Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k11f
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.67 
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   3.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   3.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.3  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 20/79 (25%), Positives = 33/79 (41%)
 Frame = +3

Query: 234 KMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVGTTGDVLTLHLNKAYENFILPGLAVY 413
           K   +H+   L E +S+  + D R++ N   +         T H    Y +F +   A  
Sbjct: 132 KSSTKHYAALLTERSSLVLRNDFRLMSNNLNKNNVVATGRFTFHKKNLYYSFYISDKA-- 189

Query: 414 ANPENLEKYKTYEKRPLEE 470
           A P +L+ +   E   LEE
Sbjct: 190 ARPRSLQ-FVDSEGNILEE 207


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 175 VFLVCCENIVGTIIADFITEARSPNIFVFFSS 80
           +FL  C      +I+   TEA++  I  FF+S
Sbjct: 1   MFLKLCLLASALLISTHQTEAKTDKILCFFAS 32


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 513 NNPLSFSQMESCEYFLLEDV 454
           NN  ++S + +C Y+ L+D+
Sbjct: 104 NNFKTYSNVTTCSYYSLDDL 123


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -2

Query: 233 RHFTTFLVKWWWPSASQDKSVPCLL*KHCR 144
           R F    + W +P  S+DK    LL K  R
Sbjct: 201 RGFDGLDIDWEYPKGSEDKKNYVLLLKELR 230


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 327 EGVGTTGDVLTLHLNKAYENF 389
           + VGT G +L   L K YE++
Sbjct: 650 DDVGTFGAILKKLLPKVYEDY 670


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 16  PQILFFHYVTEFY*IL 63
           P+I ++H+  E Y +L
Sbjct: 118 PRICYYHFTLELYTVL 133


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 16  PQILFFHYVTEFY*IL 63
           P+I ++H+  E Y +L
Sbjct: 118 PRICYYHFTLELYTVL 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,595
Number of Sequences: 336
Number of extensions: 3321
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)