Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k04r
         (758 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...   184   8e-49
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.   181   6e-48
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...   181   7e-48
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...   122   5e-30
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   1.8  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   3.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   3.1  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase protein.
          Length = 580

 Score =  184 bits (448), Expect = 8e-49
 Identities = 92/248 (37%), Positives = 141/248 (56%)
 Frame = -3

Query: 753  ITDVDASSSAADIKRAVDKFLTYKPVDQTANWVVGNHDNSRMATRYGASLVDGINMLVLL 574
            I D++  S+A+D K+ +D+++   P     NWV GNHDN R+A+R+G    D I ML L 
Sbjct: 317  IADLNNQSTASDFKQLIDRWVANVPNGSVTNWVSGNHDNHRVASRFGRQRGDEIVMLTLT 376

Query: 573  LPGVAVTYMGEEIGLEDGYVSWEDTVDPSGCNTNDPIKYVESSRDPERTPFHWNPEKNAG 394
            LPG+ V Y G+EIG+ED + ++++TVDP+GCN   P KY   SRDPERTP+ W+   +AG
Sbjct: 377  LPGIGVVYNGDEIGMEDRWFTYQETVDPAGCNAG-PAKYYLKSRDPERTPYQWDNSTSAG 435

Query: 393  FSTADKTWLPMAEGYETLNVEVQKASERSHLKVYKALSDLRQENTFRYGRYESLALNQDI 214
            FS  +KTWLP+ E Y++LN+  QK    SH   +K+LS L+++     G  E   ++  +
Sbjct: 436  FSQTNKTWLPVNENYKSLNLAAQKREYYSHYVAFKSLSYLKKQPVIANGSLEVDVIDGRV 495

Query: 213  FVFKRWLNDVIYLVVVNMRDVEHNIDLTYFENVSGNVAVSIRSVNSPKNEGDTFDAKSLP 34
               KR L +   +V++N       ++LT     +  V  +   V S  + G+     S+ 
Sbjct: 496  LSVKRELGNDTVIVMMNFSKNPVTVNLTKLHPPADLVVYACNVVGSGLSHGNWIYPASMT 555

Query: 33   VVGFEGLV 10
            + G    V
Sbjct: 556  IPGSNSAV 563


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score =  181 bits (441), Expect = 6e-48
 Identities = 89/245 (36%), Positives = 132/245 (53%), Gaps = 1/245 (0%)
 Frame = -3

Query: 753  ITDVDASSSAADIKRAVDKFLTYKPVDQTANWVVGNHDNSRMATRYGASLVDGINMLVLL 574
            I +V   S+++D K+ VD ++TY P     NWV GNHD  R+ +R+G      I  + LL
Sbjct: 311  IKNVSRDSNSSDFKKLVDNWMTYMPPSGIPNWVPGNHDQLRLVSRFGEEKARMITTMSLL 370

Query: 573  LPGVAVTYMGEEIGLEDGYVSWEDTVDPSGCNTNDPIKYVESSRDPERTPFHWNPEKNAG 394
            LPGVAV Y G+EIG+ D Y+SWEDT DP GC       Y   SRDP RTPF W+   +AG
Sbjct: 371  LPGVAVNYYGDEIGMSDTYISWEDTQDPQGCGAGKE-NYQTMSRDPARTPFQWDDSVSAG 429

Query: 393  FSTADKTWLPMAEGYETLNVEVQKASERSHLKVYKALSDLRQENTFRYGRYESLALNQDI 214
            FS++  TWL + E Y+T+N+  +K  + S   ++K  + L++   F+     +  LN ++
Sbjct: 430  FSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKEANLNTRMLNDNV 489

Query: 213  FVFKRWLNDVIYL-VVVNMRDVEHNIDLTYFENVSGNVAVSIRSVNSPKNEGDTFDAKSL 37
            F F R   D   L  ++N  + E  +DL  F NV   + +   + NS        +   +
Sbjct: 490  FAFSRETEDNGSLYAILNFSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISNNEQVKV 549

Query: 36   PVVGF 22
              +GF
Sbjct: 550  SALGF 554


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score =  181 bits (440), Expect = 7e-48
 Identities = 88/245 (35%), Positives = 132/245 (53%), Gaps = 1/245 (0%)
 Frame = -3

Query: 753  ITDVDASSSAADIKRAVDKFLTYKPVDQTANWVVGNHDNSRMATRYGASLVDGINMLVLL 574
            I +V   S+++D K+ +D ++TY P     NWV GNHD  R+ +R+G      I  + LL
Sbjct: 311  IKNVSRDSNSSDFKKLIDNWMTYMPPSGIPNWVPGNHDQLRLVSRFGEEKARMITTMSLL 370

Query: 573  LPGVAVTYMGEEIGLEDGYVSWEDTVDPSGCNTNDPIKYVESSRDPERTPFHWNPEKNAG 394
            LPGVAV Y G+EIG+ D Y+SWEDT DP GC       Y   SRDP RTPF W+   +AG
Sbjct: 371  LPGVAVNYYGDEIGMSDTYISWEDTQDPQGCGAGKE-NYQTMSRDPARTPFQWDDSVSAG 429

Query: 393  FSTADKTWLPMAEGYETLNVEVQKASERSHLKVYKALSDLRQENTFRYGRYESLALNQDI 214
            FS++  TWL + E Y+T+N+  +K  + S   ++K  + L++   F+     +  LN ++
Sbjct: 430  FSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKEANLNTRMLNDNV 489

Query: 213  FVFKRWLNDVIYL-VVVNMRDVEHNIDLTYFENVSGNVAVSIRSVNSPKNEGDTFDAKSL 37
            F F R   D   L  ++N  + E  +DL  F NV   + +   + NS        +   +
Sbjct: 490  FAFSRETEDNGSLYAILNFSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISNNEQVKV 549

Query: 36   PVVGF 22
              +GF
Sbjct: 550  SALGF 554


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase protein.
          Length = 588

 Score =  122 bits (293), Expect = 5e-30
 Identities = 80/254 (31%), Positives = 122/254 (48%), Gaps = 6/254 (2%)
 Frame = -3

Query: 753  ITDVDASSSAADIKRAVDKFLTYKPVDQTANWVVGNHDNSRMATRYGASLVDGINMLVLL 574
            ITD ++SS+    K  +D ++   P +   NWV+GNHD  R+ TRY     D + ML ++
Sbjct: 324  ITDANSSSTPEQFKVIIDNWIKGTPQNNVPNWVMGNHDRVRVGTRY-PGRADHMIMLEMI 382

Query: 573  LPGVAVTYMGEEIGLEDGYVSWEDTVDPSGCNTNDPIKYVESSRDPERTPFHWNPEKNAG 394
            LPGVAVTY GEEIG+ D              NT     Y    RD  RTPF W+   NAG
Sbjct: 383  LPGVAVTYYGEEIGMVD--------------NTT---IYKYDVRDGCRTPFQWDNSINAG 425

Query: 393  FS-----TADKTWLPMAEGYET-LNVEVQKASERSHLKVYKALSDLRQENTFRYGRYESL 232
            FS       +K WLP+   Y++ LN+E +K    SH  +Y  L+ LR+ +  + G +   
Sbjct: 426  FSKIAENLLEKNWLPVHTSYKSGLNLEQEKKDSISHYHLYTNLTALRKRDVLKKGNFTIE 485

Query: 231  ALNQDIFVFKRWLNDVIYLVVVNMRDVEHNIDLTYFENVSGNVAVSIRSVNSPKNEGDTF 52
             LN+ +    R   +    +++N       +D++   N   N  +   SVNS      T 
Sbjct: 486  ILNKTVLAVVRQSEEEAVSLLINFSKNNTIVDISKLVNKRNNAKIYTSSVNSNLTVNQTV 545

Query: 51   DAKSLPVVGFEGLV 10
            +  ++ + G   ++
Sbjct: 546  NPVAINIPGDTSII 559


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +2

Query: 377 LSAVENPAFFSGFQWKGVLSGSLD 448
           +S ++   +F GF W+G+ + +L+
Sbjct: 617 ISEIQKHKWFDGFNWEGLRARTLE 640


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 370 PGLVSGRESSVFLGVPMERSPFG 438
           P  V  +E  VF G+P  + P G
Sbjct: 51  PRTVLDKEVHVFYGIPFAKPPIG 73


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 370 PGLVSGRESSVFLGVPMERSPFG 438
           P  V  +E  VF G+P  + P G
Sbjct: 51  PRTVLDKEVHVFYGIPFAKPPIG 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,848
Number of Sequences: 438
Number of extensions: 4986
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)