Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k10f
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   3.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 147 IFVLALLA-MANAQDPVKVVENADSVR-DAKKRYGVNVVDNNNPGHVNVVD 293
           IF+  L++  ++A D ++     +  R D+ K   + ++ N N G + ++D
Sbjct: 36  IFLRELISNSSDALDKIRYESLTNPSRLDSGKELYIKIIPNKNDGTLTIID 86


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 546 PPQGRPYFRPTPF 584
           PPQG PY R  P+
Sbjct: 74  PPQGMPYPRFPPY 86


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 481  PKITTLMETATNLSTTVHITWT 546
            P++TT ++T  + +  +H  WT
Sbjct: 1015 PQVTTGVDTGASSTEHMHPDWT 1036


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 462 PYIVNPPKDYNPNGNGYE 515
           P+IV  P++ NP+   Y+
Sbjct: 192 PFIVRVPEEDNPHAKLYD 209


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 206 FHYLNWVLSVGHSQQSEDENLKKIRFIYTM 117
           FH   +  +V    +S D+N+KKI   + +
Sbjct: 597 FHLHGYAFNVVGIGRSPDQNVKKINLKHAL 626


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,139
Number of Sequences: 336
Number of extensions: 3074
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)