Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k11r
         (772 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.031
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    27   0.13 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.7  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    23   3.6  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   3.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   6.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   6.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.2  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 0.031
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +2

Query: 569 LFMQFIYCIIYAFKNLLLFIL-VRKFLKYFCLFGYQWLFRFLPVTFFKR*LLLTCCQ*YI 745
           L + + YC    F   LLF+L +  F   F +F    LF    + F    L L C   + 
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFT 203

Query: 746 LHL 754
           LHL
Sbjct: 204 LHL 206



 Score = 25.4 bits (53), Expect = 0.51
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +3

Query: 435 IHYILNLCLYYLRMKVYIFQSTKYQFFIYYI*ILKIA-KMCAEIKICLCNSFTVLFMHLK 611
           +H +  LC+YY  + ++      Y +  + I  + +   +C     C   +F +  MHL 
Sbjct: 125 VHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFC---AFIIFTMHLL 181

Query: 612 IC 617
            C
Sbjct: 182 FC 183



 Score = 25.4 bits (53), Expect = 0.51
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
 Frame = +3

Query: 432 NIHYILNLCLYYLRMKVYIFQSTKYQFFIYYI*ILKIAKMCAEIKICLC-----NSFTVL 596
           N+H +  LCL Y  + +       Y +  + I  + +   C  I I LC      +F + 
Sbjct: 190 NMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLI-ILLCIYYFYYAFILF 248

Query: 597 FMH--LKICYYSFW 632
            +H  L +C Y F+
Sbjct: 249 TVHLLLLVCIYYFY 262



 Score = 23.4 bits (48), Expect = 2.0
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
 Frame = +3

Query: 435 IHYILNLCLYYLRMKVYIFQSTKYQFFIYYI*ILKIAKM-CA-EIKICL---CNSFTVLF 599
           +H +L +C+YY      +F      F ++ + +L I    CA  I +C+   C +F +  
Sbjct: 250 VHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFP 309

Query: 600 MHLKICYYSFW 632
            H   C +S +
Sbjct: 310 THF-YCAFSLY 319



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +2

Query: 581 FIYCIIYAFKNLLLFILVRKFLKYFCLF 664
           + YC+   F   LLF+L   +     LF
Sbjct: 58  YFYCVSITFNVHLLFLLCSGYFTVHLLF 85



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 571 VYAIHLLYYLCI 606
           ++ +HLL+ LCI
Sbjct: 122 IFTVHLLFLLCI 133


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 332 KTYLTTISCSYYSKEDIS 385
           KTY    +CSYYS +D+S
Sbjct: 107 KTYSNVTTCSYYSLDDLS 124


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
 Frame = +3

Query: 423 FKINIHYILNLC--LYYLRMK 479
           F IN+ Y+L LC  +YY R +
Sbjct: 105 FVINVLYVLTLCYAVYYWRQQ 125


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/16 (62%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = -3

Query: 236 YKTNKV-KINGSCIYV 192
           ++TN V K NGSC+YV
Sbjct: 104 FQTNVVVKHNGSCLYV 119


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/16 (62%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = -3

Query: 236 YKTNKV-KINGSCIYV 192
           ++TN V K NGSC+YV
Sbjct: 104 FQTNVVVKHNGSCLYV 119


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 237 SLYFNLPHHSSRNALLFHSRNRQI 308
           +LYF +PH  + NA    SR+  +
Sbjct: 332 TLYFRMPHKCNGNAHNCPSRSHPV 355


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 237 SLYFNLPHHSSRNALLFHSRNRQI 308
           +LYF +PH  + NA    SR+  +
Sbjct: 339 TLYFRMPHKCNGNAHNCPSRSHPV 362


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +2

Query: 650 YFCLFGY 670
           YFC+FGY
Sbjct: 258 YFCIFGY 264


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +2

Query: 650 YFCLFGY 670
           YFC+FGY
Sbjct: 83  YFCIFGY 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,657
Number of Sequences: 336
Number of extensions: 3972
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)