Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k04f
(603 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 25 0.65
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 25 0.65
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 25 0.65
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 23 2.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 4.6
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 21 6.1
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 21 6.1
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 8.0
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 21 8.0
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 21 8.0
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 24.6 bits (51), Expect = 0.65
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 375 SSIEKGE*IRHQSCFGSCTKSYIKRKCLVPRSSQWQRKILQLFRLGRRNHRRKW 536
S++E SC GS T S + CL + + K QL L + H K+
Sbjct: 226 SALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNK--QLTELEKEFHFNKY 277
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 24.6 bits (51), Expect = 0.65
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 375 SSIEKGE*IRHQSCFGSCTKSYIKRKCLVPRSSQWQRKILQLFRLGRRNHRRKW 536
S++E SC GS T S + CL + + K QL L + H K+
Sbjct: 15 SALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNK--QLTELEKEFHFNKY 66
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 24.6 bits (51), Expect = 0.65
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 375 SSIEKGE*IRHQSCFGSCTKSYIKRKCLVPRSSQWQRKILQLFRLGRRNHRRKW 536
S++E SC GS T S + CL + + K QL L + H K+
Sbjct: 15 SALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNK--QLTELEKEFHFNKY 66
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 23.0 bits (47), Expect = 2.0
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 375 SSIEKGE*IRHQSCFGSCTKSYIKRKCL 458
S++E + SC GS T S + CL
Sbjct: 226 SALESPDPASRSSCLGSNTSSMLSLNCL 253
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 166 QIYPRSFADSDGDGIGDLNGITSKLEYIKELGVGA--VW 276
+I P ++ D+ I K E+IK +G+G +W
Sbjct: 2125 RIGPYAYLRDQWVSFDDIGMIRHKSEFIKAMGLGGGMIW 2163
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 21.4 bits (43), Expect = 6.1
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +1
Query: 361 MEDFEALLKKANELDIKVVLDLVPNH 438
M ++ + + ++ VVLD++P H
Sbjct: 1 MHFYDKMFNQEQNNNVPVVLDVIPPH 26
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 21.4 bits (43), Expect = 6.1
Identities = 20/97 (20%), Positives = 42/97 (43%)
Frame = +2
Query: 224 VLLQNWNISKN*V*ELFGFRRFSNRPWLILATTLLIFMKSTMNMVRWKISKLY*KRRMN* 403
VL++ WNI + + + P +++ T L+ FM ++ ++ + +RR
Sbjct: 435 VLMEMWNIPRENIDPI---------PLVVVLTHLIPFMLIHQGETQFVVANIILRRRFAL 485
Query: 404 TSKLFWILYQIIHQTKVFGSKKLSMATKNITIISFGK 514
+ + LY+ ++ + KK +I I S K
Sbjct: 486 INSILRKLYKNKYRKLIVDGKKSEEQIVDICIRSHDK 522
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 8.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 566 LNQLFGGCLFPFSSMIPSSQTK 501
+NQ GG + FS+ +P +T+
Sbjct: 1272 VNQQIGGIVTYFSTNLPKRETE 1293
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 21.0 bits (42), Expect = 8.0
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = -3
Query: 370 NLPSYHIHGGFHKN*QCRSQNQPW 299
N P + + G+H+ Q + Q W
Sbjct: 22 NAPMHSWYAGYHQGAQMGPEQQMW 45
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 21.0 bits (42), Expect = 8.0
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = -3
Query: 370 NLPSYHIHGGFHKN*QCRSQNQPW 299
N P + + G+H+ Q + Q W
Sbjct: 22 NAPMHSWYAGYHQGAQMGPEQQMW 45
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,426
Number of Sequences: 336
Number of extensions: 3593
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -