Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k10r
(675 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19623| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_7058| Best HMM Match : Collagen (HMM E-Value=0.018) 37 0.017
SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30) 32 0.37
SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3) 31 0.64
SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9) 31 0.85
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 31 0.85
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 31 1.1
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_3546| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29) 30 1.5
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_39796| Best HMM Match : VWA (HMM E-Value=0) 29 3.4
SB_51592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37) 29 4.5
SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024) 28 6.0
SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22) 28 6.0
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_3024| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_19623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = -3
Query: 427 NVVDNNNPGHVNVVDNNHPGHVLISNPDPGFSRPVIGQPGYVPISTGPAY 278
+V+ +PG V ++ + PGHV+I DPG +IG PGYV I P Y
Sbjct: 68 HVIIIGDPGDVMIIGD--PGHVMIIG-DPGHMM-IIGDPGYVMIIGDPGY 113
Score = 35.1 bits (77), Expect = 0.052
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = -3
Query: 427 NVVDNNNPGHVNVVDNNHPGHVLISNPDPGFSRPVIGQPGYVPISTGPAYV 275
+V+ +PG V ++ + PGHV+I DPG +IG PGYV I P ++
Sbjct: 122 HVIIIGDPGDVMIIGD--PGHVMIIG-DPGHMM-IIGDPGYVMIIGDPGHL 168
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -3
Query: 436 YGVNVVDNNNPGHVNVVDNNHPGHVLISNPDPGFSRPVIGQPGYVPISTGPAYV 275
YG+ + D PGHV ++ + PG V+I DPG +IG PG++ I P YV
Sbjct: 59 YGMIIGD---PGHVIIIGD--PGDVMIIG-DPGHVM-IIGDPGHMMIIGDPGYV 105
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -3
Query: 436 YGVNVVDNNNPGHVNVVDNNHPGHVLISNPDPGFSRPVIGQPGYVPISTGPAYV 275
YG+ + D PGHV ++ + PG V+I DPG +IG PG++ I P YV
Sbjct: 113 YGMIIGD---PGHVIIIGD--PGDVMIIG-DPGHVM-IIGDPGHMMIIGDPGYV 159
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -3
Query: 409 NPGHVNVVDNNHPGHVLISNPDPGFSRPVIGQPGYVPISTGPAY 278
+PGH+ ++ + PGHV+I DP +IG PG+V I P Y
Sbjct: 20 DPGHMIIIGD--PGHVMIIG-DPDHLM-IIGDPGHVMIIGDPGY 59
>SB_7058| Best HMM Match : Collagen (HMM E-Value=0.018)
Length = 188
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = -3
Query: 427 NVVDNNNPGHVNVVDNNHPGHVLISNPDPGFSRPVIGQPGYVPISTGPAY 278
+V+ +PG V ++ + PGHV+I DPG +IG PGYV I P Y
Sbjct: 62 HVIIIGDPGDVMIIGD--PGHVMIIG-DPGHMM-IIGDPGYVMIIGDPGY 107
Score = 35.1 bits (77), Expect = 0.052
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = -3
Query: 427 NVVDNNNPGHVNVVDNNHPGHVLISNPDPGFSRPVIGQPGYVPISTGPAYV 275
+V+ +PG V ++ + PGHV+I DPG +IG PGYV I P ++
Sbjct: 116 HVIIIGDPGDVMIIGD--PGHVMIIG-DPGHMM-IIGDPGYVMIIGDPGHL 162
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -3
Query: 436 YGVNVVDNNNPGHVNVVDNNHPGHVLISNPDPGFSRPVIGQPGYVPISTGPAYV 275
YG+ + D PGHV ++ + PG V+I DPG +IG PG++ I P YV
Sbjct: 53 YGMIIGD---PGHVIIIGD--PGDVMIIG-DPGHVM-IIGDPGHMMIIGDPGYV 99
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -3
Query: 436 YGVNVVDNNNPGHVNVVDNNHPGHVLISNPDPGFSRPVIGQPGYVPISTGPAYV 275
YG+ + D PGHV ++ + PG V+I DPG +IG PG++ I P YV
Sbjct: 107 YGMIIGD---PGHVIIIGD--PGDVMIIG-DPGHVM-IIGDPGHMMIIGDPGYV 153
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -3
Query: 409 NPGHVNVVDNNHPGHVLISNPDPGFSRPVIGQPGYVPISTGPAY 278
+PGH+ ++ + PGHV+I DP +IG PG+V I P Y
Sbjct: 14 DPGHMIIIGD--PGHVMIIG-DPDHLM-IIGDPGHVMIIGDPGY 53
>SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30)
Length = 3015
Score = 32.3 bits (70), Expect = 0.37
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = -1
Query: 240 TATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAVGSKEY 61
T ++ TT T+ I ITT T TT HI T+P A + +++ + + +
Sbjct: 1095 TTAHINTTITTAHINTTITTAHINTT--ITTAHINTTIPTAHINTTITTAHTNTTITTAH 1152
Query: 60 LRKLITK*CINQYISKFHMN 1
+ IT IN I+ H+N
Sbjct: 1153 INTTITTAHINTTITTAHIN 1172
>SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)
Length = 1165
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -1
Query: 240 TATNLLTTARTSLILPKITTLMETA--TNLSTTVHITWTLPKADLTSSLPLSLVLAV 76
T T L T L L ITTL+ T + V IT TLP +T++LPL ++ +
Sbjct: 541 TTTLPLVVITTILPLVTITTLLPLVVITTILPLVVITTTLPLVAITTTLPLVIITTI 597
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = -1
Query: 207 SLILPKITTLMETATNLSTTVH---ITWTLPKADLTSSLPL 94
+L L ITT++ T ++TT+H IT TLP +T+ LPL
Sbjct: 516 TLPLVVITTILHLVT-ITTTLHLVTITTTLPLVVITTILPL 555
>SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9)
Length = 678
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -1
Query: 225 LTTARTSLILPKITT--LMETATNLSTTVHITWTLPKADLTSSLPLSLVLAV 76
L T T+L L ITT L+ T + V IT TLP +T+ LPL ++ +
Sbjct: 282 LVTITTTLPLVVITTILLLVVITTILPLVAITTTLPLVAITTILPLVVITTI 333
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1
Query: 240 TATNLLTTARTSLILPKITTLMETA--TNLSTTVHITWTLPKADLTSSLPLSLVLAV 76
T T L T L L ITT++ T + V IT TLP +T+ LPL + +
Sbjct: 619 TTTLPLVVITTILPLVAITTILPLVAITTILPLVVITTTLPLVTITTILPLVAITTI 675
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = -1
Query: 285 LRT*TGPTTDPKGQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTS 106
L T P T + T T A + + PK TT +ET TTV + T P + TS
Sbjct: 755 LETSIVPETTAASETTVAPETTDAPATTLAPKTTTALETTVAAKTTV-VPETTPALETTS 813
Query: 105 S 103
+
Sbjct: 814 A 814
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 267 PTTDPKGQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSS 103
P T + T T A + + PK TT +ET TTV + T P + TS+
Sbjct: 2276 PETTAAPETTVAPETTDAPATTLAPKTTTALETTVEAKTTV-VPETTPALETTSA 2329
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 267 PTTDPKGQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSS 103
P T + T T A + + PK TT +ET TTV + T P + TS+
Sbjct: 214 PETTAAPETTVAPETTDAPATTLAPKTTTALETTVEAKTTV-VPETTPALETTSA 267
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Frame = -3
Query: 235 YEPIDNRPYIVNPPKDYNPNGNG-YEPIDNGAY--YVDPPQGRPYFKPTPFP 89
Y P N PY P Y P N Y P N Y +PP P + P P P
Sbjct: 116 YPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNP 167
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Frame = -3
Query: 235 YEPIDNRPYIVNPPKDYNPNGNG-YEPIDNGAY----YVDPPQGRPYFKPTPFP 89
Y P N PY P Y P+ N Y P N Y Y PP P P P P
Sbjct: 124 YPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPP 177
>SB_3546| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29)
Length = 447
Score = 30.3 bits (65), Expect = 1.5
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Frame = -3
Query: 400 HVNVVDNNHPGHVLISNPDPGFSRPVI-GQPGY-VPISTG-PAYVXXXXXXXXXXXNGYE 230
H+ +D + G P ++ P+ GQP Y P TG P Y NG
Sbjct: 267 HITYLDKSDTGPSFSGQPP--YNNPLFTGQPPYNAPPFTGQPPY-------NAPPFNGQP 317
Query: 229 PIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPG 86
P + P+ PP Y P NG +P+ Y+ P G+P + PF G
Sbjct: 318 PYNTPPFNGQPPY-YTPPFNG-QPL----YHTPPFNGQPPYNTPPFNG 359
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 279 T*TGPTTDPKGQETATNLLTTARTSLILPKITTLME-TATNLSTTVHITWTLPKADLTS 106
T T P + T +L+TTA + +TT E T +L+TT + T P+ S
Sbjct: 156 TTTAPEATTAPETTTASLVTTAPETTTASLVTTAPEATTASLATTASLATTAPETTTAS 214
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Frame = -1
Query: 273 TGPTTDPKGQETATNLLTTARTSLILPKITTLMETATNL-------STTVHITWTLPKAD 115
T P T T TTA + P+ TT ET T L +TT + T P+A
Sbjct: 549 TAPETTTASLVTTAPEATTASLATTAPEATTAPETTTALLVTTAPETTTASLVTTAPEA- 607
Query: 114 LTSSLPLSLVLAVGSKE 64
T+SL + LA + E
Sbjct: 608 TTASLATTASLATTAPE 624
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/64 (34%), Positives = 27/64 (42%)
Frame = -1
Query: 282 RT*TGPTTDPKGQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSS 103
+T P T + TATN TA +PK TT ET TTV T D S
Sbjct: 343 KTTAAPETTSVPETTATN---TAPDKTAVPKTTTAPETTDASKTTVETQQTTYSRDPEIS 399
Query: 102 LPLS 91
+ +S
Sbjct: 400 VTIS 403
>SB_39796| Best HMM Match : VWA (HMM E-Value=0)
Length = 2119
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -1
Query: 279 T*TGPTTDPK-GQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSS 103
T T TT+ K T+T++LTT T + TT+ TAT TT T ++TS+
Sbjct: 2051 TKTHATTETKVSTATSTSVLTTTNTHHVTSTSTTV-STATKTETTTATHHTTKLEEITST 2109
>SB_51592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -1
Query: 240 TATNLLTTARTSLILPKITTLMETATNLSTTVH--ITWTLPKADLTSSLPLSLV 85
T + ++TT + +I ITT+ + T L+TT+ I LP TS PL ++
Sbjct: 20 TISQIITTL-SRIITDPITTISQIITTLATTISQIIRTPLPIITTTSRTPLRII 72
>SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37)
Length = 352
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 240 TATNLLTTARTSLILPKITTLMETATNLSTTVHITWTL 127
T TN++TTA T+ I+T+ T T +T + I T+
Sbjct: 297 TNTNIITTATTTTTSTTISTITVTITTTTTIIIIVITI 334
>SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1130
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 293 TYWHVSGLTDYGPRKARIRVRDENVTRMV 379
TY+ G D+GPR AR+ D++V + V
Sbjct: 979 TYFIKKGKWDFGPRNARLYKEDDSVYKRV 1007
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -1
Query: 237 ATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTS 106
AT +TT ++ P TT TAT +TT T T P A T+
Sbjct: 96 ATATITTYTATVTAPNATTTTPTATTTTTTT-TTTTTPYATTTT 138
>SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)
Length = 249
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 246 QETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLA 79
Q T TT + ITT T T +STT+ T T T++ +++++
Sbjct: 80 QNGTTTTTTTFSATTTTTTITTTTTTTTTISTTISTTTTTTTISTTTTTITAVIIS 135
>SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22)
Length = 266
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/59 (25%), Positives = 35/59 (59%)
Frame = -1
Query: 252 KGQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAV 76
K + + TN++TT+ T++I T+ T T ++ T+ IT T+ +T ++ +++ + +
Sbjct: 162 KERASNTNIITTSNTNIITTTTITITITIT-ITITITITITI-TITITITITITITITI 218
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +2
Query: 35 HYFVINFLRYSLLPTASTRERGRLEVRSALGRVHVICT 148
HY + F R PT S R R R E A RVHV C+
Sbjct: 973 HYLKVGFERLPSPPTNSRRRRLRSE---ADARVHVTCS 1007
>SB_3024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 806
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 182 P*WKRLRTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNILEN 51
P + L T + CI R +PT + P PW +++N+ ++
Sbjct: 560 PRLEMLNTLLRECIDRHAPLKPTKMTRPPAPWLKELDIQNLQQD 603
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,068,613
Number of Sequences: 59808
Number of extensions: 448576
Number of successful extensions: 1634
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1605
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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