Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k09r
(745 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U90223-1|AAB94642.1| 252|Homo sapiens deoxyuridine triphosphate... 212 1e-54
U62891-1|AAC51123.1| 164|Homo sapiens deoxyuridine triphosphata... 212 1e-54
U31930-1|AAC50418.1| 164|Homo sapiens deoxyuridine nucleotidohy... 212 1e-54
M89913-1|AAA58444.1| 141|Homo sapiens dUTP pyrophosphatase prot... 212 1e-54
L11877-1|AAA36801.1| 141|Homo sapiens dUTP nucleotidohydrolase ... 212 1e-54
CR541781-1|CAG46580.1| 164|Homo sapiens DUT protein. 212 1e-54
CR541720-1|CAG46521.1| 164|Homo sapiens DUT protein. 212 1e-54
BC110377-1|AAI10378.1| 252|Homo sapiens dUTP pyrophosphatase pr... 212 1e-54
BC070339-1|AAH70339.1| 252|Homo sapiens dUTP pyrophosphatase pr... 212 1e-54
BC033645-1|AAH33645.1| 164|Homo sapiens dUTP pyrophosphatase pr... 212 1e-54
AY935242-1|AAX14045.1| 164|Homo sapiens dUTP pyrophosphatase pr... 212 1e-54
AF018432-2|AAB71394.1| 164|Homo sapiens dUTPase protein. 212 1e-54
AF018432-1|AAB71393.1| 252|Homo sapiens dUTPase protein. 212 1e-54
AB049113-1|BAB13724.1| 164|Homo sapiens dUTP pyrophosphatase pr... 212 1e-54
AF090907-1|AAF24030.1| 73|Homo sapiens PRO0245 protein. 75 4e-13
DQ058014-1|AAY87452.1| 273|Homo sapiens protease protein. 48 4e-05
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 48 5e-05
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 47 6e-05
AK074181-1|BAB85007.1| 225|Homo sapiens FLJ00254 protein protein. 46 1e-04
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 45 3e-04
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 44 6e-04
AF074086-6|AAD21096.1| 333|Homo sapiens protease protein. 44 6e-04
AF074086-2|AAF88166.1| 333|Homo sapiens protease protein. 44 6e-04
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 43 0.001
AK131011-1|BAC85476.1| 134|Homo sapiens protein ( Homo sapiens ... 40 0.007
U90224-2|AAB93867.1| 51|Homo sapiens deoxyuridine triphosphate... 36 0.20
U90224-1|AAB93866.1| 139|Homo sapiens deoxyuridine triphosphate... 36 0.20
>U90223-1|AAB94642.1| 252|Homo sapiens deoxyuridine triphosphate
nucleotidohydrolase precursor protein.
Length = 252
Score = 212 bits (518), Expect = 1e-54
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 173
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV
Sbjct: 174 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 233
Query: 240 ANLSVTQRGDGGFGSTGK 187
L T+RG GGFGSTGK
Sbjct: 234 QALDDTERGSGGFGSTGK 251
>U62891-1|AAC51123.1| 164|Homo sapiens deoxyuridine triphosphatase
protein.
Length = 164
Score = 212 bits (518), Expect = 1e-54
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 240 ANLSVTQRGDGGFGSTGK 187
L T+RG GGFGSTGK
Sbjct: 146 QALDDTERGSGGFGSTGK 163
>U31930-1|AAC50418.1| 164|Homo sapiens deoxyuridine
nucleotidohydrolase protein.
Length = 164
Score = 212 bits (518), Expect = 1e-54
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 240 ANLSVTQRGDGGFGSTGK 187
L T+RG GGFGSTGK
Sbjct: 146 QALDDTERGSGGFGSTGK 163
>M89913-1|AAA58444.1| 141|Homo sapiens dUTP pyrophosphatase
protein.
Length = 141
Score = 212 bits (518), Expect = 1e-54
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 3 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 62
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV
Sbjct: 63 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 122
Query: 240 ANLSVTQRGDGGFGSTGK 187
L T+RG GGFGSTGK
Sbjct: 123 QALDDTERGSGGFGSTGK 140
>L11877-1|AAA36801.1| 141|Homo sapiens dUTP nucleotidohydrolase
protein.
Length = 141
Score = 212 bits (518), Expect = 1e-54
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 3 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 62
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV
Sbjct: 63 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 122
Query: 240 ANLSVTQRGDGGFGSTGK 187
L T+RG GGFGSTGK
Sbjct: 123 QALDDTERGSGGFGSTGK 140
>CR541781-1|CAG46580.1| 164|Homo sapiens DUT protein.
Length = 164
Score = 212 bits (518), Expect = 1e-54
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 240 ANLSVTQRGDGGFGSTGK 187
L T+RG GGFGSTGK
Sbjct: 146 QALDDTERGSGGFGSTGK 163
>CR541720-1|CAG46521.1| 164|Homo sapiens DUT protein.
Length = 164
Score = 212 bits (518), Expect = 1e-54
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 240 ANLSVTQRGDGGFGSTGK 187
L T+RG GGFGSTGK
Sbjct: 146 QALDDTERGSGGFGSTGK 163
>BC110377-1|AAI10378.1| 252|Homo sapiens dUTP pyrophosphatase
protein.
Length = 252
Score = 212 bits (518), Expect = 1e-54
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 173
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV
Sbjct: 174 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 233
Query: 240 ANLSVTQRGDGGFGSTGK 187
L T+RG GGFGSTGK
Sbjct: 234 QALDDTERGSGGFGSTGK 251
>BC070339-1|AAH70339.1| 252|Homo sapiens dUTP pyrophosphatase
protein.
Length = 252
Score = 212 bits (518), Expect = 1e-54
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 173
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV
Sbjct: 174 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 233
Query: 240 ANLSVTQRGDGGFGSTGK 187
L T+RG GGFGSTGK
Sbjct: 234 QALDDTERGSGGFGSTGK 251
>BC033645-1|AAH33645.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 212 bits (518), Expect = 1e-54
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 240 ANLSVTQRGDGGFGSTGK 187
L T+RG GGFGSTGK
Sbjct: 146 QALDDTERGSGGFGSTGK 163
>AY935242-1|AAX14045.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 212 bits (518), Expect = 1e-54
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 240 ANLSVTQRGDGGFGSTGK 187
L T+RG GGFGSTGK
Sbjct: 146 QALDDTERGSGGFGSTGK 163
>AF018432-2|AAB71394.1| 164|Homo sapiens dUTPase protein.
Length = 164
Score = 212 bits (518), Expect = 1e-54
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 240 ANLSVTQRGDGGFGSTGK 187
L T+RG GGFGSTGK
Sbjct: 146 QALDDTERGSGGFGSTGK 163
>AF018432-1|AAB71393.1| 252|Homo sapiens dUTPase protein.
Length = 252
Score = 212 bits (518), Expect = 1e-54
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 173
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV
Sbjct: 174 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 233
Query: 240 ANLSVTQRGDGGFGSTGK 187
L T+RG GGFGSTGK
Sbjct: 234 QALDDTERGSGGFGSTGK 251
>AB049113-1|BAB13724.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 212 bits (518), Expect = 1e-54
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 240 ANLSVTQRGDGGFGSTGK 187
L T+RG GGFGSTGK
Sbjct: 146 QALDDTERGSGGFGSTGK 163
>AF090907-1|AAF24030.1| 73|Homo sapiens PRO0245 protein.
Length = 73
Score = 74.5 bits (175), Expect = 4e-13
Identities = 38/70 (54%), Positives = 44/70 (62%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
L+F SE A +GS +A G DL AYD T+P K L K D+QI LP GCY RVAP
Sbjct: 3 LRFAPFSEQATTLTQGSTQATGYDLNGAYDDTIPPMEKALGKMDIQIALPSGCYRRVAPW 62
Query: 420 SGLALKNFID 391
GLA K+FID
Sbjct: 63 FGLAAKHFID 72
>DQ058014-1|AAY87452.1| 273|Homo sapiens protease protein.
Length = 273
Score = 48.0 bits (109), Expect = 4e-05
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Frame = -2
Query: 543 AAGIDLMSAYDYTV-PARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 367
+A +DL + ++ P + + T + LP G + RS L LK + + GV+D
Sbjct: 3 SAAVDLCTIQAVSLLPGEPPQKIPTGVYGPLPERTVGLILGRSSLNLKG-VQIHTGVVDS 61
Query: 366 DYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRGDGGFGST 193
DY+G + +V+ S +S GDRIA+L+ +L + + + GGFGST
Sbjct: 62 DYKGEIQLVI--SSSIPWSASPGDRIAELL-------LLPYIKGGNSEIKRTGGFGST 110
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 47.6 bits (108), Expect = 5e-05
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = -2
Query: 504 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHS 325
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKIPTGVYGPLPEGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 324 DTDFSVKKGDRIAQLI 277
+S GDRIAQL+
Sbjct: 735 SVPWSASPGDRIAQLL 750
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 47.2 bits (107), Expect = 6e-05
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = -2
Query: 504 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHS 325
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKIPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 324 DTDFSVKKGDRIAQLI 277
+S GDRIAQL+
Sbjct: 735 SIPWSASPGDRIAQLL 750
>AK074181-1|BAB85007.1| 225|Homo sapiens FLJ00254 protein protein.
Length = 225
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/94 (27%), Positives = 51/94 (54%)
Frame = -2
Query: 564 PVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVG 385
P+ + ++AG++++ +P G + + ++ LP G +G + P S A K + V
Sbjct: 76 PLPATLRSAGLEVLVPEGGMLPP-GDTTISLNWKLRLPTGHFGLLLPLSQQAKKG-VAVL 133
Query: 384 AGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQ 283
AGVID DY+ + ++L N S +++ GD + +
Sbjct: 134 AGVIDLDYQDEISLLLHNRSKKEYAWNTGDPLGR 167
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 44.8 bits (101), Expect = 3e-04
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = -2
Query: 504 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHS 325
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKIPTGVYGPLPEGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 324 DTDFSVKKGDRIAQLI 277
+S GDR AQL+
Sbjct: 735 SIPWSASPGDRSAQLL 750
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 44.0 bits (99), Expect = 6e-04
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = -2
Query: 504 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHS 325
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKIPTGVYGPLPEGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 324 DTDFSVKKGDRIAQLI 277
+S DRIAQL+
Sbjct: 735 SIPWSASPRDRIAQLL 750
>AF074086-6|AAD21096.1| 333|Homo sapiens protease protein.
Length = 333
Score = 44.0 bits (99), Expect = 6e-04
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -2
Query: 543 AAGIDLMSAYDYTV-PARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 367
+A +DL + ++ P + T + LP G G + RS L LK + + V+D
Sbjct: 62 SAAVDLCTIQAVSLLPGEPPQKTPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDS 120
Query: 366 DYRGNVGVVLFNHSDTDFSVKKGDRIAQLI 277
DY+G + +V+ S +S DRIAQL+
Sbjct: 121 DYKGEIQLVI--SSSIPWSASPRDRIAQLL 148
>AF074086-2|AAF88166.1| 333|Homo sapiens protease protein.
Length = 333
Score = 44.0 bits (99), Expect = 6e-04
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -2
Query: 543 AAGIDLMSAYDYTV-PARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 367
+A +DL + ++ P + T + LP G G + RS L LK + + V+D
Sbjct: 62 SAAVDLCTIQAVSLLPGEPPQKTPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDS 120
Query: 366 DYRGNVGVVLFNHSDTDFSVKKGDRIAQLI 277
DY+G + +V+ S +S DRIAQL+
Sbjct: 121 DYKGEIQLVI--SSSIPWSASPRDRIAQLL 148
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = -2
Query: 504 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHS 325
+P + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKTPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 324 DTDFSVKKGDRIAQLI 277
+S DRIAQL+
Sbjct: 735 SIPWSASPRDRIAQLL 750
>AK131011-1|BAC85476.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ27501 fis, clone TST06374. ).
Length = 134
Score = 40.3 bits (90), Expect = 0.007
Identities = 31/117 (26%), Positives = 54/117 (46%)
Frame = -2
Query: 564 PVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVG 385
PV + +AG++++ +P + +L++ LPPG +G + P S A K + V
Sbjct: 14 PVPATLLSAGLEVLVPDGGRLPPGDTTTIPLNLKLRLPPGYFGLLLPLSQQAKKG-VTVL 72
Query: 384 AGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 214
AG+I DY + + L N D++ G + L + PV++ L T G
Sbjct: 73 AGMI--DYHDEISLPLHNGGKEDYAWNTGYPLGHL--SVLPCPVIKGNGKLQQTNPG 125
>U90224-2|AAB93867.1| 51|Homo sapiens deoxyuridine triphosphate
nucleotidohydrolase, nuclear isoform protein.
Length = 51
Score = 35.5 bits (78), Expect = 0.20
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDL 526
L+F RLSE+A P RGS +AAG DL
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDL 50
>U90224-1|AAB93866.1| 139|Homo sapiens deoxyuridine triphosphate
nucleotidohydrolase, mitochondrial isoform protein.
Length = 139
Score = 35.5 bits (78), Expect = 0.20
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDL 526
L+F RLSE+A P RGS +AAG DL
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDL 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,557,726
Number of Sequences: 237096
Number of extensions: 1638678
Number of successful extensions: 2285
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2283
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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