Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k10r
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.2  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -3

Query: 529 IFVLALLA-MANAQDPVKVVENADSVR-DAKKRYGVNVVDNNNPGHVNVVD 383
           IF+  L++  ++A D ++     +  R D+ K   + ++ N N G + ++D
Sbjct: 36  IFLRELISNSSDALDKIRYESLTNPSRLDSGKELYIKIIPNKNDGTLTIID 86


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 195  PKITTLMETATNLSTTVHITWTLPKADLTSSLPLS 91
            P++TT ++T  + +  +H  WT   +   SS   S
Sbjct: 1015 PQVTTGVDTGASSTEHMHPDWTTKPSTWWSSTTTS 1049


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 214 PYIVNPPKDYNPNGNGYE 161
           P+IV  P++ NP+   Y+
Sbjct: 192 PFIVRVPEEDNPHAKLYD 209


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 470 FHYLNWVLSVGHSQQSEDENLKKIRFIYTM 559
           FH   +  +V    +S D+N+KKI   + +
Sbjct: 597 FHLHGYAFNVVGIGRSPDQNVKKINLKHAL 626


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,728
Number of Sequences: 336
Number of extensions: 3541
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)