Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k12r
         (575 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68108-15|CAJ58502.1|  582|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z68108-5|CAD44152.2|  725|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AY390537-1|AAQ94949.1|  692|Caenorhabditis elegans SMA-9 class B...    29   3.1  
AY389809-1|AAR28681.1|  909|Caenorhabditis elegans zinc finger t...    29   3.1  
U28929-4|AAA68347.3|  338|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z75952-5|CAB00093.2|  149|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z72507-1|CAA96633.2|  172|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z68108-15|CAJ58502.1|  582|Caenorhabditis elegans Hypothetical
           protein T05A10.1k protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 448 RISQERRPARQRVQLVDARPQPALXARVVAQLHRQQHARRTQ 573
           +ISQ ++ A+Q   +   + QP+  ++V AQL +QQ  ++ Q
Sbjct: 263 QISQAQQQAQQAQHVQSRQMQPSQQSQVQAQLQQQQQLQQQQ 304


>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
           protein T05A10.1a protein.
          Length = 2066

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 448 RISQERRPARQRVQLVDARPQPALXARVVAQLHRQQHARRTQ 573
           +ISQ ++ A+Q   +   + QP+  ++V AQL +QQ  ++ Q
Sbjct: 240 QISQAQQQAQQAQHVQSRQMQPSQQSQVQAQLQQQQQLQQQQ 281


>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
           protein T05A10.1f protein.
          Length = 2048

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 448 RISQERRPARQRVQLVDARPQPALXARVVAQLHRQQHARRTQ 573
           +ISQ ++ A+Q   +   + QP+  ++V AQL +QQ  ++ Q
Sbjct: 240 QISQAQQQAQQAQHVQSRQMQPSQQSQVQAQLQQQQQLQQQQ 281


>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
           protein T05A10.1e protein.
          Length = 2101

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 448 RISQERRPARQRVQLVDARPQPALXARVVAQLHRQQHARRTQ 573
           +ISQ ++ A+Q   +   + QP+  ++V AQL +QQ  ++ Q
Sbjct: 240 QISQAQQQAQQAQHVQSRQMQPSQQSQVQAQLQQQQQLQQQQ 281


>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
           protein T05A10.1d protein.
          Length = 2134

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 448 RISQERRPARQRVQLVDARPQPALXARVVAQLHRQQHARRTQ 573
           +ISQ ++ A+Q   +   + QP+  ++V AQL +QQ  ++ Q
Sbjct: 240 QISQAQQQAQQAQHVQSRQMQPSQQSQVQAQLQQQQQLQQQQ 281


>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
           protein T05A10.1g protein.
          Length = 1888

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 448 RISQERRPARQRVQLVDARPQPALXARVVAQLHRQQHARRTQ 573
           +ISQ ++ A+Q   +   + QP+  ++V AQL +QQ  ++ Q
Sbjct: 240 QISQAQQQAQQAQHVQSRQMQPSQQSQVQAQLQQQQQLQQQQ 281


>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
           protein T05A10.1i protein.
          Length = 1927

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 448 RISQERRPARQRVQLVDARPQPALXARVVAQLHRQQHARRTQ 573
           +ISQ ++ A+Q   +   + QP+  ++V AQL +QQ  ++ Q
Sbjct: 240 QISQAQQQAQQAQHVQSRQMQPSQQSQVQAQLQQQQQLQQQQ 281


>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
           protein T05A10.1j protein.
          Length = 1509

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 448 RISQERRPARQRVQLVDARPQPALXARVVAQLHRQQHARRTQ 573
           +ISQ ++ A+Q   +   + QP+  ++V AQL +QQ  ++ Q
Sbjct: 240 QISQAQQQAQQAQHVQSRQMQPSQQSQVQAQLQQQQQLQQQQ 281


>Z68108-5|CAD44152.2|  725|Caenorhabditis elegans Hypothetical
           protein T05A10.1b protein.
          Length = 725

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 448 RISQERRPARQRVQLVDARPQPALXARVVAQLHRQQHARRTQ 573
           +ISQ ++ A+Q   +   + QP+  ++V AQL +QQ  ++ Q
Sbjct: 263 QISQAQQQAQQAQHVQSRQMQPSQQSQVQAQLQQQQQLQQQQ 304


>AY390537-1|AAQ94949.1|  692|Caenorhabditis elegans SMA-9 class B
           protein.
          Length = 692

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 448 RISQERRPARQRVQLVDARPQPALXARVVAQLHRQQHARRTQ 573
           +ISQ ++ A+Q   +   + QP+  ++V AQL +QQ  ++ Q
Sbjct: 263 QISQAQQQAQQAQHVQSRQMQPSQQSQVQAQLQQQQQLQQQQ 304


>AY389809-1|AAR28681.1|  909|Caenorhabditis elegans zinc finger
           transcription factorSMA-9 protein.
          Length = 909

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 448 RISQERRPARQRVQLVDARPQPALXARVVAQLHRQQHARRTQ 573
           +ISQ ++ A+Q   +   + QP+  ++V AQL +QQ  ++ Q
Sbjct: 240 QISQAQQQAQQAQHVQSRQMQPSQQSQVQAQLQQQQQLQQQQ 281


>U28929-4|AAA68347.3|  338|Caenorhabditis elegans Hypothetical
           protein F09C12.6 protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 26  FVYITYETSYLIYFLLNCIWQITA 97
           F+YI   + YL  FL+NCI  I A
Sbjct: 196 FIYICNISGYLFSFLINCITMIKA 219


>Z75952-5|CAB00093.2|  149|Caenorhabditis elegans Hypothetical
           protein F29D10.2 protein.
          Length = 149

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -1

Query: 566 RRACCWRWSCATTRAXSAGCGRASTSCTRCRAG 468
           R  CC R  C  T   +  C R  T C  C  G
Sbjct: 72  RCCCCCRPKCCCTCCRTCCCTRCCTCCRPCCCG 104


>Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical
           protein C06A1.7 protein.
          Length = 149

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -1

Query: 566 RRACCWRWSCATTRAXSAGCGRASTSCTRCRAG 468
           R  CC R  C  T   +  C R  T C  C  G
Sbjct: 74  RCCCCCRPKCCCTCCRTCCCTRCCTCCRPCCCG 106


>Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical
           protein C06A1.6 protein.
          Length = 152

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -1

Query: 566 RRACCWRWSCATTRAXSAGCGRASTSCTRCRAG 468
           R  CC R  C  T   +  C R  T C  C  G
Sbjct: 77  RCCCCCRPKCCCTCCRTCCCTRCCTCCRPCCCG 109


>Z72507-1|CAA96633.2|  172|Caenorhabditis elegans Hypothetical
           protein F17C11.1 protein.
          Length = 172

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 557 CCWRWSCATTRAXSAGCGRASTSCTRCRAGRRSCDI 450
           C ++W+ ATT A +A C     SCT C  G   C++
Sbjct: 87  CVFKWAFATTAAATA-C-----SCTCCLLGTDQCEM 116


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,077,830
Number of Sequences: 27780
Number of extensions: 217095
Number of successful extensions: 627
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)