Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k04f
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical pr... 88 5e-18
Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical pr... 84 6e-17
Z35663-6|CAD82917.1| 606|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z30215-4|CAA82936.1| 541|Caenorhabditis elegans Hypothetical pr... 35 0.051
Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical pr... 31 0.48
Z81533-13|CAB04336.2| 323|Caenorhabditis elegans Hypothetical p... 31 0.84
Z83120-5|CAB05588.1| 1467|Caenorhabditis elegans Hypothetical pr... 30 1.1
U41021-7|AAL02487.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.1
U41021-6|AAL02488.1| 713|Caenorhabditis elegans Hypothetical pr... 30 1.1
U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical ... 29 2.6
Z83216-12|CAB05675.2| 323|Caenorhabditis elegans Hypothetical p... 28 4.5
Z81500-8|CAM84816.1| 284|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81585-2|CAB04682.2| 303|Caenorhabditis elegans Hypothetical pr... 28 5.9
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 27 7.8
>Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical
protein C38C6.2 protein.
Length = 647
Score = 87.8 bits (208), Expect = 5e-18
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Frame = +1
Query: 139 DWWETSILYQIYPRSFADSDGDGIGDLNGITSKLEYIKELGVGAVWLSPIFKSPMVDFGY 318
+WW+T++ Y ++ SF DSDGDG+GD++G+ ++L+ +++ GV VW SP S D
Sbjct: 132 NWWQTAVAYHVWVPSFQDSDGDGVGDVDGLINRLDQLRKSGVQTVWPSPFLISD--DEKT 189
Query: 319 DIANFYEIHHEYGTMEDFEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNG----NE 486
+ +F ++ + G + + L+ K +E ++ +V+ TS E WF + N
Sbjct: 190 AVRSFSQMDPKIGVNQKADELINKIHEKEMNIVISFPIATTSLEHEWFLNSATASKTPNA 249
Query: 487 KYYNYFVWEDGIIDENGNRQPPNNWLSHFRGS 582
Y ++ W D N + N + H +G+
Sbjct: 250 NYSQFYTWVSKAADSNFFTEHKNLFYLHEKGN 281
>Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical
protein F26D10.9a protein.
Length = 613
Score = 84.2 bits (199), Expect = 6e-17
Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 7/133 (5%)
Frame = +1
Query: 88 LLFVACSGIII---KNGEVQ--DWWETSILYQIYPRSFADSDGDGIGDLNGITSKLEYIK 252
L+F I++ K E Q DWW+T + YQ+ +F DSD DG+GD GI+ K+++++
Sbjct: 75 LMFAGAIAIVVLSPKCAEKQKPDWWQTKVSYQLLTATFYDSDNDGVGDFAGISQKIDFLR 134
Query: 253 ELGVGAVWLSPIFKSPMVDF--GYDIANFYEIHHEYGTMEDFEALLKKANELDIKVVLDL 426
++GV V+ +P+ K ++ YD+ + + +GT E F+ L+ + + +V+DL
Sbjct: 135 KIGVTTVYPTPVIKIHKDEYFNSYDVVDHNSVDERFGTEEQFKELIDTVHNRAMYLVMDL 194
Query: 427 VPNHTSNESVWFQ 465
+ WF+
Sbjct: 195 PVSTIDLSHPWFE 207
>Z35663-6|CAD82917.1| 606|Caenorhabditis elegans Hypothetical
protein T04A8.7b protein.
Length = 606
Score = 47.2 bits (107), Expect = 9e-06
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 238 LEYIKELGVGAVWLSPIFKSPM-VDFGYDIANFYEIHHEYGTMEDFEALLKKANELDIKV 414
L I++ G A+ L + + FGY ++NF+ + GT ED + L+ KA+ L I +
Sbjct: 130 LPRIQKQGYNAIQLMAVMEHVYYASFGYQVSNFFAVSSRCGTPEDLKYLVDKAHSLGIFM 189
Query: 415 VLDLVPNHTS 444
+LD+V +H S
Sbjct: 190 LLDVVHSHAS 199
>Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical
protein T04A8.7a protein.
Length = 681
Score = 47.2 bits (107), Expect = 9e-06
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 238 LEYIKELGVGAVWLSPIFKSPM-VDFGYDIANFYEIHHEYGTMEDFEALLKKANELDIKV 414
L I++ G A+ L + + FGY ++NF+ + GT ED + L+ KA+ L I +
Sbjct: 205 LPRIQKQGYNAIQLMAVMEHVYYASFGYQVSNFFAVSSRCGTPEDLKYLVDKAHSLGIFM 264
Query: 415 VLDLVPNHTS 444
+LD+V +H S
Sbjct: 265 LLDVVHSHAS 274
>Z30215-4|CAA82936.1| 541|Caenorhabditis elegans Hypothetical
protein F40F12.4 protein.
Length = 541
Score = 34.7 bits (76), Expect = 0.051
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +1
Query: 370 FEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNGNEKYYNYFVWE 513
F+A++K+ N+ +I VV + P T N WF+E+LN + Y+Y +E
Sbjct: 466 FQAIVKRENKEEI-VVFE-APKLTRNSRRWFRESLNISAGKYDYIAFE 511
>Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical
protein C50B6.7 protein.
Length = 713
Score = 31.5 bits (68), Expect = 0.48
Identities = 8/35 (22%), Positives = 24/35 (68%)
Frame = +1
Query: 334 YEIHHEYGTMEDFEALLKKANELDIKVVLDLVPNH 438
Y++ G ++F+ ++ + N++ +++++D+V NH
Sbjct: 89 YKLDSRSGNEQEFQDMVNRCNKVGVRIIVDIVMNH 123
>Z81533-13|CAB04336.2| 323|Caenorhabditis elegans Hypothetical
protein F36G9.6 protein.
Length = 323
Score = 30.7 bits (66), Expect = 0.84
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 594 VFPSAASKVTQPIIRWLPISIFVYDSVF 511
+FPS K+ I+RWLP+ IF+Y +F
Sbjct: 138 IFPSDFQKINIKILRWLPL-IFLYPILF 164
>Z83120-5|CAB05588.1| 1467|Caenorhabditis elegans Hypothetical
protein R06A4.8 protein.
Length = 1467
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Frame = +1
Query: 208 IGDLNGITSKLEYIKELGVGAVWLSPIFKSPMVDFGYDIANFYEI-------HHEYGTME 366
+G L+ +LE + G + L+PI + + + Y +++ + + ++G E
Sbjct: 124 LGPLSEWKERLEVAHQTGYNMIHLTPIHELGISNSSYSLSDHHSLIKTIQSQDQKFG-FE 182
Query: 367 DFEALLKKANEL-DIKVVLDLVPNHTSNESVWFQE 468
D +AL+ +I V D+V NH + + W E
Sbjct: 183 DVQALVGDLERSWNILTVQDVVWNHAAKNATWLLE 217
>U41021-7|AAL02487.1| 680|Caenorhabditis elegans Hypothetical
protein F14D12.1a protein.
Length = 680
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +1
Query: 358 TMEDFEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNGNEKY 492
++E F LLKKANE D + L L H E VW Q N K+
Sbjct: 79 SIEMFSRLLKKANEDDGSLNLYLNKKHA--EGVWLQNIGNRTRKH 121
>U41021-6|AAL02488.1| 713|Caenorhabditis elegans Hypothetical
protein F14D12.1b protein.
Length = 713
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +1
Query: 358 TMEDFEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNGNEKY 492
++E F LLKKANE D + L L H E VW Q N K+
Sbjct: 79 SIEMFSRLLKKANEDDGSLNLYLNKKHA--EGVWLQNIGNRTRKH 121
>U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical
protein B0507.3 protein.
Length = 432
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -2
Query: 314 PKSTMGDLKIGESQTAPTPNSLIYSNFEVIPFKSPIPSPSLSAKD 180
P G LK+ + AP P I S + I KSP P+PSL A +
Sbjct: 149 PTLVTGPLKVAPASLAPVPME-IQSQEQPIK-KSPAPTPSLDASN 191
>AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical
protein C48E7.8 protein.
Length = 820
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 434 FGTRSKTTLMSNSFAFFNRASKSSIVPYSWWIS 336
FGT T + FAF + S+ VP+ W+IS
Sbjct: 458 FGTECNVTTIWPHFAFVSNFFPSTCVPWLWYIS 490
>Z83216-12|CAB05675.2| 323|Caenorhabditis elegans Hypothetical
protein C08F11.4 protein.
Length = 323
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 594 VFPSAASKVTQPIIRWLPISIFVYDSVF 511
+FPS K+ I+ WLP+ IF+Y F
Sbjct: 138 IFPSNYQKINARILDWLPL-IFIYPFFF 164
>Z81500-8|CAM84816.1| 284|Caenorhabditis elegans Hypothetical
protein F11D11.14 protein.
Length = 284
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 439 TSNESVWFQEALNG-NEKYYNYFVWEDG 519
++ E W +EA+NG + + NY VW DG
Sbjct: 177 SAEECQWIREAVNGMSPPWNNYGVWIDG 204
>Z81585-2|CAB04682.2| 303|Caenorhabditis elegans Hypothetical
protein T05E12.2 protein.
Length = 303
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 585 SAASKVTQPIIRWLPISIFVYDSVFPNEIIVIFFVAIESFLEPNTFV*CMIWYKIQNN 412
S A V + + ++PI + Y +FP II I + I + FV C +I+ N
Sbjct: 105 SLAIAVERVVAAYIPIYFYKYRPIFPTFIIFILSICIGLNEDVFLFVFCEFSLQIRPN 162
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 441 IKRKCLVPRSSQWQRKILQLFRLGRRNHRRKWK 539
+KRK + R + + LQ++R RR H+RK+K
Sbjct: 533 LKRKLIRKRKRRRIQIKLQMYREQRREHKRKFK 565
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,684,646
Number of Sequences: 27780
Number of extensions: 329160
Number of successful extensions: 911
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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