Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k11f
(618 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VF89 Cluster: 39S ribosomal protein L9, mitochondrial... 170 3e-41
UniRef50_UPI00015B4A4B Cluster: PREDICTED: similar to mitochondr... 168 8e-41
UniRef50_UPI0000DB7044 Cluster: PREDICTED: similar to mitochondr... 159 5e-38
UniRef50_UPI0000D56AF8 Cluster: PREDICTED: similar to CG31478-PA... 158 9e-38
UniRef50_Q9BYD2 Cluster: 39S ribosomal protein L9, mitochondrial... 83 5e-15
UniRef50_Q5SZR1 Cluster: Mitochondrial ribosomal protein L9; n=1... 76 6e-13
UniRef50_UPI0000588FBB Cluster: PREDICTED: similar to mitochondr... 76 8e-13
UniRef50_Q95X39 Cluster: Putative uncharacterized protein; n=2; ... 68 2e-10
UniRef50_Q5DC77 Cluster: SJCHGC06284 protein; n=1; Schistosoma j... 52 1e-05
UniRef50_Q54QM2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_A7S9U8 Cluster: Predicted protein; n=1; Nematostella ve... 43 0.007
UniRef50_Q1AXR0 Cluster: 50S ribosomal protein L9; n=1; Rubrobac... 36 1.0
UniRef50_Q5HBE7 Cluster: Putative integral membrane protein; n=2... 35 1.4
UniRef50_Q2IA87 Cluster: Chloroplast 50S ribosomal protein L9; n... 35 1.8
UniRef50_P42352 Cluster: 50S ribosomal protein L9; n=31; Cyanoba... 35 1.8
UniRef50_A5P2S6 Cluster: Putative uncharacterized protein; n=1; ... 34 2.4
UniRef50_Q2IM65 Cluster: 50S ribosomal protein L9; n=6; Deltapro... 34 2.4
UniRef50_A6GKV3 Cluster: 2-hydroxychromene-2-carboxylate isomera... 34 3.1
UniRef50_Q1MRG7 Cluster: 50S ribosomal protein L9; n=5; Desulfov... 34 3.1
UniRef50_Q9LTQ0 Cluster: Similarity to CAF protein; n=3; core eu... 33 4.1
UniRef50_Q5CGV1 Cluster: Binding protein; n=2; Cryptosporidium|R... 33 5.5
UniRef50_Q0STM0 Cluster: CoA-substrate-specific enzyme activase,... 33 7.2
UniRef50_UPI0000E4955C Cluster: PREDICTED: hypothetical protein;... 32 9.5
UniRef50_A6CAL8 Cluster: Ribosomal protein L9; n=1; Planctomyces... 32 9.5
UniRef50_Q6CK46 Cluster: Similar to sp|Q04279 Saccharomyces cere... 32 9.5
>UniRef50_Q9VF89 Cluster: 39S ribosomal protein L9, mitochondrial
precursor; n=4; Diptera|Rep: 39S ribosomal protein L9,
mitochondrial precursor - Drosophila melanogaster (Fruit
fly)
Length = 248
Score = 170 bits (413), Expect = 3e-41
Identities = 77/156 (49%), Positives = 108/156 (69%), Gaps = 2/156 (1%)
Frame = +3
Query: 147 TMFSQQTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFV 326
T QQ R TF+L+R++ PPLHK K +M+ ++F+Y+LV+DT VKK+P+I +VL FV
Sbjct: 17 TSLQQQVRTTFVLKRKYDPPLHKTNEKPRRMRAKNFIYELVDDTLVKKRPNIEVVLKTFV 76
Query: 327 EGVGTTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEENT--HSSPFVKR 500
EGVG GDV+++ + Y +LPGLA Y PEN+ K Y K E++T HSSP+ +R
Sbjct: 77 EGVGDKGDVVSMKPHFVYNKLLLPGLAAYNTPENVAK---YAKTEAEKSTVKHSSPYAQR 133
Query: 501 TMDCLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGF 608
T++ L +VL V M+ EPW L+PWH+KAS RK+GF
Sbjct: 134 TVNMLETIVLAVVMNKDEPWVLEPWHIKASLRKTGF 169
>UniRef50_UPI00015B4A4B Cluster: PREDICTED: similar to mitochondrial
ribosomal protein, L9, putative; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to mitochondrial
ribosomal protein, L9, putative - Nasonia vitripennis
Length = 264
Score = 168 bits (409), Expect = 8e-41
Identities = 82/167 (49%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
Frame = +3
Query: 117 SVMKSAII-VPTMFSQQTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKK 293
+V KS + +P QQTRNT IL+R + PPL+KKG ++K R F+Y+LVE+T+VK K
Sbjct: 13 TVAKSLLTAIPNPVVQQTRNTVILKRVYNPPLNKKGCIPRRLKNRSFIYELVENTNVKPK 72
Query: 294 PDIRIVLNQFVEGVGTTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEEN 473
P + I+L Q+VEG G G+ +T+ KAY F+LPGLAVYA+PEN+EKY T + +
Sbjct: 73 PPLDIILTQYVEGYGEKGEKITIKPQKAYNEFLLPGLAVYASPENIEKYLT--SKVTNKK 130
Query: 474 THSSPFVKRTMDCLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVV 614
T+SS FV T+ L R+ L V MS PW L+ WH++ +FR+SGF+V
Sbjct: 131 TYSSLFVPMTIRFLSRICLVVNMSIENPWVLEKWHIRTNFRRSGFIV 177
>UniRef50_UPI0000DB7044 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L9 CG31478-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L9 CG31478-PA - Apis mellifera
Length = 254
Score = 159 bits (386), Expect = 5e-38
Identities = 75/161 (46%), Positives = 111/161 (68%), Gaps = 1/161 (0%)
Frame = +3
Query: 138 IVPTMFSQQTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLN 317
++ + QQ+RNTFIL+R++P PLHKK K+K +HF+Y+L+EDT+VK + I +VL
Sbjct: 4 LINNVLMQQSRNTFILKRKYPVPLHKKYETRAKLKHKHFIYELIEDTNVKPQKKIDVVLL 63
Query: 318 QFVEGVGTTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEE-NTHSSPFV 494
+ V+ +G G+ +++ KAYE ILP LAVYA PENLEKY ++ ++ THSS FV
Sbjct: 64 ENVKKIGGKGEKVSVSSQKAYETLILPKLAVYATPENLEKYLIEDQDEKKKLCTHSSQFV 123
Query: 495 KRTMDCLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVVP 617
+RTM+ L L ++MS PW ++ WH++ SFRK G++VP
Sbjct: 124 ERTMNVLSVCYLSLSMSMDIPWVIEKWHVRVSFRKLGYIVP 164
>UniRef50_UPI0000D56AF8 Cluster: PREDICTED: similar to CG31478-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG31478-PA - Tribolium castaneum
Length = 209
Score = 158 bits (384), Expect = 9e-38
Identities = 75/156 (48%), Positives = 101/156 (64%)
Frame = +3
Query: 150 MFSQQTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVE 329
+ QQ R TF+++RR P L K+G K+K RH++YDLV++T+V+KK DI ++L FVE
Sbjct: 24 LLHQQLRTTFVVKRRIKPFLAKQGEPPKKLKTRHYLYDLVKNTNVEKKSDIEVILTSFVE 83
Query: 330 GVGTTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEENTHSSPFVKRTMD 509
+G GD +T+ N AY + +LPGLAVYA PEN KYK E + SSP +
Sbjct: 84 DLGNMGDKVTVRPNYAYYHLLLPGLAVYATPENEAKYKNTETTNVRH--FSSPRALHVIK 141
Query: 510 CLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVVP 617
L R+ L + M+ PWTLQPWH+K SFRK GF+VP
Sbjct: 142 ALSRISLSIIMNKDSPWTLQPWHVKTSFRKCGFIVP 177
>UniRef50_Q9BYD2 Cluster: 39S ribosomal protein L9, mitochondrial
precursor; n=21; Euteleostomi|Rep: 39S ribosomal protein
L9, mitochondrial precursor - Homo sapiens (Human)
Length = 267
Score = 83.0 bits (196), Expect = 5e-15
Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Frame = +3
Query: 162 QTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVGT 341
Q R T I+ R W PL +G K P++ RH VY LVEDT + K ++ ++L Q VE VG
Sbjct: 49 QNRGTVIVERWWKVPLAGEGRK-PRLHRRHRVYKLVEDTKHRPKENLELILTQSVENVGV 107
Query: 342 TGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEENTHSSPFVK---RTMDC 512
GD++++ + + GLAVYA+PEN + ++ EK +E K T+
Sbjct: 108 RGDLVSVKKSLGRNRLLPQGLAVYASPENKKLFEE-EKLLRQEGKLEKIQTKAGEATVKF 166
Query: 513 LHRLVLRVTMSNSEPWTLQPWHLKASFRKS-GFVV 614
L L V M N+ W L P + F K+ G VV
Sbjct: 167 LKSCRLEVGMKNNVKWELNPEIVARHFFKNLGVVV 201
>UniRef50_Q5SZR1 Cluster: Mitochondrial ribosomal protein L9; n=1;
Homo sapiens|Rep: Mitochondrial ribosomal protein L9 -
Homo sapiens (Human)
Length = 233
Score = 76.2 bits (179), Expect = 6e-13
Identities = 38/94 (40%), Positives = 57/94 (60%)
Frame = +3
Query: 162 QTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVGT 341
Q R T I+ R W PL +G K P++ RH VY LVEDT + K ++ ++L Q VE VG
Sbjct: 49 QNRGTVIVERWWKVPLAGEGRK-PRLHRRHRVYKLVEDTKHRPKENLELILTQSVENVGV 107
Query: 342 TGDVLTLHLNKAYENFILPGLAVYANPENLEKYK 443
GD++++ + + GLAVYA+PEN + ++
Sbjct: 108 RGDLVSVKKSLGRNRLLPQGLAVYASPENKKLFE 141
>UniRef50_UPI0000588FBB Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L9; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L9 - Strongylocentrotus purpuratus
Length = 238
Score = 75.8 bits (178), Expect = 8e-13
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Frame = +3
Query: 159 QQTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVG 338
QQ R ++RR +PPP+ K G K + K H VY + EDT+ + + ++++L + V
Sbjct: 30 QQLRTVVVVRRLFPPPVPKLGEKYTRQKKSHKVYIIEEDTTHRARQKLKLILTEDVP--S 87
Query: 339 TTGDVLTLHLNKAYENFILPGLAVYANPENLEKY-KTYEKRPLE--ENTHSSPFVKRTMD 509
G+V+ + I G AVYA+PEN++++ T +K +E E SP +T+
Sbjct: 88 NRGEVVMVDKRIGRNKLIPSGAAVYASPENIKEFVMTIQKEKVESTEEGRLSPMAMKTIK 147
Query: 510 CLHRLVLRVTMSNSEPWT 563
L + +L V M WT
Sbjct: 148 HLQKNMLEVRMHADSEWT 165
>UniRef50_Q95X39 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 276
Score = 68.1 bits (159), Expect = 2e-10
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 5/157 (3%)
Frame = +3
Query: 159 QQTRNTFILRRRWPPPLHKKGG--KVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEG 332
Q +RNT++LRR + P + GG K P + Y++VE + K I ++L Q VEG
Sbjct: 17 QASRNTWVLRRVFQPEVTPPGGVQKNPNDFHDYQKYEVVEFETQKSAGPINVILLQDVEG 76
Query: 333 VGTTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEE--NTHSSPF-VKRT 503
+G DV+++ A ++ +L AVYA+P +L+ Y + R EE + P+ +K
Sbjct: 77 IGHQFDVVSVDRTLARKDLLLSKKAVYASPFDLKYYSDMKTRMAEELASRIRIPYELKVV 136
Query: 504 MDCLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVV 614
L ++V+ + ++ WT+ +K+S R+ G V
Sbjct: 137 GRDLQKMVIPIKVNMENQWTIDRNLVKSSLRQMGVFV 173
>UniRef50_Q5DC77 Cluster: SJCHGC06284 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06284 protein - Schistosoma
japonicum (Blood fluke)
Length = 244
Score = 51.6 bits (118), Expect = 1e-05
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Frame = +3
Query: 168 RNTFILRRRWP---PPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVG 338
R+ L +++P P L G +PK+ VY+ ++ + + I ++L + V G+G
Sbjct: 18 RHVVTLIKKYPRKVPSLLLAEGILPKLTSSDMVYEEIKSEKDESQC-INVLLTENVPGLG 76
Query: 339 TTGDVLTLHLNKAYENFILPGLAVYANPENLEKYK-TYEKRPLEENTHSSPFVKRTMDCL 515
+ G + +H N+ + + GLA E + + K +RP S +R L
Sbjct: 77 SIGTITPVHRNRFWRYLYIKGLAELPTEERISEMKHKQNERPRVLCGESYVLQQR----L 132
Query: 516 HRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVV 614
+ L V M++ WTL H++ + R+ G V
Sbjct: 133 SNMTLYVPMNSFRDWTLNKTHIRVALRRCGISV 165
>UniRef50_Q54QM2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 187
Score = 43.6 bits (98), Expect = 0.004
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
Frame = +3
Query: 276 TSVKKKPDIRIVLNQFVEGVGTTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEK 455
T KK+ + ++L + V VG G+ L + A F + GLAV+AN EN + Y+ + K
Sbjct: 32 TIAKKRTTLSVILTEDVPKVGQKGEELEVSKGYARNFFFMKGLAVHANHENRKLYEDFSK 91
Query: 456 R----PLEENTHSSPFVKRTMDCLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVV 614
+ +S +K+ V+R N EP + ++ S ++ +V
Sbjct: 92 NIDYSKRKGEKQNSKAIKKITTGGKLFVMRRPQENGEPIEITKDNISYSLKRRRNIV 148
>UniRef50_A7S9U8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 206
Score = 42.7 bits (96), Expect = 0.007
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +3
Query: 288 KKPDIRIVLNQFVEGVGTTGDVLTLHLNKAYENFILP-GLAVYANPENLEKYKTYEKRPL 464
KKP ++L + ++G+G +G ++ + A NF++P AVYA PEN E++ +
Sbjct: 39 KKPKFSVILKEPMDGLGNSGQLVEVERGYA-RNFLIPQAKAVYATPENKERFLVSSEDAA 97
Query: 465 EENTHSSPFVKRTMDCLHRLVLRV 536
+ + + R M L+RL L++
Sbjct: 98 KTDPEAQ-VSSRFMRFLNRLHLKI 120
>UniRef50_Q1AXR0 Cluster: 50S ribosomal protein L9; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: 50S ribosomal protein L9 -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 149
Score = 35.5 bits (78), Expect = 1.0
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +3
Query: 300 IRIVLNQFVEGVGTTGDVLTLHLNKAY-ENFILP-GLAVYANPENLEKYKTYEKRPLEEN 473
++++L Q VE VG GD+ + +++ Y N+++P GLA A P LE+ + + E
Sbjct: 1 MQVILTQDVEKVGRRGDI--VDVSRGYVRNYLVPRGLAEVATPAKLEEARRRMEEAAERE 58
Query: 474 THSSPFVKRTMDCLHRLVLRVTMSNSE 554
+ + + L++ V+ + E
Sbjct: 59 RRLAERAEEIAETLNKSVITIEARTGE 85
>UniRef50_Q5HBE7 Cluster: Putative integral membrane protein; n=2;
Ehrlichia ruminantium|Rep: Putative integral membrane
protein - Ehrlichia ruminantium (strain Welgevonden)
Length = 260
Score = 35.1 bits (77), Expect = 1.4
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = -3
Query: 148 VGTIIADFITEARSPNIFVFFSSEWLILIISNKILLHNGRKVSEEKIKN 2
+G II+ + E +SP IF +LIIS+ +++ N +K +E KN
Sbjct: 183 IGVIISGYFIEHKSPEIFKIILLTTYVLIISSMLIMKNSQKNTELLDKN 231
>UniRef50_Q2IA87 Cluster: Chloroplast 50S ribosomal protein L9; n=1;
Isochrysis galbana|Rep: Chloroplast 50S ribosomal
protein L9 - Isochrysis galbana
Length = 198
Score = 34.7 bits (76), Expect = 1.8
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +3
Query: 222 GKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVGTTGDVLTLHLNKAY-ENFIL- 395
G P ++ R ++ + K D++++L ++G+G+ GD++ + AY +NFIL
Sbjct: 20 GVGPALQPRVAATVMMAKKAAPKGKDVQVILTGEIKGLGSAGDLVA--VKPAYAQNFILT 77
Query: 396 PGLAVYANPENLEK 437
GL A PE L++
Sbjct: 78 KGLGKMATPEMLKQ 91
>UniRef50_P42352 Cluster: 50S ribosomal protein L9; n=31;
Cyanobacteria|Rep: 50S ribosomal protein L9 -
Synechocystis sp. (strain PCC 6803)
Length = 152
Score = 34.7 bits (76), Expect = 1.8
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +3
Query: 300 IRIVLNQFVEGVGTTGDVLTLHLNKAYENFILP-GLAVYANP---ENLEKYKTYEKRPLE 467
+++VLN+ + +G TGD++ + A N+++P GL V A P +E+ + E L+
Sbjct: 5 VKVVLNETINKLGFTGDLVEVAPGYA-RNYLIPKGLGVVATPGILRQVEQRRLKELERLK 63
Query: 468 ENTHSSPFVKRTMDCLHRLVLRVTMSNSE 554
++ K ++ + R V++ + +E
Sbjct: 64 AEKDAAEARKVALETIGRFVIKKQVGEAE 92
>UniRef50_A5P2S6 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 426
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 201 PPLHKKGG-KVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQ 320
P LHK+ G K+P K R V D+V+D + PD ++L +
Sbjct: 345 PELHKRSGSKLPPHKFRQAVEDIVQDAQLSPLPDYDLILEK 385
>UniRef50_Q2IM65 Cluster: 50S ribosomal protein L9; n=6;
Deltaproteobacteria|Rep: 50S ribosomal protein L9 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 149
Score = 34.3 bits (75), Expect = 2.4
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +3
Query: 300 IRIVLNQFVEGVGTTGDVLTLHLNKAYENFILP-GLAVYANPENLEK 437
++++L + VE +G GD++ + N++LP GLAV ANP+N+++
Sbjct: 1 MKLILREDVENLGKGGDLVDVKPGYG-RNYLLPRGLAVSANPKNVKE 46
>UniRef50_A6GKV3 Cluster: 2-hydroxychromene-2-carboxylate isomerase,
putative; n=1; Limnobacter sp. MED105|Rep:
2-hydroxychromene-2-carboxylate isomerase, putative -
Limnobacter sp. MED105
Length = 424
Score = 33.9 bits (74), Expect = 3.1
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 129 SAIIVPTMFSQQTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVK 287
SAI+ P +F R + R+ P+ +G VPK+K + VYD + V+
Sbjct: 248 SAIVAPRIFELGRRTGAKVNLRFVLPMVMRGLPVPKVKREYIVYDTAREAHVR 300
>UniRef50_Q1MRG7 Cluster: 50S ribosomal protein L9; n=5;
Desulfovibrionaceae|Rep: 50S ribosomal protein L9 -
Lawsonia intracellularis (strain PHE/MN1-00)
Length = 173
Score = 33.9 bits (74), Expect = 3.1
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Frame = +3
Query: 300 IRIVLNQFVEGVGTTGDVLTLHLNKAYENFILP-GLAVYANPENLE----KYKTYEKRPL 464
++++L VE +G GD++T+ N++LP GLA+ P N++ ++K ++R
Sbjct: 1 MKVILRSDVENLGRLGDIVTVKSGYG-RNYLLPQGLAMLVTPGNMKVFELEFKKLQERMN 59
Query: 465 EENTHSSPFVKRTMDCLHRLVLR 533
+ + + KR + +++R
Sbjct: 60 DIRSKADELAKRISGLIVTVLMR 82
>UniRef50_Q9LTQ0 Cluster: Similarity to CAF protein; n=3; core
eudicotyledons|Rep: Similarity to CAF protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 391
Score = 33.5 bits (73), Expect = 4.1
Identities = 13/72 (18%), Positives = 37/72 (51%)
Frame = +3
Query: 42 NRILLDIISINHSLEKKTKMFGLRASVMKSAIIVPTMFSQQTRNTFILRRRWPPPLHKKG 221
N+ + +I+ +L K +++F + + + ++ + ++ N L+++WP P++
Sbjct: 276 NKDIARLIAAKEALRKLSEVFPVEMVIDEDSVEIQLTHAKTKLNEICLKKKWPKPIYSVE 335
Query: 222 GKVPKMKGRHFV 257
++G+ FV
Sbjct: 336 EDRSSVQGKRFV 347
>UniRef50_Q5CGV1 Cluster: Binding protein; n=2; Cryptosporidium|Rep:
Binding protein - Cryptosporidium hominis
Length = 764
Score = 33.1 bits (72), Expect = 5.5
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 2 ILYLFLRYFSSIM*Q-NFIRYYKY*PFARKKNKNVWAAGFCYEI 130
+LYLF+R+ SIM F YYK +K+ GFCY++
Sbjct: 604 VLYLFIRHVKSIMSNVTFYEYYKKPEAIKKRFAGRNTEGFCYDM 647
>UniRef50_Q0STM0 Cluster: CoA-substrate-specific enzyme activase,
putative; n=4; Bacteria|Rep: CoA-substrate-specific
enzyme activase, putative - Clostridium perfringens
(strain SM101 / Type A)
Length = 975
Score = 32.7 bits (71), Expect = 7.2
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 399 GLAVYANPENLEKYKTYEKRPLEENTHSSPFVKRTMDCLHRLVLRVTMSN 548
G A+YA +NL++ K K LE TH S K + C +R L + + N
Sbjct: 569 GCALYAKRKNLKESKIISKEDLESFTHKSKIAKCGL-CTNRCNLTINIFN 617
>UniRef50_UPI0000E4955C Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 322
Score = 32.3 bits (70), Expect = 9.5
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 231 PKMKGRHFVYDLVED---TSVKKKPDIRIVLNQFVEGVGTTGDVLTLHLNKAYE 383
P +K RHFVYD V+ +V +PD+R V+ + + D L L L K ++
Sbjct: 242 PFLKRRHFVYDEVKRVHCANVSSRPDVRCVIPLKGKSLPAIDDDLLLKLYKFFQ 295
>UniRef50_A6CAL8 Cluster: Ribosomal protein L9; n=1; Planctomyces
maris DSM 8797|Rep: Ribosomal protein L9 - Planctomyces
maris DSM 8797
Length = 168
Score = 32.3 bits (70), Expect = 9.5
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 291 KPDIRIVLNQFVEGVGTTGDVLTLHLNKAYENFILP-GLAVYANPENLEKYKTYEKRPLE 467
K I ++L + V+ +G GD++ + A NF+LP GLA A N ++KR E
Sbjct: 15 KSSIEVLLAEKVDSLGEQGDIVRVKPGYA-RNFLLPYGLATIATDHNKWMVVQHQKRMAE 73
Query: 468 ENTHSSPFVKRTMDCLHR 521
+K D L +
Sbjct: 74 LEKDRLKSLKNLADKLSK 91
>UniRef50_Q6CK46 Cluster: Similar to sp|Q04279 Saccharomyces
cerevisiae YMR086w; n=1; Kluyveromyces lactis|Rep:
Similar to sp|Q04279 Saccharomyces cerevisiae YMR086w -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 755
Score = 32.3 bits (70), Expect = 9.5
Identities = 28/135 (20%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Frame = +3
Query: 84 EKKTKMFGLRASVMKSAIIVPTMFSQQTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYD 263
EKK + R+S I T+++ + T + PP G +P+ R D
Sbjct: 214 EKKADITHYRSSPSPVPRITKTVYATTAKETSAPVEEFKPPSFGNGTALPQTPERAITKD 273
Query: 264 LVEDTSVKKKPDIRIVLNQFVEGVGTTGDVLTLHLNKAYENFILPGLAVYANP-ENLEKY 440
L++ + +++P I L+ E V D+ + + + + V + P E +
Sbjct: 274 LIDSATEEEQPKIHTDLSVTKEAVEQKIDLDSKQVVEEEHVILTHQKEVTSLPDETINAE 333
Query: 441 KTYEKRPLEENTHSS 485
K +K L++ H++
Sbjct: 334 KETDKESLKKAEHNT 348
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,261,316
Number of Sequences: 1657284
Number of extensions: 11671527
Number of successful extensions: 30959
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 30010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30946
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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