BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV10k12f (613 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 39 0.002 Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 39 0.002 AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 37 0.013 AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 37 0.013 Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 32 0.37 Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 32 0.37 AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical ... 31 0.49 Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical pr... 30 1.5 AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical... 29 2.6 Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 4.6 Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 28 4.6 U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical pr... 28 4.6 U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical pr... 28 4.6 AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 28 4.6 AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 28 4.6 >Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical protein T23G11.6a protein. Length = 653 Score = 39.1 bits (87), Expect = 0.002 Identities = 15/35 (42%), Positives = 27/35 (77%) Frame = +2 Query: 461 LDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVI 565 L+T++++N+ ++ L +D FK +LSY+D+SGN I Sbjct: 160 LETVVFSNNKLDSLGVDQFKNKKQLSYLDVSGNFI 194 >Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical protein T23G11.6b protein. Length = 616 Score = 39.1 bits (87), Expect = 0.002 Identities = 15/35 (42%), Positives = 27/35 (77%) Frame = +2 Query: 461 LDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVI 565 L+T++++N+ ++ L +D FK +LSY+D+SGN I Sbjct: 160 LETVVFSNNKLDSLGVDQFKNKKQLSYLDVSGNFI 194 >AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. Length = 542 Score = 36.7 bits (81), Expect = 0.013 Identities = 21/57 (36%), Positives = 33/57 (57%) Frame = +2 Query: 389 LTCSNTSVQDNKLTKTTLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGN 559 L SN + ++L+ L+ Y NL + +I N++I +L D+F T P L +DLS N Sbjct: 51 LDLSNNRI--SRLSADELSLYPNL-EQLILHNNSITHLSADVFSTLPSLRVLDLSSN 104 >AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical protein Y71F9B.8 protein. Length = 542 Score = 36.7 bits (81), Expect = 0.013 Identities = 21/57 (36%), Positives = 33/57 (57%) Frame = +2 Query: 389 LTCSNTSVQDNKLTKTTLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGN 559 L SN + ++L+ L+ Y NL + +I N++I +L D+F T P L +DLS N Sbjct: 51 LDLSNNRI--SRLSADELSLYPNL-EQLILHNNSITHLSADVFSTLPSLRVLDLSSN 104 >Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical protein K09C8.5 protein. Length = 1328 Score = 31.9 bits (69), Expect = 0.37 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = +2 Query: 419 NKLTKTTLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVIK 568 N L+K+ NL + +N++I +E L +FP L Y+DLS N I+ Sbjct: 57 NSLSKSNFQALPNL-QYLDLSNNSIRDIEETLLDSFPGLKYLDLSWNKIR 105 >Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical protein K09C8.5 protein. Length = 1328 Score = 31.9 bits (69), Expect = 0.37 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = +2 Query: 419 NKLTKTTLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVIK 568 N L+K+ NL + +N++I +E L +FP L Y+DLS N I+ Sbjct: 57 NSLSKSNFQALPNL-QYLDLSNNSIRDIEETLLDSFPGLKYLDLSWNKIR 105 >AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical protein Y46H3D.6 protein. Length = 345 Score = 31.5 bits (68), Expect = 0.49 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +3 Query: 180 ENECLRRVCCRCKITWIMQVGVKCGRVL 263 EN+ LRR+C +C+ +QVG++ VL Sbjct: 56 ENQVLRRLCAKCRYEKCVQVGMRTSAVL 83 >Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical protein F20D1.7 protein. Length = 695 Score = 29.9 bits (64), Expect = 1.5 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = +2 Query: 461 LDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVIKKTGTACSRSSV 601 + +I N+ I + + +F+ P L +DLSGN + + T+ S+V Sbjct: 152 IQRVILRNNQIKSIGVHVFRYMPTLKMLDLSGNNMTRLVTSDFTSAV 198 >AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical protein T05H4.3 protein. Length = 1152 Score = 29.1 bits (62), Expect = 2.6 Identities = 8/21 (38%), Positives = 18/21 (85%) Frame = +2 Query: 503 EIDLFKTFPRLSYIDLSGNVI 565 +++L KT P+L+++D+S N++ Sbjct: 754 DVELLKTMPKLTHLDMSNNIL 774 >Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein F14F4.3b protein. Length = 1427 Score = 28.3 bits (60), Expect = 4.6 Identities = 17/58 (29%), Positives = 27/58 (46%) Frame = -1 Query: 562 NVSAQIDVRQSWKCFEQINFEVVNIRVCPDYCI*EVSVFGERRLS*LVVLDGRIGAGQ 389 N +D+ SW QINF VN+R + + + E + V + GR G+G+ Sbjct: 1100 NTRQGLDIESSWPANGQINFSEVNLRYRKSHPLALNDITFEIKGGEKVGIIGRTGSGK 1157 >Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein F14F4.3a protein. Length = 1400 Score = 28.3 bits (60), Expect = 4.6 Identities = 17/58 (29%), Positives = 27/58 (46%) Frame = -1 Query: 562 NVSAQIDVRQSWKCFEQINFEVVNIRVCPDYCI*EVSVFGERRLS*LVVLDGRIGAGQ 389 N +D+ SW QINF VN+R + + + E + V + GR G+G+ Sbjct: 1073 NTRQGLDIESSWPANGQINFSEVNLRYRKSHPLALNDITFEIKGGEKVGIIGRTGSGK 1130 >U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical protein K03A1.2b protein. Length = 584 Score = 28.3 bits (60), Expect = 4.6 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = +2 Query: 377 DDEHLTCSNTSVQDNKLTKT-TLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLS 553 D E +T T + ++L L K+ + + + + I +++ D+FK F L+ + LS Sbjct: 177 DFEPITAKFTKNKISRLQNDKVLPKFEKFVSILDVSYNEIRFIDNDVFKPFTNLTKLYLS 236 Query: 554 GNVIK 568 NV++ Sbjct: 237 HNVLQ 241 >U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical protein K03A1.2a protein. Length = 586 Score = 28.3 bits (60), Expect = 4.6 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = +2 Query: 377 DDEHLTCSNTSVQDNKLTKT-TLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLS 553 D E +T T + ++L L K+ + + + + I +++ D+FK F L+ + LS Sbjct: 177 DFEPITAKFTKNKISRLQNDKVLPKFEKFVSILDVSYNEIRFIDNDVFKPFTNLTKLYLS 236 Query: 554 GNVIK 568 NV++ Sbjct: 237 HNVLQ 241 >AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical protein F14F4.3b protein. Length = 1427 Score = 28.3 bits (60), Expect = 4.6 Identities = 17/58 (29%), Positives = 27/58 (46%) Frame = -1 Query: 562 NVSAQIDVRQSWKCFEQINFEVVNIRVCPDYCI*EVSVFGERRLS*LVVLDGRIGAGQ 389 N +D+ SW QINF VN+R + + + E + V + GR G+G+ Sbjct: 1100 NTRQGLDIESSWPANGQINFSEVNLRYRKSHPLALNDITFEIKGGEKVGIIGRTGSGK 1157 >AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical protein F14F4.3a protein. Length = 1400 Score = 28.3 bits (60), Expect = 4.6 Identities = 17/58 (29%), Positives = 27/58 (46%) Frame = -1 Query: 562 NVSAQIDVRQSWKCFEQINFEVVNIRVCPDYCI*EVSVFGERRLS*LVVLDGRIGAGQ 389 N +D+ SW QINF VN+R + + + E + V + GR G+G+ Sbjct: 1073 NTRQGLDIESSWPANGQINFSEVNLRYRKSHPLALNDITFEIKGGEKVGIIGRTGSGK 1130 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,489,467 Number of Sequences: 27780 Number of extensions: 233920 Number of successful extensions: 709 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 686 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 708 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1321669750 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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