Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k09r
(745 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical pr... 182 3e-46
U96695-1|AAB57697.1| 491|Caenorhabditis elegans deoxyuridinetri... 182 3e-46
U00048-5|AAB53832.2| 621|Caenorhabditis elegans Hypothetical pr... 29 2.6
U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF078157-14|AAG24081.1| 348|Caenorhabditis elegans Serpentine r... 29 4.6
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 28 8.0
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 28 8.0
U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical
protein K07A1.2 protein.
Length = 491
Score = 182 bits (442), Expect = 3e-46
Identities = 91/138 (65%), Positives = 105/138 (76%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
++FT+L+ENA P GSE+AAG DL SA D TVPA GK V T +Q+ELP G YGRVAPR
Sbjct: 187 VRFTQLNENAQTPTYGSEEAAGADLYSAEDITVPAHGKCCVSTGIQMELPFGYYGRVAPR 246
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVID DYRG V V+LFN +D F VKKGDRIAQLICEKI + V +
Sbjct: 247 SGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFTDNAFEVKKGDRIAQLICEKIGHCVYEAA 306
Query: 240 ANLSVTQRGDGGFGSTGK 187
+ L T RG GGFGSTG+
Sbjct: 307 SELENTDRGAGGFGSTGQ 324
Score = 176 bits (428), Expect = 2e-44
Identities = 86/138 (62%), Positives = 103/138 (74%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
++ T+ ++NA P GS +AAG DL SA D TVPARGK V T +Q+ LP G YGRVAPR
Sbjct: 350 IQITKSNDNAQMPTYGSAEAAGADLYSAEDVTVPARGKLCVSTGIQMALPIGYYGRVAPR 409
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVID DYRG V V+LFN + DF VKKGDRIAQL+CE+I +V
Sbjct: 410 SGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFGENDFEVKKGDRIAQLVCEQIALCTYSKV 469
Query: 240 ANLSVTQRGDGGFGSTGK 187
+L VT+RG GGFGSTG+
Sbjct: 470 ESLEVTERGAGGFGSTGQ 487
Score = 166 bits (403), Expect = 2e-41
Identities = 85/138 (61%), Positives = 99/138 (71%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
++FT + +A +P GS +AG DL SA D VPA GK V T LQIELP G YGRVAPR
Sbjct: 31 IRFTEMVGDAQKPTYGSISSAGADLYSAEDVVVPANGKLCVSTGLQIELPIGYYGRVAPR 90
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVID DYRG V V+LFN + T F VK GDRIA+LICE+I +EV
Sbjct: 91 SGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFNTTAFEVKTGDRIAKLICEQIGNGTYEEV 150
Query: 240 ANLSVTQRGDGGFGSTGK 187
+L T RG GGFGSTG+
Sbjct: 151 KSLPSTNRGAGGFGSTGE 168
>U96695-1|AAB57697.1| 491|Caenorhabditis elegans
deoxyuridinetriphosphatase protein.
Length = 491
Score = 182 bits (442), Expect = 3e-46
Identities = 91/138 (65%), Positives = 105/138 (76%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
++FT+L+ENA P GSE+AAG DL SA D TVPA GK V T +Q+ELP G YGRVAPR
Sbjct: 187 VRFTQLNENAQTPTYGSEEAAGADLYSAEDITVPAHGKCCVSTGIQMELPFGYYGRVAPR 246
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVID DYRG V V+LFN +D F VKKGDRIAQLICEKI + V +
Sbjct: 247 SGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFTDNAFEVKKGDRIAQLICEKIGHCVYEAA 306
Query: 240 ANLSVTQRGDGGFGSTGK 187
+ L T RG GGFGSTG+
Sbjct: 307 SELENTDRGAGGFGSTGQ 324
Score = 176 bits (428), Expect = 2e-44
Identities = 86/138 (62%), Positives = 103/138 (74%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
++ T+ ++NA P GS +AAG DL SA D TVPARGK V T +Q+ LP G YGRVAPR
Sbjct: 350 IQITKSNDNAQMPTYGSAEAAGADLYSAEDVTVPARGKLCVSTGIQMALPIGYYGRVAPR 409
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVID DYRG V V+LFN + DF VKKGDRIAQL+CE+I +V
Sbjct: 410 SGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFGENDFEVKKGDRIAQLVCEQIALCTYSKV 469
Query: 240 ANLSVTQRGDGGFGSTGK 187
+L VT+RG GGFGSTG+
Sbjct: 470 ESLEVTERGAGGFGSTGQ 487
Score = 166 bits (403), Expect = 2e-41
Identities = 85/138 (61%), Positives = 99/138 (71%)
Frame = -2
Query: 600 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 421
++FT + +A +P GS +AG DL SA D VPA GK V T LQIELP G YGRVAPR
Sbjct: 31 IRFTEMVGDAQKPTYGSISSAGADLYSAEDVVVPANGKLCVSTGLQIELPIGYYGRVAPR 90
Query: 420 SGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEV 241
SGLA K+FIDVGAGVID DYRG V V+LFN + T F VK GDRIA+LICE+I +EV
Sbjct: 91 SGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFNTTAFEVKTGDRIAKLICEQIGNGTYEEV 150
Query: 240 ANLSVTQRGDGGFGSTGK 187
+L T RG GGFGSTG+
Sbjct: 151 KSLPSTNRGAGGFGSTGE 168
>U00048-5|AAB53832.2| 621|Caenorhabditis elegans Hypothetical
protein C05D11.7a protein.
Length = 621
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -2
Query: 483 LVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVV 340
+V+ +L++ LPP Y R ++L + D +IDE YR N ++
Sbjct: 94 IVRDELEVILPPNAYEMCTGRLVISLTRWSDHENVIIDE-YRSNADLI 140
>U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical
protein C05D11.7b protein.
Length = 751
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -2
Query: 483 LVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVV 340
+V+ +L++ LPP Y R ++L + D +IDE YR N ++
Sbjct: 94 IVRDELEVILPPNAYEMCTGRLVISLTRWSDHENVIIDE-YRSNADLI 140
>AF078157-14|AAG24081.1| 348|Caenorhabditis elegans Serpentine
receptor, class h protein92 protein.
Length = 348
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -2
Query: 168 IKKYFNF-VHIFFIYSISNL*TYVNFNFLKVYEKQSKLIFRNIFNFS 31
+ +F F + I FI I+ L ++N + + +YE +S LI +N F +
Sbjct: 100 VLNFFRFPILISFILGINTL-IFMNLSLIYLYESRSSLIVKNKFKIT 145
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = -2
Query: 552 SEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVI 373
SE+ D+ + VP + + Q ELP GR + G N +DV G+
Sbjct: 265 SEEKTSNDVQKNLETDVPPGIRSAIDAAAQEELPVRRQGRRSANFGYGNGNELDVALGMQ 324
Query: 372 DED 364
D D
Sbjct: 325 DND 327
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = -2
Query: 552 SEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVI 373
SE+ D+ + VP + + Q ELP GR + G N +DV G+
Sbjct: 265 SEEKTSNDVQKNLETDVPPGIRSAIDAAAQEELPVRRQGRRSANFGYGNGNELDVALGMQ 324
Query: 372 DED 364
D D
Sbjct: 325 DND 327
>U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical
protein F18C5.3 protein.
Length = 1490
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 26 MQLKLKMFLKISLDCFSYTFKKL 94
M +L F+KI LDCF + ++KL
Sbjct: 894 MVSRLNPFVKIILDCFDFKYEKL 916
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,483,897
Number of Sequences: 27780
Number of extensions: 293430
Number of successful extensions: 691
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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