Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k13r
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    31   0.010
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    31   0.010
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    26   0.38 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    26   0.38 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.2  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 378 MRNWLYNLWFICCTNIGNSLVWWC 449
           M N L +LWFI CT  G   VW C
Sbjct: 217 MLNCLCSLWFINCTAKGRVAVWMC 240


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 378 MRNWLYNLWFICCTNIGNSLVWWC 449
           M N L +LWFI CT  G   VW C
Sbjct: 217 MLNCLCSLWFINCTAKGRVAVWMC 240


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = -2

Query: 311 VQVLVSYMLMLVFMTYNTWLCAAV 240
           VQ++++  + L+F++YN ++C  V
Sbjct: 180 VQLILTQAIFLMFVSYNIYVCQTV 203


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = -2

Query: 311 VQVLVSYMLMLVFMTYNTWLCAAV 240
           VQ++++  + L+F++YN ++C  V
Sbjct: 106 VQLILTQAIFLMFVSYNIYVCQTV 129


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +2

Query: 299 LALEPHEVSFAMRVLCSS--S*EHFFQAYEELAVQFVVHLLHKYWQLPCLVVLRHNTVVL 472
           + L+   ++  M   C S  + +   + + E+     + L   YWQ+P     R  T  L
Sbjct: 357 ICLDARMINSKMIADCESPPAADELLRRFHEIRYMSTIDLRSSYWQIPLSPESRQYTAFL 416

Query: 473 H 475
           +
Sbjct: 417 Y 417


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 203 WRESVVVDFTEHC 165
           WRE  VV+   HC
Sbjct: 480 WREKCVVEGNPHC 492


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 542 IFIIALLYEGLKYYRKHLLWKTYAGLQYCA 453
           IFII ++ +  +    HLL+    G+ Y A
Sbjct: 615 IFIICVIVQSEQIAWLHLLYIFLVGIMYAA 644


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 314 GVQVLVSYMLMLVFMTYNTWLCAAVVLGSAT 222
           G+Q+L    + +++ TY  +L      GSAT
Sbjct: 231 GLQILGILFVGVIYTTYTIFLLLIFGSGSAT 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,673
Number of Sequences: 336
Number of extensions: 4747
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)