Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k13r
(765 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264333-1|BAF44088.1| 36|Apis mellifera ecdysone-induced prot... 25 0.77
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 4.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 4.1
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 4.1
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 4.1
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 4.1
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 4.1
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 4.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 4.1
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 4.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 5.4
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 5.4
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 5.4
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 5.4
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 5.4
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 5.4
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 22 7.2
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 7.2
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 22 7.2
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 21 9.5
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.5
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.5
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 9.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.5
>AB264333-1|BAF44088.1| 36|Apis mellifera ecdysone-induced protein
75 protein.
Length = 36
Score = 25.0 bits (52), Expect = 0.77
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 404 PQIVQPIPHMLERNVPTMMST 342
P V +PH L N+PTM ST
Sbjct: 4 PYHVAQLPHHLSPNMPTMDST 24
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 25 NWYKSFNSTSYNLSSYNMDFY 87
N+ ++N+ +YN ++YN Y
Sbjct: 93 NYKYNYNNNNYNNNNYNKKLY 113
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 25 NWYKSFNSTSYNLSSYNMDFY 87
N+ ++N+ +YN ++YN Y
Sbjct: 93 NYKYNYNNNNYNNNNYNKKLY 113
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 90 LSSIRNKVFTTNTNHHYN 143
+SS+ NK N N+ YN
Sbjct: 82 ISSLSNKTIHNNNNYKYN 99
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 90 LSSIRNKVFTTNTNHHYN 143
+SS+ NK N N+ YN
Sbjct: 82 ISSLSNKTIHNNNNYKYN 99
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 90 LSSIRNKVFTTNTNHHYN 143
+SS+ NK N N+ YN
Sbjct: 82 ISSLSNKTIHNNNNYKYN 99
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 90 LSSIRNKVFTTNTNHHYN 143
+SS+ NK N N+ YN
Sbjct: 82 ISSLSNKTIHNNNNYKYN 99
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 90 LSSIRNKVFTTNTNHHYN 143
+SS+ NK N N+ YN
Sbjct: 82 ISSLSNKTIHNNNNYKYN 99
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 90 LSSIRNKVFTTNTNHHYN 143
+SS+ NK N N+ YN
Sbjct: 315 ISSLSNKTIHNNNNYKYN 332
Score = 21.4 bits (43), Expect = 9.5
Identities = 6/20 (30%), Positives = 15/20 (75%)
Frame = +1
Query: 25 NWYKSFNSTSYNLSSYNMDF 84
N+ ++N+ +YN ++YN ++
Sbjct: 328 NYKYNYNNNNYNNNNYNNNY 347
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 4.1
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 102 RNKVFTTNTNHHYNCEH-FSSVTMFSEVNNYRFAPTKEEV 218
RN F HH+ C + +SVT +++ N +F T++ +
Sbjct: 422 RNPWFVEFWEHHFQCRYPNASVTPYNK-NYTKFCSTEKRL 460
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 184 TTTDSRQPKRKYPVADPNTTAAHSHV 261
++T S PK +Y + N +H H+
Sbjct: 104 SSTSSNDPKNQYKNQNNNHYTSHQHL 129
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 19 LYNWYKSFNSTSYNLSSYNMDFY 87
L N YK N +YN ++YN + Y
Sbjct: 85 LSNNYKYSNYNNYNNNNYNNNNY 107
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 19 LYNWYKSFNSTSYNLSSYNMDFY 87
L N YK N +YN ++YN + Y
Sbjct: 85 LSNNYKYSNYNNYNNNNYNNNNY 107
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 19 LYNWYKSFNSTSYNLSSYNMDFY 87
L N YK N +YN ++YN + Y
Sbjct: 85 LSNNYKYSNYNNYNNNNYNNNNY 107
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 19 LYNWYKSFNSTSYNLSSYNMDFY 87
L N YK N +YN ++YN + Y
Sbjct: 85 LSNNYKYSNYNNYNNNNYNNNNY 107
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 22.2 bits (45), Expect = 5.4
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 629 SWTCPYCGYC 658
++TCP CG C
Sbjct: 72 AYTCPICGAC 81
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 498 SIIFKAFIEQSYNKYCKK 551
S+ FK+ I +++ CKK
Sbjct: 60 SVFFKSHITEAFQTQCKK 77
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.8 bits (44), Expect = 7.2
Identities = 6/23 (26%), Positives = 14/23 (60%)
Frame = -2
Query: 488 LWKTYAGLQYCAVAPPDKGVANI 420
+W Y G+ Y + PP++ + ++
Sbjct: 192 VWWDYKGIVYFELLPPNRTINSV 214
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 498 SIIFKAFIEQSYNKYCKK 551
S+ FK+ I +++ CKK
Sbjct: 60 SVFFKSHITEAFQTQCKK 77
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 21.4 bits (43), Expect = 9.5
Identities = 6/24 (25%), Positives = 15/24 (62%)
Frame = -2
Query: 491 LLWKTYAGLQYCAVAPPDKGVANI 420
L+W + G+ Y + PP++ + ++
Sbjct: 70 LVWWDHKGIVYFELLPPNRTINSV 93
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 25 NWYKSFNSTSYNLSSYNMDF 84
N Y ++N +YN YN+++
Sbjct: 96 NNYNNYNKHNYNKLYYNINY 115
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 90 LSSIRNKVFTTNTNHHYN 143
+SS+ N+ N N+ YN
Sbjct: 82 ISSLSNRTIHNNNNYKYN 99
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 25 NWYKSFNSTSYNLSSYNMDF 84
N Y ++N +YN YN+++
Sbjct: 96 NNYNNYNKHNYNKLYYNINY 115
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 25 NWYKSFNSTSYNLSSYNMDF 84
N Y ++N +YN YN+++
Sbjct: 96 NNYNNYNKHNYNKLYYNINY 115
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 25 NWYKSFNSTSYNLSSYNMDF 84
N Y ++N +YN YN+++
Sbjct: 96 NNYNNYNKHNYNKLYYNINY 115
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 25 NWYKSFNSTSYNLSSYNMDF 84
N Y ++N +YN YN+++
Sbjct: 96 NNYNNYNKHNYNKLYYNINY 115
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 25 NWYKSFNSTSYNLSSYNMDF 84
N Y ++N +YN YN+++
Sbjct: 96 NNYNNYNKHNYNKLYYNINY 115
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 25 NWYKSFNSTSYNLSSYNMDF 84
N Y ++N +YN YN+++
Sbjct: 96 NNYNNYNKHNYNKLYYNINY 115
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 25 NWYKSFNSTSYNLSSYNMDF 84
N Y ++N +YN YN+++
Sbjct: 96 NNYNNYNKHNYNKLYYNINY 115
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 25 NWYKSFNSTSYNLSSYNMDF 84
N Y ++N +YN YN+++
Sbjct: 96 NNYNNYNKHNYNKLYYNINY 115
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -2
Query: 41 NDLYQLYNKKMYH 3
N+ Y+ YNKK+Y+
Sbjct: 326 NNNYKNYNKKLYY 338
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 25 NWYKSFNSTSYNLSSYNMDF 84
N Y ++N +YN YN+++
Sbjct: 329 NNYNNYNKHNYNKLYYNINY 348
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 25 NWYKSFNSTSYNLSSYNMDF 84
N Y ++N +YN YN+++
Sbjct: 329 NNYNNYNKHNYNKLYYNINY 348
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,258
Number of Sequences: 438
Number of extensions: 5282
Number of successful extensions: 40
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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