Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k04r
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    28   0.070
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          28   0.093
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           28   0.093
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   2.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   6.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   6.1  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   8.1  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 28.3 bits (60), Expect = 0.070
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 115 NIFEVCKINVMFHVSHIHNH*INDVVKPSFKYK 213
           NIF+      MFHV+  HN  IN VV PS  ++
Sbjct: 182 NIFDQVGSLGMFHVNMSHNKLINLVVAPSVPFE 214


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 27.9 bits (59), Expect = 0.093
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 744 VDASSSAADIKRAVDKFLTYKPVDQTANWVVGNHDNS 634
           V +++S+AD  + VD+ L++ P+D    W     DNS
Sbjct: 170 VASTASSAD-HQIVDRLLSHAPIDSANQWYSQTIDNS 205


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 27.9 bits (59), Expect = 0.093
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 744 VDASSSAADIKRAVDKFLTYKPVDQTANWVVGNHDNS 634
           V +++S+AD  + VD+ L++ P+D    W     DNS
Sbjct: 161 VASTASSAD-HQIVDRLLSHAPIDSANQWYSQTIDNS 196


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/42 (21%), Positives = 20/42 (47%)
 Frame = +1

Query: 418 MERSPFGISRRFDIFYWVVGITSRWVNCVFPANIAVFQSNFF 543
           +E   + + + F +F + V   S W+  +   N++    NF+
Sbjct: 25  VENPTYRLYKIFVVFSFAVTFFSAWICALVNYNVSEISENFY 66


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -3

Query: 417 WNPEKNAGFSTADKTWLPMAEGYETLNVEVQKASER--SHLKVYKALSD 277
           WNP+      T  +TW+P+   +   N+  Q    R  + + ++  L+D
Sbjct: 489 WNPKDCDPLITLIETWMPLLPQWILDNIYDQLIMPRIQAEVNIWNPLTD 537


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 646 SRQ*PNGYKIWCFIGRWYQH 587
           S++  +GYK+ C+   W Q+
Sbjct: 80  SKKDKDGYKVVCYYTNWSQY 99


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 224 IRIFLYLKDGLTTSFI*WL*ICETWNITLILHTSKMF 114
           + + LY+   L T F+ ++ ICE   +TL  +T  +F
Sbjct: 141 VYVILYI---LATVFLAYVWICEMGVVTLQAYTLHLF 174


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 224 IRIFLYLKDGLTTSFI*WL*ICETWNITLILHTSKMF 114
           + + LY+   L T F+ ++ ICE   +TL  +T  +F
Sbjct: 141 VYVILYI---LATVFLAYVWICEMGVVTLQAYTLHLF 174


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -3

Query: 576 LLPGVAVTYMGE 541
           ++PGVAV ++GE
Sbjct: 75  VIPGVAVDFLGE 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,093
Number of Sequences: 336
Number of extensions: 4132
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)