Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k03r
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   1.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.7  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = -3

Query: 386 YIYRLLALKLYNFKTY*SVLNVEHNMIFFNINHLCNIYFIVFTSYII 246
           YI+  L++  Y    +  + + E N+I    N +C++Y+I+  + I+
Sbjct: 138 YIFTYLSVTCYVTYAWSPIDHTESNII----NDMCSLYYILQITLIV 180


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 14/55 (25%), Positives = 24/55 (43%)
 Frame = +2

Query: 533 LVYTDGFPASHPSLGPNEITPIKILELFQTTVKGPPESPSQGPRLPAPLVQDDYP 697
           L +    P S P+  P+E+  +K  +L    V        +GP+     V++D P
Sbjct: 64  LAWQANSPPSPPA--PSELPALKSRKLNNNNVVSSTNQEIRGPKRKTWKVEEDSP 116


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -2

Query: 573 NEGCEAGKPSVYTRVTAFLTW 511
           N+    G P  YT  T FL +
Sbjct: 289 NKEAGGGSPGPYTNATGFLAY 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,745
Number of Sequences: 336
Number of extensions: 3064
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)