Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k12f
         (613 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81130-10|CAB03418.1|  653|Caenorhabditis elegans Hypothetical p...    39   0.002
Z81130-9|CAI70413.1|  616|Caenorhabditis elegans Hypothetical pr...    39   0.002
AF304125-1|AAG50238.1|  542|Caenorhabditis elegans 1D304 protein.      37   0.013
AC024201-8|AAF36020.1|  542|Caenorhabditis elegans Hypothetical ...    37   0.013
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr...    32   0.37 
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr...    32   0.37 
AC006777-3|AAK72309.1|  345|Caenorhabditis elegans Hypothetical ...    31   0.49 
Z78542-6|CAB01749.2|  695|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical...    29   2.6  
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U41625-2|ABS19463.1|  584|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U41625-1|AAA83325.2|  586|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ...    28   4.6  
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ...    28   4.6  

>Z81130-10|CAB03418.1|  653|Caenorhabditis elegans Hypothetical
           protein T23G11.6a protein.
          Length = 653

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 15/35 (42%), Positives = 27/35 (77%)
 Frame = +2

Query: 461 LDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVI 565
           L+T++++N+ ++ L +D FK   +LSY+D+SGN I
Sbjct: 160 LETVVFSNNKLDSLGVDQFKNKKQLSYLDVSGNFI 194


>Z81130-9|CAI70413.1|  616|Caenorhabditis elegans Hypothetical
           protein T23G11.6b protein.
          Length = 616

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 15/35 (42%), Positives = 27/35 (77%)
 Frame = +2

Query: 461 LDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVI 565
           L+T++++N+ ++ L +D FK   +LSY+D+SGN I
Sbjct: 160 LETVVFSNNKLDSLGVDQFKNKKQLSYLDVSGNFI 194


>AF304125-1|AAG50238.1|  542|Caenorhabditis elegans 1D304 protein.
          Length = 542

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 21/57 (36%), Positives = 33/57 (57%)
 Frame = +2

Query: 389 LTCSNTSVQDNKLTKTTLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGN 559
           L  SN  +  ++L+   L+ Y NL + +I  N++I +L  D+F T P L  +DLS N
Sbjct: 51  LDLSNNRI--SRLSADELSLYPNL-EQLILHNNSITHLSADVFSTLPSLRVLDLSSN 104


>AC024201-8|AAF36020.1|  542|Caenorhabditis elegans Hypothetical
           protein Y71F9B.8 protein.
          Length = 542

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 21/57 (36%), Positives = 33/57 (57%)
 Frame = +2

Query: 389 LTCSNTSVQDNKLTKTTLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGN 559
           L  SN  +  ++L+   L+ Y NL + +I  N++I +L  D+F T P L  +DLS N
Sbjct: 51  LDLSNNRI--SRLSADELSLYPNL-EQLILHNNSITHLSADVFSTLPSLRVLDLSSN 104


>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical
           protein K09C8.5 protein.
          Length = 1328

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +2

Query: 419 NKLTKTTLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVIK 568
           N L+K+      NL   +  +N++I  +E  L  +FP L Y+DLS N I+
Sbjct: 57  NSLSKSNFQALPNL-QYLDLSNNSIRDIEETLLDSFPGLKYLDLSWNKIR 105


>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical
           protein K09C8.5 protein.
          Length = 1328

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +2

Query: 419 NKLTKTTLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVIK 568
           N L+K+      NL   +  +N++I  +E  L  +FP L Y+DLS N I+
Sbjct: 57  NSLSKSNFQALPNL-QYLDLSNNSIRDIEETLLDSFPGLKYLDLSWNKIR 105


>AC006777-3|AAK72309.1|  345|Caenorhabditis elegans Hypothetical
           protein Y46H3D.6 protein.
          Length = 345

 Score = 31.5 bits (68), Expect = 0.49
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 180 ENECLRRVCCRCKITWIMQVGVKCGRVL 263
           EN+ LRR+C +C+    +QVG++   VL
Sbjct: 56  ENQVLRRLCAKCRYEKCVQVGMRTSAVL 83


>Z78542-6|CAB01749.2|  695|Caenorhabditis elegans Hypothetical
           protein F20D1.7 protein.
          Length = 695

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +2

Query: 461 LDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVIKKTGTACSRSSV 601
           +  +I  N+ I  + + +F+  P L  +DLSGN + +  T+   S+V
Sbjct: 152 IQRVILRNNQIKSIGVHVFRYMPTLKMLDLSGNNMTRLVTSDFTSAV 198


>AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical
           protein T05H4.3 protein.
          Length = 1152

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 8/21 (38%), Positives = 18/21 (85%)
 Frame = +2

Query: 503 EIDLFKTFPRLSYIDLSGNVI 565
           +++L KT P+L+++D+S N++
Sbjct: 754 DVELLKTMPKLTHLDMSNNIL 774


>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
            F14F4.3b protein.
          Length = 1427

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -1

Query: 562  NVSAQIDVRQSWKCFEQINFEVVNIRVCPDYCI*EVSVFGERRLS*LVVLDGRIGAGQ 389
            N    +D+  SW    QINF  VN+R    + +    +  E +    V + GR G+G+
Sbjct: 1100 NTRQGLDIESSWPANGQINFSEVNLRYRKSHPLALNDITFEIKGGEKVGIIGRTGSGK 1157


>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
            F14F4.3a protein.
          Length = 1400

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -1

Query: 562  NVSAQIDVRQSWKCFEQINFEVVNIRVCPDYCI*EVSVFGERRLS*LVVLDGRIGAGQ 389
            N    +D+  SW    QINF  VN+R    + +    +  E +    V + GR G+G+
Sbjct: 1073 NTRQGLDIESSWPANGQINFSEVNLRYRKSHPLALNDITFEIKGGEKVGIIGRTGSGK 1130


>U41625-2|ABS19463.1|  584|Caenorhabditis elegans Hypothetical
           protein K03A1.2b protein.
          Length = 584

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +2

Query: 377 DDEHLTCSNTSVQDNKLTKT-TLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLS 553
           D E +T   T  + ++L     L K+   +  +  + + I +++ D+FK F  L+ + LS
Sbjct: 177 DFEPITAKFTKNKISRLQNDKVLPKFEKFVSILDVSYNEIRFIDNDVFKPFTNLTKLYLS 236

Query: 554 GNVIK 568
            NV++
Sbjct: 237 HNVLQ 241


>U41625-1|AAA83325.2|  586|Caenorhabditis elegans Hypothetical
           protein K03A1.2a protein.
          Length = 586

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +2

Query: 377 DDEHLTCSNTSVQDNKLTKT-TLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLS 553
           D E +T   T  + ++L     L K+   +  +  + + I +++ D+FK F  L+ + LS
Sbjct: 177 DFEPITAKFTKNKISRLQNDKVLPKFEKFVSILDVSYNEIRFIDNDVFKPFTNLTKLYLS 236

Query: 554 GNVIK 568
            NV++
Sbjct: 237 HNVLQ 241


>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
            protein F14F4.3b protein.
          Length = 1427

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -1

Query: 562  NVSAQIDVRQSWKCFEQINFEVVNIRVCPDYCI*EVSVFGERRLS*LVVLDGRIGAGQ 389
            N    +D+  SW    QINF  VN+R    + +    +  E +    V + GR G+G+
Sbjct: 1100 NTRQGLDIESSWPANGQINFSEVNLRYRKSHPLALNDITFEIKGGEKVGIIGRTGSGK 1157


>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
            protein F14F4.3a protein.
          Length = 1400

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -1

Query: 562  NVSAQIDVRQSWKCFEQINFEVVNIRVCPDYCI*EVSVFGERRLS*LVVLDGRIGAGQ 389
            N    +D+  SW    QINF  VN+R    + +    +  E +    V + GR G+G+
Sbjct: 1073 NTRQGLDIESSWPANGQINFSEVNLRYRKSHPLALNDITFEIKGGEKVGIIGRTGSGK 1130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,489,467
Number of Sequences: 27780
Number of extensions: 233920
Number of successful extensions: 709
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)