 (44%)
Frame = -1
Query: 395 VDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLP 216
VD P+ D P+ EPV+K +NDS+ SI+ P + G D P
Sbjct: 862 VDKPIAKKDSDDKPITAEGEPVDK--PIAKNDSDDKSITAEGEPDDKPITTKG-ESEDAP 918
Query: 215 IEAQPEDLEKAQLVDLPVENVAEPEDL 135
I A D EKA + ++V E +DL
Sbjct: 919 ITATLNDPEKA-IASGGEKSVIEKDDL 944
>SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06)
Length = 863
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +1
Query: 139 SSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGY 270
SS S++ S+ S+S + S SS +S S+ +S SSS S GY
Sbjct: 589 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSASLGY 632
>SB_49989| Best HMM Match : GRP (HMM E-Value=2.3)
Length = 181
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/108 (19%), Positives = 51/108 (47%)
Frame = +2
Query: 344 RCSQGRLVNRRPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRPQLEHRGFL 523
+ Q V+ + + HR ++ Q+ G + + HR ++ Q+ G + + HRG
Sbjct: 49 QAKQHHRVSGQAKQHHRESGQAKQHHRGSGQAKQHHRGSGQAKQHHRGSGQAKQHHRGSG 108
Query: 524 RSLQSQPGNRHSQLELRHFLRSLQNQQGNRRCQREFQCQKSQRCLHFR 667
++ Q G+ ++ R ++ Q+ +G+ + ++ + + Q H+R
Sbjct: 109 QAKQHHRGSGQAKQHHRGSGQAKQHHRGSGQAKQHHR-ESGQAKQHYR 155
>SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 359 RLVNRRPQLEHRRCLRS*QNQPG-H-RRPQLEHRRCLRSLQNQPGHRRPQLEHR 514
RL RRP+L HRR R +P H RRP+L RR + HRR HR
Sbjct: 163 RLHTRRPRL-HRRRTRLHTRRPRLHTRRPRLHRRRPRLHTRRPRRHRRRPRLHR 215
>SB_36906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 548 NRHSQLELRHFLRSLQNQQGNRRCQREFQCQKSQRCLHFRSIQSRPRRVL 697
NR + +LR L+S +++ R C+ Q + H R+I RP V+
Sbjct: 355 NRTFKEDLRAILQSEAHKELKRWCESTSQASYTMNITHHRAINERPYEVV 404
>SB_9507| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2735
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +3
Query: 57 CSVRVS-FAGVFTLTVLNDGVNYL 125
CS+RV+ + TLTV DGVNY+
Sbjct: 2036 CSIRVNRYRNAATLTVEKDGVNYI 2059
>SB_56345| Best HMM Match : Integrin_alpha (HMM E-Value=0.00047)
Length = 594
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 274 LNILLNWTKMETDLLLLIYLLR-HNPKI*RKPSLLTFPSKMSLNQKT 137
+ + L W K E DL L+YLL KP++L S++ N++T
Sbjct: 395 VTVSLPWKKSEEDLSYLLYLLSVQMSNNTDKPAVLESTSRVGANKRT 441
>SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66)
Length = 264
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/67 (35%), Positives = 29/67 (43%)
Frame = +2
Query: 314 PHSSFQLVHPRCSQGRLVNRRPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHR 493
PH + P+ S L RPQ +HR +P RPQ HR L + Q H
Sbjct: 143 PHRPLEPTRPQESHRPLEPPRPQEQHRPLESHRPLEP--TRPQESHRP-LEPPRPQEPH- 198
Query: 494 RPQLEHR 514
RPQ HR
Sbjct: 199 RPQEPHR 205
>SB_36198| Best HMM Match : Kunitz_BPTI (HMM E-Value=3.6)
Length = 269
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +3
Query: 651 VVY-IFAQFNPGQGE---FLNDFVGDDVHSQRRCFR 746
VVY +FA P GE FLNDF+ HSQRR R
Sbjct: 17 VVYALFASVAPCYGESEVFLNDFLTPYHHSQRRSKR 52
>SB_53055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -1
Query: 641 FDIEIPVDNVD--FPVDSVNFVENVEAPVENADFP 543
+DI + D + P D + F+ENV P E +DFP
Sbjct: 8 YDIGLVFDKIARYSPQDKLKFIENVWKPGELSDFP 42
>SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 28.3 bits (60), Expect = 7.0
Identities = 25/94 (26%), Positives = 44/94 (46%)
Frame = -1
Query: 401 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVD 222
+ V+ E+ + + + + +E EK NEE EN+ E + E ED G
Sbjct: 48 EEVEEEEEEEEEKEDEIEVEEEEEEKENEEEENEDE------EDEEEEEGEDPKG----- 96
Query: 221 LPIEAQPEDLEKAQLVDLPVENVAEPEDLSPVQV 120
P+E+ E + KA + DL + PE++ V++
Sbjct: 97 PPLESYSEQMSKALIGDL---SAKFPENVKVVRI 127
>SB_32544| Best HMM Match : Extensin_2 (HMM E-Value=0.0062)
Length = 282
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = -2
Query: 565 QLRMPISRLTL*AS*KTSMLQLRTPMSWLILXXXXXXSMLQLRTPMSRLILSAS*TTSML 386
Q+R P+ + S L++RTP LQ+R+P + S L
Sbjct: 160 QVRSPLFKSAAFLSSPQPSLRVRTPPFKSAPLFSSPQPSLQVRSPPFKSAAFPSSPQPSL 219
Query: 385 QLRTPIYKS 359
Q+RTP++KS
Sbjct: 220 QVRTPLFKS 228
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +2
Query: 359 RLVNRRPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRR-----PQLEHRGFL 523
+L+ ++ +L+ R L+ Q + ++ L+ + L+ Q + HR+ +L+HR L
Sbjct: 354 KLIQQQEELKQRELLK--QQEVKKQQKLLKQQERLKQ-QEEIRHRQLLKEQEELKHRKLL 410
Query: 524 RSLQSQPGNRHSQLELRHFLRSLQNQQGNRRCQREFQCQKSQRCLH 661
+ Q + + +L+H + + QQ Q E Q + Q H
Sbjct: 411 QEQQKLQHKKLQEEKLKHQKQEEEQQQLQHHKQEEEQLKHQQEQQH 456
>SB_51287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 27.9 bits (59), Expect = 9.2
Identities = 29/70 (41%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 419 QPGHRRPQLEHRRCLRSLQN-QPGHRRPQLEHRGFLRSLQS-QPGNRHSQLELRHFLRSL 592
QPG R E R LR L QPGH RP + LR L + QPG R E + LR L
Sbjct: 75 QPGLRPLDTEQPR-LRPLDTEQPGH-RPLDTEQPRLRPLDTEQPGLRPQDTE-QPGLRPL 131
Query: 593 QNQQGNRRCQ 622
+Q R Q
Sbjct: 132 DTEQPRLRPQ 141
>SB_32223| Best HMM Match : SH3BP5 (HMM E-Value=0.12)
Length = 709
Score = 27.9 bits (59), Expect = 9.2
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +2
Query: 356 GRLVNRRPQLEHRRCL-RS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRPQLEHRGFLRSL 532
GRL +R +LE +S Q H +L H+ R +QP P+ + L
Sbjct: 360 GRLKSRCSELESSYMQSQSLLEQQSHEIFELRHQIAGRQDPHQPSVPSPRTSDGSEVLEL 419
Query: 533 QSQPGNRH-SQLELRHFLRSLQNQQGNRRCQRE 628
++Q N H SQ L L+ Q N + R+
Sbjct: 420 RNQVNNLHISQRSLEQLLQEKQVHVQNLKTLRD 452
>SB_31933| Best HMM Match : PAN (HMM E-Value=3.5e-08)
Length = 231
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Frame = +2
Query: 581 LRSLQNQQGNRRCQREFQCQ------KSQRC-LHFRSIQSRPRRVL 697
LR QG +RC++E QCQ + C L R+IQ +P L
Sbjct: 27 LRDTDIHQGFQRCKKEVQCQSLNYYIRDNTCHLSNRTIQQKPANAL 72
>SB_41994| Best HMM Match : F-box (HMM E-Value=1.4e-06)
Length = 1020
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 506 EHRGFLRSLQSQPGNRHSQLELRHFLRSLQNQQG 607
EH LR L + +R S E+ HFLRS +N +G
Sbjct: 679 EHLRSLRMLDMR-NSRGSMDEIEHFLRSAENLEG 711
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,401,963
Number of Sequences: 59808
Number of extensions: 423221
Number of successful extensions: 1665
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1556
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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