Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k13r
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80441-7|AAB37655.1| 252|Caenorhabditis elegans Hypothetical pr... 87 2e-17
U55856-1|AAA98020.1| 162|Caenorhabditis elegans Hypothetical pr... 86 2e-17
U80441-6|AAT68894.1| 256|Caenorhabditis elegans Hypothetical pr... 82 4e-16
Z68217-2|CAA92470.2| 134|Caenorhabditis elegans Hypothetical pr... 60 5e-16
AF043701-5|ABP57822.1| 166|Caenorhabditis elegans Hypothetical ... 66 3e-11
Z68217-5|CAC70098.1| 166|Caenorhabditis elegans Hypothetical pr... 62 6e-10
AF043701-4|ABP57821.1| 132|Caenorhabditis elegans Hypothetical ... 61 7e-10
Z68217-8|CAI59117.1| 156|Caenorhabditis elegans Hypothetical pr... 52 6e-07
AF043701-3|ABP57819.1| 147|Caenorhabditis elegans Hypothetical ... 51 1e-06
AC006807-1|AAK84615.1| 130|Caenorhabditis elegans Hypothetical ... 49 4e-06
Z68217-9|CAN86607.1| 142|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical pr... 33 0.22
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 28 6.3
>U80441-7|AAB37655.1| 252|Caenorhabditis elegans Hypothetical
protein F27C1.2a protein.
Length = 252
Score = 86.6 bits (205), Expect = 2e-17
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 11/167 (6%)
Frame = -2
Query: 674 SGHGDHSSHNMGMSMTFHGGYIETILFSWWNVTEXGEFVGSFFAIFIIALLYEGLKYYRK 495
+GHG H H M M FHGG+ E ILF +W + S AIFI+ YEG+K++R
Sbjct: 66 AGHGGHEGHMM--KMWFHGGFEEVILFDFWRTDSLFGMLLSCAAIFIMGATYEGVKWFRV 123
Query: 494 HL-LWKTYAGL---QYCAVAPPDKGVANICAADEPQIVQPI--PHMLERNVPTMMSTA-- 339
L + +T A + + C G + Q +P P ++ +V +T+
Sbjct: 124 FLQMTQTQAQVLANKSCVETTRSSGGTCHQSVTHSQSNKPQSEPFLISASVARTPATSPF 183
Query: 338 ---HAWQTILHGVQVLVSYMLMLVFMTYNTWLCAAVVLGSATGYFLF 207
Q +L+ Q++++Y LML+ MTYNT+L AAVVLG+ G++LF
Sbjct: 184 SPQRLIQMLLYIFQLVLAYWLMLIVMTYNTYLTAAVVLGAGFGHWLF 230
>U55856-1|AAA98020.1| 162|Caenorhabditis elegans Hypothetical
protein F31E8.4 protein.
Length = 162
Score = 86.2 bits (204), Expect = 2e-17
Identities = 56/165 (33%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Frame = -2
Query: 644 MGMSMTFHGGYIETILFSWWNVTEXGEFVGSFFAIFIIALLYEGLKYYRKHL-LWKTYAG 468
M M MT H G E ILFSWW S F++ +LYE +K +R L +W
Sbjct: 1 MDMDMTLHFGEREKILFSWWKTGSLSGMAVSMLITFLLCILYEAIKSFRYFLAVWNNQKR 60
Query: 467 LQYCAVA----PPDKGVANICAADEPQIVQPIPHMLERNVPTMMSTAHAWQTILHGVQVL 300
Q A A P + G NI +++ + P+ L + ++ Q L+G+Q L
Sbjct: 61 QQRHAEASITNPQNSGGDNI--SEDSIHIAPLVQ-LSGFTKRLFTSYRLAQGALYGLQAL 117
Query: 299 VSYMLMLVFMTYNTWLCAAVVLGSATGYFLFGWRESVVVDFTEHC 165
++Y LML+ MTYN L ++V+G A GYFLF V T+ C
Sbjct: 118 LAYTLMLIAMTYNMNLILSIVVGEAVGYFLFTGNPLVEQHLTDCC 162
>U80441-6|AAT68894.1| 256|Caenorhabditis elegans Hypothetical
protein F27C1.2b protein.
Length = 256
Score = 82.2 bits (194), Expect = 4e-16
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 15/171 (8%)
Frame = -2
Query: 674 SGHGDHSSHNMGMSMTFHGGYIETILFSWWNVTEXGEFVGSFFAIFIIALLYEGLKYYRK 495
+GHG H H M M FHGG+ E ILF +W + S AIFI+ YEG+K++R
Sbjct: 66 AGHGGHEGHMM--KMWFHGGFEEVILFDFWRTDSLFGMLLSCAAIFIMGATYEGVKWFRV 123
Query: 494 HL-LWKTYAGL---QYCA--VAPPDKGVANIC----AADEPQIVQPIPHMLERNVPTMMS 345
L + +T A + + C + C + Q P ++ +V +
Sbjct: 124 FLQMTQTQAQVLANKSCVEFALQTTRSSGGTCHQSVTHSQSNKPQSEPFLISASVARTPA 183
Query: 344 TA-----HAWQTILHGVQVLVSYMLMLVFMTYNTWLCAAVVLGSATGYFLF 207
T+ Q +L+ Q++++Y LML+ MTYNT+L AAVVLG+ G++LF
Sbjct: 184 TSPFSPQRLIQMLLYIFQLVLAYWLMLIVMTYNTYLTAAVVLGAGFGHWLF 234
>Z68217-2|CAA92470.2| 134|Caenorhabditis elegans Hypothetical
protein F58G6.3 protein.
Length = 134
Score = 60.5 bits (140), Expect(2) = 5e-16
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = -2
Query: 383 PHMLERNVPTMMSTAHAWQTILHGVQVLVSYMLMLVFMTYNTWLCAAVVLGSATGYFLFG 204
P E + ++ST H +QT L VQ+ SY LML+FMT++ WL AVV+G + G+ +FG
Sbjct: 71 PSKKESYISRLLSTMHFFQTFLFFVQLGFSYCLMLIFMTFSIWLGLAVVIGLSIGFLIFG 130
Query: 203 WR 198
R
Sbjct: 131 GR 132
Score = 41.5 bits (93), Expect(2) = 5e-16
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 638 MSMTFHGGYIETILFSWWNVTEXGEFVGSFFAIFIIALLYEGLKYYRK 495
M M FH +T+LFS WN+T G+ V + + I ++ E +KY R+
Sbjct: 16 MWMWFHTKPQDTVLFSTWNITSAGKMVWACILVAIAGIILEAIKYNRR 63
>AF043701-5|ABP57822.1| 166|Caenorhabditis elegans Hypothetical
protein K12C11.7 protein.
Length = 166
Score = 66.1 bits (154), Expect = 3e-11
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 1/146 (0%)
Frame = -2
Query: 638 MSMTFHGGYIETILFSWWNVTEXGEFVGSFFAIFIIALLYEGLKYYRKHLLWKTYAGLQY 459
M M FH E ILF W T+ +V S ++F IA E LK+ R+ + L
Sbjct: 6 MQMYFHFRIQEPILFRQWKPTDTTGYVFSCISLFFIAFCLELLKFGRQRMTRTVKEKLAV 65
Query: 458 -CAVAPPDKGVANICAADEPQIVQPIPHMLERNVPTMMSTAHAWQTILHGVQVLVSYMLM 282
C + P+ G+ I EP + + + ++ S H + L +Q V Y LM
Sbjct: 66 DCCCSTPE-GIWEIPEEPEPSPRGKLASLAPFTMESISSWRHFASSFLFFLQNFVDYSLM 124
Query: 281 LVFMTYNTWLCAAVVLGSATGYFLFG 204
LV MTYN L +++ G A GYF G
Sbjct: 125 LVAMTYNYPLFFSLLAGHAIGYFFVG 150
>Z68217-5|CAC70098.1| 166|Caenorhabditis elegans Hypothetical
protein F58G6.7 protein.
Length = 166
Score = 61.7 bits (143), Expect = 6e-10
Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
Frame = -2
Query: 647 NMGMSMTFHGGYIETILFSWWNVTEXGEFVGSFFAIFIIALLYEGLKYYRKHLLWKTYAG 468
+M M M FH E ILF W +V S IF+IA E LK+ R L K
Sbjct: 3 HMMMEMYFHFRIEEPILFREWKPLNTTAYVFSCIEIFLIAFCLEALKFGRTKLSPKVKIV 62
Query: 467 LQY--CAVAPPDKGVANICAADEPQIVQPIPHMLERNVPTMMSTAHAWQTILHGVQVLVS 294
+ C + G+ NI + + Q + +++S H ++L VQ +
Sbjct: 63 EKKVDCCCSTEKDGLWNI--PETIPLTQKTVTLAPFTRDSLISKFHMASSLLVFVQHFID 120
Query: 293 YMLMLVFMTYNTWLCAAVVLGSATGYFLFG 204
Y LMLV MTYN + +++ G TGYF G
Sbjct: 121 YSLMLVSMTYNWPIFLSLLAGHTTGYFFLG 150
>AF043701-4|ABP57821.1| 132|Caenorhabditis elegans Hypothetical
protein K12C11.6 protein.
Length = 132
Score = 61.3 bits (142), Expect = 7e-10
Identities = 51/148 (34%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Frame = -2
Query: 638 MSMTFHGGYIETILFSWWNVTEXGEFVGSFFAIFIIALLYEGLKYYRKHLLWKTYAGLQY 459
M M FH +T+LF WNVT+ V I + +L E +K+ R WK
Sbjct: 9 MHMWFHTKTQDTVLFKTWNVTDTPTMVWVCCIIVVAGILLELIKFLR----WKI------ 58
Query: 458 CAVAPPDKGVANICAADEPQIVQPIPHMLERN-VPTMMSTAHAWQTILHGVQVLVSYMLM 282
+K N DE ++ R+ + + S H QTIL VQ+ SY+LM
Sbjct: 59 ------EKWHKN---RDE---------LVSRSYISRLFSPIHIGQTILFMVQLSFSYILM 100
Query: 281 LVFMTYNTWLCAAVVLGSATGYFLFGWR 198
L+FMT++ WL AVV+G GY FG R
Sbjct: 101 LLFMTFSVWLGIAVVVGLGIGYLAFGAR 128
>Z68217-8|CAI59117.1| 156|Caenorhabditis elegans Hypothetical
protein F58G6.9a protein.
Length = 156
Score = 51.6 bits (118), Expect = 6e-07
Identities = 40/147 (27%), Positives = 71/147 (48%)
Frame = -2
Query: 638 MSMTFHGGYIETILFSWWNVTEXGEFVGSFFAIFIIALLYEGLKYYRKHLLWKTYAGLQY 459
M M +H +T+LF W V + G V + F + +L E LKY R W T ++
Sbjct: 21 MWMWYHVDVEDTVLFKSWTVFDAGTMVWTCFVVAAAGILLEALKYAR----WATEERMKI 76
Query: 458 CAVAPPDKGVANICAADEPQIVQPIPHMLERNVPTMMSTAHAWQTILHGVQVLVSYMLML 279
D+ N+ + + ++ IP E+ H ++ H Q+L++Y+LM
Sbjct: 77 ------DQ--ENVDSKTKYGGIK-IPGKSEKY---NFWKRHIIDSLYHFWQLLLAYILMN 124
Query: 278 VFMTYNTWLCAAVVLGSATGYFLFGWR 198
V+M ++ ++C ++ G A G+F+F R
Sbjct: 125 VYMVFSVYICLSLCFGLAIGHFVFASR 151
>AF043701-3|ABP57819.1| 147|Caenorhabditis elegans Hypothetical
protein K12C11.3 protein.
Length = 147
Score = 50.8 bits (116), Expect = 1e-06
Identities = 39/143 (27%), Positives = 60/143 (41%)
Frame = -2
Query: 626 FHGGYIETILFSWWNVTEXGEFVGSFFAIFIIALLYEGLKYYRKHLLWKTYAGLQYCAVA 447
+H + ILF W V + + S F + L E LKY + W A +Q
Sbjct: 21 YHVELNDVILFENWKVQDMTTMIWSCFVVGFAGFLLEFLKYSK----WA--ASMQMRPAG 74
Query: 446 PPDKGVANICAADEPQIVQPIPHMLERNVPTMMSTAHAWQTILHGVQVLVSYMLMLVFMT 267
D+ V P N + H Q + H Q L++++LM ++MT
Sbjct: 75 DVDR------RTKYGGCVVP-----SENRKKLFWARHVVQAMYHFWQTLLAFILMNIYMT 123
Query: 266 YNTWLCAAVVLGSATGYFLFGWR 198
+N ++C ++ LG GYF FG R
Sbjct: 124 FNVYICLSLCLGLTIGYFFFGSR 146
>AC006807-1|AAK84615.1| 130|Caenorhabditis elegans Hypothetical
protein Y58A7A.1 protein.
Length = 130
Score = 48.8 bits (111), Expect = 4e-06
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Frame = -2
Query: 632 MTFHGGYIETILFSWWNV-TEXGEFVGSFFAIFIIALLYEGLKYYRKHLLWKTYAGLQYC 456
M+FH G ETILF +W T G V F + ++A L E L+++R + K L
Sbjct: 1 MSFHFGTEETILFDFWKTETAVGIAVACFITV-LLAFLMETLRFFRDYR--KAQTQLHQP 57
Query: 455 AVAPPDKGVANICAADEPQIVQPIPHMLERNVPTMMSTAHAWQTILHGVQVLVSYMLMLV 276
++P D+ + + + ++ P+ + Q+ ++Y LML+
Sbjct: 58 PISPEDR----LKRSPQLDLIDPLLQLF---------------------QLTIAYFLMLI 92
Query: 275 FMTYNTWLCAAVVLGSATGYFLF 207
FMT+N +LC V+G + L+
Sbjct: 93 FMTFNAYLCFFTVVGEVVCHLLY 115
>Z68217-9|CAN86607.1| 142|Caenorhabditis elegans Hypothetical
protein F58G6.9b protein.
Length = 142
Score = 46.0 bits (104), Expect = 3e-05
Identities = 38/147 (25%), Positives = 67/147 (45%)
Frame = -2
Query: 638 MSMTFHGGYIETILFSWWNVTEXGEFVGSFFAIFIIALLYEGLKYYRKHLLWKTYAGLQY 459
M M +H +T+LF W V + G V + F + +L E LKY R W T ++
Sbjct: 21 MWMWYHVDVEDTVLFKSWTVFDAGTMVWTCFVVAAAGILLEALKYAR----WATEERMKI 76
Query: 458 CAVAPPDKGVANICAADEPQIVQPIPHMLERNVPTMMSTAHAWQTILHGVQVLVSYMLML 279
+ + V + +R++ + S H W Q+L++Y+LM
Sbjct: 77 -----------------DQENVDSKTNFWKRHI--IDSLYHFW-------QLLLAYILMN 110
Query: 278 VFMTYNTWLCAAVVLGSATGYFLFGWR 198
V+M ++ ++C ++ G A G+F+F R
Sbjct: 111 VYMVFSVYICLSLCFGLAIGHFVFASR 137
>U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical
protein F01G12.1 protein.
Length = 178
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Frame = -2
Query: 662 DHSSHNMG------MSMTFHGGYIETILFSWWNVTEXGE---FVGSFFAIFIIALLY 519
+H HNM M M FH G+ E +LF +W + + +G+ F +I A+L+
Sbjct: 104 EHKHHNMRSHDHHTMKMWFHWGFDEVVLFDFWRIDDKNALAVILGAGFGHWIFAVLH 160
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -1
Query: 492 FTMEDICRTTVLCRSTTRQGSCQYLCSR*TTNCTANSSYA*KKCSYDDEHSTRMANDTSW 313
F + D+ + + + G C++LC T + NS K+C HSTR+ N S
Sbjct: 2256 FDVMDVKSSVLFTACSNNNGGCEHLC---ITTPSENSPTVRKECLC--VHSTRLDNG-SC 2309
Query: 312 GSSAS 298
GSS S
Sbjct: 2310 GSSDS 2314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,737,761
Number of Sequences: 27780
Number of extensions: 414081
Number of successful extensions: 953
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -