Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k03f
(640 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 60 1e-09
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 59 3e-09
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 58 6e-09
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 56 3e-08
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 54 1e-07
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 52 4e-07
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 51 7e-07
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 50 1e-06
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 49 4e-06
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 48 6e-06
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 47 1e-05
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 45 5e-05
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 44 1e-04
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 43 2e-04
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 43 2e-04
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 41 7e-04
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 41 7e-04
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 41 0.001
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 40 0.001
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 38 0.005
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.005
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.009
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 37 0.012
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.012
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 36 0.037
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 36 0.037
SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06) 34 0.11
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 33 0.15
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 33 0.15
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.15
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 33 0.20
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.60
SB_30354| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 31 0.79
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 30 1.8
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 30 1.8
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_24732| Best HMM Match : Notch (HMM E-Value=0.21) 29 4.2
SB_55031| Best HMM Match : GRP (HMM E-Value=5.3) 29 4.2
SB_13781| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_16815| Best HMM Match : TIL (HMM E-Value=0.39) 28 5.6
SB_16814| Best HMM Match : HNF-1A_C (HMM E-Value=2.9) 28 5.6
SB_39908| Best HMM Match : Prismane (HMM E-Value=3) 28 7.4
SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 27 9.7
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 60.5 bits (140), Expect = 1e-09
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Frame = +2
Query: 167 RIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHC-WWDGQSQAKQF 343
RI+GG + A A P L A+ G CGG+L++ ++TAAHC ++DG+
Sbjct: 723 RIVGGRE-AKAGAWPW---LAAIYVKGSFR-CGGALIARDWVVTAAHCFYYDGKIVPSDI 777
Query: 344 TAVLG--STTIFTGGIR-IDTSAVTVHPNWNTNDYTHDIAVIRIT-SVAYSNNVQAIPLP 511
LG T+ G + + S + +HP N N D+A+I++ V + V+ + LP
Sbjct: 778 LVRLGEHDRTLEEGSEQNVRASNLVLHPLANKNGLDFDVALIQLKGGVKLTAYVRTVCLP 837
Query: 512 SASDVNRDFVGLTGTISGYGKTSGAQTSI---PLTSVLYQTSVPVI 640
+D G G ++G+G T S+ P VL Q +P +
Sbjct: 838 QPTDAILVRPGSVGIVAGWGSTQKGDASVRSGPPYPVLKQVQLPFV 883
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 59.3 bits (137), Expect = 3e-09
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Frame = +2
Query: 161 SSRIIGGSQVAAASVIPHHVGL--VALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQA 334
++RI+GG++ A P + + V T ICGGS+V+ I+TAAHC + A
Sbjct: 101 NTRIVGGTR-AKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHC-FAYSKDA 158
Query: 335 KQFTAVLGSTTI-FTGGI--RIDTSAVTVHPNWNT-NDYTHDIAVIRITS-VAYSNNVQA 499
K +T +G + T G R D + +HP + N++ +D+A+I++ S + Y++ V+
Sbjct: 159 KDYTIAVGEHDLNATDGYEQRPDVERIILHPKYAPHNNHDYDVALIKLASPLQYNDRVRP 218
Query: 500 IPLPSASDVNRDFVGLTGTISGYGKTSGAQTSIPLTSVLYQTSVPVI 640
+ LPS + + ISG+G A VL+Q +VP++
Sbjct: 219 VCLPSLKEDLEE--NTQCYISGWGHLQEAGHG---PWVLHQAAVPLV 260
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 58.0 bits (134), Expect = 6e-09
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Frame = +2
Query: 257 ICGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGSTTIFTGGIRIDTSAVTVHPNW-NTN 433
ICGGSL+S+T ++TAAHC + +T ++G+ G SA H +
Sbjct: 339 ICGGSLLSSTWVLTAAHCVIRSHN-TSDYTVIVGAHKRVLDGTEHKLSAFYKHEKYVGGK 397
Query: 434 DYTHDIAVIRITS-VAYSNNVQAIPLPSASDVNRDFVGLTGTISGYGKTSGAQTSIPLTS 610
D HD+A+IR+ A+S V + LP D+ + T G+G+ SG+ T
Sbjct: 398 DKKHDLALIRLAKPAAFSAKVSPVCLPKQGDLLGNEKNCYTT--GWGRVSGSMMFFMATK 455
Query: 611 VLYQTSVPVI 640
L Q PV+
Sbjct: 456 -LQQARTPVV 464
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 55.6 bits (128), Expect = 3e-08
Identities = 45/171 (26%), Positives = 86/171 (50%), Gaps = 13/171 (7%)
Frame = +2
Query: 167 RIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQ-- 340
RI+GG Q A P GL L +CGGSL++ ++TAAHC D + ++
Sbjct: 432 RIVGG-QTAKVEDWPWQAGLKKGLDD--TIVCGGSLINREWVVTAAHCI-DRNNPSRTGC 487
Query: 341 ------FTAVLGSTTIFT---GGIRIDTSAVTVHPNWNTNDYTHDIAVIRITS--VAYSN 487
+LG + + I D + + +HP+++ T+D+A+IR+ + ++
Sbjct: 488 VVPDPPIRVILGESDVTKHEGNEIHRDVAQICIHPDYHEIKLTNDLALIRLRTPITTFTK 547
Query: 488 NVQAIPLPSASDVNRDFVGLTGTISGYGKTSGAQTSIPLTSVLYQTSVPVI 640
+V+ + LP+++ + VG T++GYG+ + L++ L ++PV+
Sbjct: 548 HVRPVCLPTSATPDL-AVGTNCTVTGYGRVGENE---DLSTQLRHATIPVL 594
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 54.4 bits (125), Expect = 7e-08
Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Frame = +2
Query: 155 LESSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQA 334
+ SR+IGG A P + AL + G ICGGSLVS+T ++TAAHC + A
Sbjct: 472 ITQSRVIGGKD-AIPGAWPWQI---ALKSRGNF-ICGGSLVSSTWVVTAAHCVARSSNPA 526
Query: 335 KQFTAVLGSTTIFTGGIRIDT---SAVTVHPNWNTNDYTHDIAVIRITSVA-YSNNVQAI 502
Q+ ++G + +T V HP +N ++DIA+I + S A S+ V +
Sbjct: 527 -QYQIIVGEHNRNVNEVTEETLNVKKVIAHPQYNNPRLSNDIALIELASPAKLSSRVNPV 585
Query: 503 PLP 511
LP
Sbjct: 586 CLP 588
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 54.0 bits (124), Expect = 1e-07
Identities = 34/120 (28%), Positives = 68/120 (56%), Gaps = 5/120 (4%)
Frame = +2
Query: 260 CGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGSTTIFTG---GIRIDTSAVTVHPNWNT 430
CGG+L++ ++TAAHC+ D S ++T +G + + G + A+ VHP +N+
Sbjct: 1266 CGGALIAADWVLTAAHCF-DRFSMPPEWTVQVGVSDMRRRDGKGQSLSIKAIFVHPQYNS 1324
Query: 431 NDYTHDIAVIRITSVA-YSNNVQAIPLPSASDVNRDFVGLTGTISGYGKTSGAQ-TSIPL 604
+ + HD+AV+++ A +++ V I + + +V G ++G+G++ + T+IPL
Sbjct: 1325 SSHEHDLAVLQLQQPAEFNSRVSPICIVANEEVQ---AGRACAVAGWGQSYLPRITTIPL 1381
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 53.6 bits (123), Expect = 1e-07
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Frame = +2
Query: 149 KRLESSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQS 328
+R + RI+GG + +PH + ICGGSL+S ++TAAHC +
Sbjct: 24 RRPDGVRIVGGDEA-----VPHSWPWQVSIRLKGSHICGGSLLSPLWLLTAAHCVIRSNN 78
Query: 329 QAKQFTAVLGSTTIFTGGIRIDTSAVTVHPNW-NTNDYTHDIAVIRITSVA-YSNNVQAI 502
A +T ++G+ G S H + D HD+A+I++ A +S V +
Sbjct: 79 SA-DYTVIVGAHKRVLDGTEHKLSTFYKHEKYVGGKDKKHDLALIKLAKPATFSTKVSPV 137
Query: 503 PLPSASDVNRDFVGLTGT-ISGYGKTSGAQTSIP 601
LP D+ ++ T S GKT A TS P
Sbjct: 138 CLPKQGDLMKERENCFATGKSANGKT--ALTSNP 169
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 53.2 bits (122), Expect = 2e-07
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Frame = +2
Query: 164 SRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQF 343
SRIIGG+ AA P ++ + W CGG+L+ ++TAAHC + + +
Sbjct: 283 SRIIGGT-TAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHCVFQ-NIEPSNY 340
Query: 344 TAVLGS--TTIFTGGIRIDTSAVTVHPNWNTN-DYTHDIAVIRITSVA-YSNNVQAIPLP 511
LG+ G + I +A+ +H + T+ Y +DIA++++ + A + + LP
Sbjct: 341 KIKLGAHDRESSEGALTIPVTAIHMHTRFMTDGSYGYDIAIMKLANPAPIGHTISPACLP 400
Query: 512 SASDVNRDFVGLTGTISGYGKTSGAQTSIPLTSVLYQTSVPVI 640
D + G ++G+G T L L Q +PV+
Sbjct: 401 GLYD--QVTSGTMCYVTGWGMTEYGNAGARL---LQQARIPVV 438
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 52.0 bits (119), Expect = 4e-07
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Frame = +2
Query: 167 RIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQFT 346
R++ GS+V S P V L+ ++ CGG+L+ ++TAAHC + + +
Sbjct: 43 RVVSGSEVEPQSW-PWQVHLLQSRDGSFLHKCGGALIDREWVVTAAHCVFQ-EPDVSHYK 100
Query: 347 AVLGSTTIFTGGIR------IDTSAVTVHPNWNTN-DYTHDIAVIRITSVAYSNN-VQAI 502
+LG F I+ D S + +H + T+ Y +DIA+++++ A N V+ +
Sbjct: 101 VILGD---FNRDIKEPTEQEFDVSTLHLHQRFLTDKGYGYDIALLKLSRPAVINEFVRTV 157
Query: 503 PLPSASDVNRDFVGLTGTISGYGKTS 580
LP+ +R G I+G+GKT+
Sbjct: 158 CLPAQG--SRALEGTMCFITGWGKTN 181
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 51.2 bits (117), Expect = 7e-07
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Frame = +2
Query: 257 ICGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGSTTIFTGG----IRIDTS-------A 403
ICGGS+V++ I+TAAHC A ++T S T G ++D S
Sbjct: 1808 ICGGSIVNSQWIVTAAHCVTTKPPGASRYTMYAFSDLNVTLGEHQLYQLDGSEQNIPIEG 1867
Query: 404 VTVHPNWNTNDYTHDIAVIRITS-VAYSNNVQAIPLPSASDVNRDFVGLTGTISGYGKTS 580
+ VHP++N DY DIA++++ + ++ V + LP A+ + G +SG+G+
Sbjct: 1868 IVVHPSYNDLDY--DIALLKLRQPITFNAYVSQVCLPQAALL----AGTPCYVSGWGRIG 1921
Query: 581 GAQTSIPLTSVLYQTSVPVI 640
S P ++VL + S+P++
Sbjct: 1922 ---ESSPGSNVLQEASIPLV 1938
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 50.4 bits (115), Expect = 1e-06
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Frame = +2
Query: 164 SRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQF 343
SRI+GG + A + P V ++ CGGSL+ I+T++HC+W + + QF
Sbjct: 244 SRIVGGRE-APRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQF 302
Query: 344 TAVLGSTTI--FTGGIR-IDTSAVTVHPNWNTNDY----THDIAVIRITSVA-YSNNVQA 499
LG + + G I + +HP D +D+A+I++ A + V +
Sbjct: 303 EIRLGEHDVRKYEGFEEIIQGDKLYIHPGLVVGDLISPGDYDVALIKLKRPAVFHKCVYS 362
Query: 500 IPLPSASDVNRDFVGLTGTISGYGKTS-GAQTSIPLTSV 613
+ LPS + N G ++G+GKT+ G+ S+ L V
Sbjct: 363 VCLPSVT-ANLT-TGTKCYVTGWGKTAEGSPYSLVLNEV 399
Score = 35.9 bits (79), Expect = 0.028
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Frame = +2
Query: 227 VALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQA----KQFTAVLG----STTIFTGG 382
V L+ G CGGSL+ ++T+ HC +D + A + LG STT
Sbjct: 550 VDLVVNGTRHNCGGSLIDKQWVVTSGHC-FDQRPYAYIPLSYYEFRLGEHRESTTEGWEE 608
Query: 383 IRIDTSAVTVHPNWNTN--DYT--HDIAVIRITSVA-YSNNVQAIPLPSASDVNRDFVGL 547
I I + +HP + DYT +DIA++++ A + V ++ LP S D G
Sbjct: 609 I-IKGEKLFIHPKYKLGGLDYTGDYDIALVKLKRPAVFYKRVHSVCLPEKSWSPPDGAGC 667
Query: 548 TGTISGYGKTS 580
++G+G+T+
Sbjct: 668 --YVTGWGRTA 676
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 50.0 bits (114), Expect = 2e-06
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Frame = +2
Query: 167 RIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQ---AK 337
RI+GG + P HV L+ G CGGSL+S ++TAAHC
Sbjct: 107 RIVGGHDTVKGAY-PWHV----LIRKGGHVACGGSLISEKWVLTAAHCVTHRNGNILPRS 161
Query: 338 QFTAVLG---STTIFTGGIRI-DTSAVTVHPNWNTNDYTHDIAVIRITSVA-YSNNVQAI 502
+F LG +T +++ + S + HP ++ + D+A+I++ A S V+ I
Sbjct: 162 RFQVQLGLYRTTLPNEPQVQLRNISEIRTHPQFDHVLFDADLALIKLDGEAIISEYVRPI 221
Query: 503 PLPSASD-VNRDFVGLTGTISGYGKTSGAQTSIP---LTSVLYQTSVPVI 640
LP D + G G+GKT G Q + L L +T +P++
Sbjct: 222 CLPETDDQASLISPSKFGMAVGWGKTVGRQGDVSVKNLADALKETCMPIV 271
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 50.0 bits (114), Expect = 2e-06
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
Frame = +2
Query: 134 KAYELKRLESSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCW 313
K + ++ L I+GG+ A P V + L ++ ICGG+++S ++TAAHC
Sbjct: 534 KGHRVRPLAMPMIMGGAN-AEHGEWPWQVSM-KLNSSSLPHICGGNVISPWWVLTAAHCV 591
Query: 314 WDGQSQAKQFTAVLGSTTIF-TGGIR--IDTSAVTVHPNWNTNDYTHDIAVIRIT-SVAY 481
D +A +G +F G I + H N++ N +D A++++T + +
Sbjct: 592 QD--ERASNIKLTMGEWRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNF 649
Query: 482 SNNVQAIPLPSASDVNRDF-VGLTGTISGYGKTSGAQTSIPLTSVLYQTSVPVI 640
+ VQ + LP + DF G ++G+G T+ P + L + +P++
Sbjct: 650 TQYVQPVCLPDS-----DFPAGTLCYVTGWGSTN--YRGSPSPNYLQEVGLPLV 696
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +2
Query: 392 DTSAVTVHPNWNTNDYTHDIAVIRITS-VAYSNNVQAIPLPS-ASDVNRDFVGLTGTISG 565
D +HP+++ + Y DIA+IR+ V +++ V+ I LPS ASD + ++GTISG
Sbjct: 192 DAEMYKIHPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQANVSGTISG 251
Query: 566 YGKTSGAQTSIPLTSVLYQTSVPVI 640
+GK + + + L++ +VP++
Sbjct: 252 WGKRKLWRDRV--ANRLHEATVPIV 274
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 48.4 bits (110), Expect = 5e-06
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Frame = +2
Query: 257 ICGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGSTTIFTGGIRIDTS----AVTVHPNW 424
ICGGSL++ ++TAAHC D +T V+G+ TG + + + H +
Sbjct: 56 ICGGSLIAKDWVVTAAHC-VDRNPTPSGYTVVVGAHH-RTGNTPVQNTFRLKQLFKHEQF 113
Query: 425 NTNDYTHDIAVIRI-TSVAYSNNVQAIPLPSASDVNRDFVGLTGTISGYGKTSGAQTSIP 601
+ +DIA++++ V S+ V + LPS+ +R G I+G+G+T G ++
Sbjct: 114 SMRHLKNDIALLQLHEPVKASDKVNTVCLPSSG--SRAQAGARCYITGWGRTVGGGSA-- 169
Query: 602 LTSVLYQTSVPV 637
+L Q +PV
Sbjct: 170 -AGILQQAMLPV 180
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 48.0 bits (109), Expect = 6e-06
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Frame = +2
Query: 257 ICGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGS--TTIFTGGIRI-DTSAVTVHPNWN 427
ICGGSLVS T ++TAAHC G S + V G G + D + HP +N
Sbjct: 92 ICGGSLVSPTWVVTAAHC-IAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPTYN 150
Query: 428 TNDYTHDIAVIRITSVAYSNNVQAIPLPSASDVNRDFVGLTGTISGYGK 574
+ ++DIA+I ++S P+P + ++ VG I+G+GK
Sbjct: 151 SPQLSNDIALIELSS----------PVPLSDRGHQVSVGSKCFITGWGK 189
Score = 31.9 bits (69), Expect = 0.45
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Frame = +2
Query: 161 SSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQ 340
S+RI+GG+ A P L +T CGGSL+ ++TA HC +
Sbjct: 661 STRIVGGT-AAKQGDWPWQA---QLRSTSGFPFCGGSLIHPQWVLTATHC--VSSRRPTD 714
Query: 341 FTAVLGSTTIFTG-GIR--IDTSAVTVHPNWNTN-DYTHDIAVIRITSVAYSN 487
LG+ G+ I + +HP + HDIA+I++ A N
Sbjct: 715 LNIRLGAHNRRANLGMEQDIKVEKIIMHPGYRKPVGLAHDIALIKLLKPANLN 767
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 46.8 bits (106), Expect = 1e-05
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Frame = +2
Query: 152 RLESSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQ 331
R +SRI+GG+ A P L+ G+ CGG+LV ++TA+HC D + +
Sbjct: 205 RPPASRIVGGND-AMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCINDIRPE 263
Query: 332 -AKQFTAVLG---STTIFTGGIRIDTSAVTVHPNWN--TNDYTHDIAVIRITSVA 478
K LG T I + RI + + +H ++N + Y +D+A+IR+ A
Sbjct: 264 DYKTHIISLGGHNKTGIMSVEQRIGIAKIYLHADYNLYPHQYNNDVALIRLAKPA 318
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 45.2 bits (102), Expect = 5e-05
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Frame = +2
Query: 167 RIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQFT 346
RI+GG + S I H +VA++ + CGGSLV I+TAAHC+ S ++
Sbjct: 40 RIMGGQR----STIEQHPWMVAMMLDSAQA-CGGSLVPEDWIVTAAHCF---DSNRLRWR 91
Query: 347 AVLGSTTIFTGGIRIDTSAVTVHPNWNTN-------DYTHDIAVIRI-TSVAYSNN---V 493
V G+ SA+ HP + +N +D+A++++ SVA + +
Sbjct: 92 VVAGNDMPSKAVNTTGVSAIWRHPQYKSNIASLESGPCDYDVALVKLEKSVATTPKTVPI 151
Query: 494 QAIPLPSASDVNRDFVGLTGTISGYGKTS-GAQTSIPLTSV 613
+P + D+ RD ++G+G+ S G + S+ L V
Sbjct: 152 CLVPRDTPRDLKRDCY-----VAGWGRRSFGGEQSLALREV 187
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 43.6 bits (98), Expect = 1e-04
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Frame = +2
Query: 260 CGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLG---STTIFTGGIRIDTSAVTVHPNWNT 430
CGGSL+ I+T++HC+W + + QF LG I I + +HP
Sbjct: 15 CGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIEGYEEIIQGDQLYIHPGLVV 74
Query: 431 NDY----THDIAVIRITSVA-YSNNVQAIPLPSASDVNRDFVGLTGTISGYGKTSGAQTS 595
D +D+A+I++ A + V ++ LPS + N G ++G+GKT+
Sbjct: 75 GDLISPGDYDVALIKLKRPAVFHKRVHSVCLPSVT-ANLT-TGTKCFVTGWGKTAEGS-- 130
Query: 596 IPLTSVLYQTSVPVI 640
P + VL + V ++
Sbjct: 131 -PYSPVLNELEVDIV 144
Score = 39.1 bits (87), Expect = 0.003
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Frame = +2
Query: 167 RIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQA---- 334
RI+GG + A+ + P V LV G CGGSL+ ++T+ HC +D + A
Sbjct: 249 RIVGGRE-ASPNSWPWQVDLVV---NGTRHNCGGSLIDKQWVVTSGHC-FDQRPYAYIPL 303
Query: 335 KQFTAVLG----STTIFTGGIRIDTSAVTVHPNWNTN--DYT--HDIAVIRITSVA-YSN 487
+ LG STT I I + +HP + DYT +DIA++++ A +
Sbjct: 304 SYYEFRLGEHRESTTEGWEEI-IKGEKLFIHPKYKLGGLDYTGDYDIALVKLKRPAVFYK 362
Query: 488 NVQAIPLPSASDVNRDFVGLTGTISGYGKTS 580
V ++ LP S D G ++G+G+T+
Sbjct: 363 RVHSVCLPEKSWSPPDGAGC--YVTGWGRTA 391
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Frame = +2
Query: 161 SSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQ 340
+SRI+GG+ A P L TTG+ CGGSL+ + ++TAAHC + A+
Sbjct: 388 TSRIVGGA-AANPGDWPWQAQLRT--TTGF-PYCGGSLIHSNWVLTAAHC-ISSKRPAEV 442
Query: 341 FTAV-----LGSTTIFTGGIRIDTSAVTVHPNWNTNDYTHDIAVIRI 466
+ LGS T I++ SA+ H N+N+ +DIA++++
Sbjct: 443 VVRLGAHSRLGSLTTDMQDIKV--SAIITHSNYNSRTMYNDIALLKL 487
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +2
Query: 233 LLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGS-TTIFTGGIRID--TSA 403
L TT CGGSL++ I+TA HC + QA LG+ + T G D +
Sbjct: 28 LRTTSGFPYCGGSLIAPQWILTATHC--VERKQASSIVIRLGARRRVATVGTEKDYIVTK 85
Query: 404 VTVHPNWN-TNDYTHDIAVIRI 466
V HP+++ Y+HDIA++++
Sbjct: 86 VITHPSYHKPKTYSHDIALLKL 107
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 42.7 bits (96), Expect = 2e-04
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Frame = +2
Query: 164 SRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQF 343
SRI+GGS A P V L+ +G CGG+LV+ +ITAAHC D + Q
Sbjct: 629 SRIVGGS-TAPPGAWPWQVMLI--YNSG-RQFCGGTLVTPEWVITAAHCVVDKNPASIQV 684
Query: 344 TAVLGSTTIFTGGI--RIDTSAVTVHPNWNT-NDYTHDIAVIRI---TSVAYSNNVQAIP 505
T + RI ++ HP++ + ++DIA++R+ T + + N+ +P
Sbjct: 685 RLGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMP 744
Query: 506 LPSASDVNRDFVGLT--GTISGYGKTSGA--QTSIPL 604
+ N +T GT+S G A Q +PL
Sbjct: 745 NDTVHFPNGTMCYITGWGTLSSGGSQPEALNQAVVPL 781
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +2
Query: 164 SRIIGGSQVAAASVIPHHVGLVALLTTG-WMSICGGSLVSNTRIITAAHCWW 316
+RI+GG++ A P VG+ +G M ICGG+L++ ++TAAHC++
Sbjct: 125 ARIVGGNE-AGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHCFY 175
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 41.1 bits (92), Expect = 7e-04
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Frame = +2
Query: 149 KRLESSRIIGGSQVAAASVIPHHVGLVALLTTGW-MSICGGSLVSNTRIITAAHCWWDGQ 325
+R SR+I G A A P + L + G CGGSL+ + ++TAAHC G
Sbjct: 31 QRPSQSRVINGVD-ATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHC-VAGI 88
Query: 326 SQAKQFTAVLGSTTI-FTGGI--RIDTSAVTVHPNWNTNDYTHDIAVIRITSVAY 481
++++ +G+ + T + +I S + H ++++ T D+A+I++ S AY
Sbjct: 89 RNPRRYSVYVGAHELDGTTQVEEKISISKIYSHEKYSSSLLTSDVALIKL-SKAY 142
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Frame = +2
Query: 260 CGGSLVSNTRIITAAHCWWDGQSQAK-QFTAV-LGSTTIFTGGIR---IDTSAVTVHPNW 424
C G+LV I+T AHC G Q + QF V LG G +D V VH ++
Sbjct: 693 CMGTLVDQEWIMTTAHCLHVGAYQLQPQFIKVELGVHKRGQGKSSPKLLDVKRVEVHSSF 752
Query: 425 NTN--DYTHDIAVIRITS-VAYSNNVQAIPLPSASDVNRDFVGLTGTISGYGKTS 580
+ T +IA++++ + +++++ AI LP+ + G +G + G+GKT+
Sbjct: 753 KADLGKLTSNIALVQLAHPLNFTDDIHAICLPTRKETEVLRGGSSGVVIGWGKTT 807
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +2
Query: 380 GIRIDTSAVTVHPNWNTNDYTHDIAVIRITS-VAYSNNVQAIPLPSASDVNRDFVGLTGT 556
G + S +T HP ++ HDIA++R+++ V +++V I LPS R +G
Sbjct: 29 GKELTISKITYHPGFSFATADHDIAILRLSAPVLLTSSVNTICLPSQG--ARASLGGNCF 86
Query: 557 ISGYGKTSGAQTSIPLTSVLYQTSVPVI 640
ISG+G+ + + + L + L Q+ V +I
Sbjct: 87 ISGWGRINSSDMQL-LANKLQQSRVSII 113
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/71 (33%), Positives = 42/71 (59%)
Frame = +2
Query: 161 SSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQ 340
+S IIGG+ AA P V +L T + +CGG+L+++ ++TAA C+ D + +A +
Sbjct: 255 TSNIIGGTD-AAVGEWPWQV---SLYLTHYGPVCGGTLLTSEWVLTAARCFRDNK-RAGE 309
Query: 341 FTAVLGSTTIF 373
+ +LG T +
Sbjct: 310 WKVILGETDFY 320
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Frame = +2
Query: 260 CGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGS-----TTIFTGGIRIDTSAVTVHPNW 424
CGGSL+S+ ++TAAHC ++ +T V+G+ +T +R+ S + HP +
Sbjct: 132 CGGSLISDRWVVTAAHCIHRNKNPG-GYTVVVGAHKKRGSTSVQQSLRL--SQIIEHPKY 188
Query: 425 NTNDYTHDIAVIRITS 472
N +DIA++ + +
Sbjct: 189 NDRRIVNDIALLELAT 204
Score = 37.5 bits (83), Expect = 0.009
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Frame = +2
Query: 260 CGGSLVSNTRIITAAHCWW-----DGQSQAKQFTAVLGS-----TTIFTGGIRIDTSAVT 409
CGGSL+S+ ++TAA G+ +T V+G+ +T +R+ S +
Sbjct: 455 CGGSLISDRWVVTAAQGIHRNKNPGGRQNPGGYTVVVGAHKKRGSTSVQQSLRL--SQII 512
Query: 410 VHPNWNTNDYTHDIAVIRITSVAYSNNVQAIPLPSASDVNRDFVGLTGTISGYGKTSGAQ 589
HP +N +DIA++ + + ++ + +D R G I+G+G +G
Sbjct: 513 EHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTD-QRPAPGKRCYITGWGAINGDT 571
Query: 590 TSIPLTSVLYQTSVPV 637
P +L Q +P+
Sbjct: 572 QQSP--DILQQAMLPI 585
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 39.9 bits (89), Expect = 0.002
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Frame = +2
Query: 260 CGGSLVSNTRIITAAHCWWDGQSQAKQFTAV---LGS-TTIFTGGI--RIDTSAVTVHPN 421
CGG+LVS ++TAAHC D K + + LG + G R + + VHP
Sbjct: 377 CGGTLVSPQWVVTAAHC-VDHVKDPKNYNELAITLGEHKRSASEGTEQRFSVARIIVHPQ 435
Query: 422 W-NTNDYTHDIAVIRITSVAYSNN-VQAIPLPSASDVNRDFVGLTGTISGYGKTSGAQTS 595
+ +DIA+I++ A N V LP + D G +G+G T G
Sbjct: 436 YFEPTAINNDIALIKLNKPARLNKYVNLACLPRQGEELSD--GKICYATGWGLTVGGDWK 493
Query: 596 IPLTSVLYQTSVPVI 640
+ VL QT +PV+
Sbjct: 494 -SQSDVLKQTPLPVV 507
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 ICGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGSTTIFTGGIRIDTSAVTVHPNWNTND 436
ICG SL++ +TAAHC A +T V G+ G S + H ++
Sbjct: 265 ICGASLLTPGWALTAAHC-LTLSDDASDYTLVAGAHQRENDGQVFGISKIRKHKGFSMVH 323
Query: 437 YTHDIAVIRI-TSVAYSNNVQAIPLPS 514
+D+A++++ T V S+ V I LPS
Sbjct: 324 VRNDVALLKLSTYVQLSDKVGTICLPS 350
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +2
Query: 167 RIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCW---WDGQSQAK 337
RI+GG + AA P V ALL G CGGSLV+ ++TA HC+ W A
Sbjct: 53 RIVGGVE-AAPGAWPWQV---ALLMNG-TQFCGGSLVNENWVVTARHCFHELWSSMDTA- 106
Query: 338 QFTAVLGSTTIFT 376
+TA LG + T
Sbjct: 107 SWTASLGEHHLVT 119
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +2
Query: 260 CGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGSTTIFTGGIRIDTSAVT---VHPNW-N 427
C G+L+ +ITAAHC +G+ TA+L + + +D AV + P W +
Sbjct: 153 CSGTLIGPCHVITAAHCIHNGKWFVSPLTAILVGVSNTSSTDELDYFAVEGIYLPPEWLS 212
Query: 428 TNDYT--HDIAVIRIT 469
D++ HD A++++T
Sbjct: 213 GKDFSHEHDYALLKLT 228
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 38.3 bits (85), Expect = 0.005
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 2/160 (1%)
Frame = +2
Query: 164 SRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQF 343
SR++ G A S P + L ICGGSL++ ++TAAHC D +
Sbjct: 79 SRVVNGDNAAQHSW-PWQISL----RVNGRHICGGSLITPEWVLTAAHCVEDFPHPSAH- 132
Query: 344 TAVLGSTTIFTGGIRIDTSAVTVHPNWNTNDYTHDIAVIRITS-VAYSNNVQAIPLPSAS 520
+ + R+ + + H +++ + +D+A++++ + + S+ V + LP +
Sbjct: 133 --RIKERSAIQQEFRL--TKLFKHKDFSMSHLKNDVALLKLDNPIQPSDKVNTVCLPERN 188
Query: 521 DVNRDFVGLTGTISGYGK-TSGAQTSIPLTSVLYQTSVPV 637
+R VG I+G+G+ G Q S +L Q +PV
Sbjct: 189 --SRAQVGAQCFITGWGRLVGGGQPS----EILQQAMLPV 222
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 37.5 bits (83), Expect = 0.009
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Frame = +2
Query: 161 SSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQ 340
++R+I GS+ A P L L TG+ ICGGSLV+ ++TAAHC A +
Sbjct: 29 ATRVISGSE-ALLGEWPWQAWL-HLQHTGF--ICGGSLVAPGWVLTAAHCIL--SDDASK 82
Query: 341 FTAVLGST---TIFTGGIRIDTSAVTVHPNW-NTNDYTHDIAVIRITSVAYSNN-VQAIP 505
+ VLG I ID + V H + N +D+A++++ + V +
Sbjct: 83 YKVVLGDVDRKKIEGSEQMIDVAMVIKHYAYGNPVPNANDVALLKLRDYPTKTDFVNTVC 142
Query: 506 LPSASDVNRDFVGLTGTISGYGKT 577
LP D +G I+G+G++
Sbjct: 143 LPQYMD--HVEIGKDCFITGWGRS 164
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 37.5 bits (83), Expect = 0.009
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 8/135 (5%)
Frame = +2
Query: 260 CGGSLVSNTRIITAAHC--WWDGQSQAKQFTAVLGSTTIFTGGIR-----IDTSAVTVHP 418
CGG+L++ ++TAAHC + D LG I + I ++ + HP
Sbjct: 1192 CGGTLIAEDWVLTAAHCVVYKDSGIPYHGLRVFLGVHDITARHMDEHVQIIPSAGIYSHP 1251
Query: 419 NWNTNDYTHDIAVIRITSVA-YSNNVQAIPLPSASDVNRDFVGLTGTISGYGKTSGAQTS 595
++ Y DIA+IR+ A + V+ + LP+ G + G+G T + S
Sbjct: 1252 RFSWRTYDSDIALIRLRWKANITEYVRPVCLPNGYQRRLVKPRAKGVMLGWGVTENKRPS 1311
Query: 596 IPLTSVLYQTSVPVI 640
L + VPV+
Sbjct: 1312 ----KTLKEAIVPVV 1322
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +2
Query: 149 KRLESSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQS 328
+R +R+IGG A PH L +CGG+L+S ++TA HC GQ
Sbjct: 429 RRPSGARVIGGEDAA-----PHSWPWQISLRVRGKHMCGGTLISPDWVLTAGHC-VHGQL 482
Query: 329 QAKQFTAVLGS 361
+T V+G+
Sbjct: 483 DPSGYTVVVGT 493
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 257 ICGGSLVSNTRIITAAHCWWD 319
+CGG+L+S+ ++TA+HC D
Sbjct: 871 LCGGALISDRWVVTASHCIHD 891
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/78 (33%), Positives = 37/78 (47%)
Frame = +2
Query: 149 KRLESSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQS 328
+R SSR++ G+ A P + L T ICGGSL++ ++TAAHC D
Sbjct: 31 RRPASSRVVNGAN-APQHAWPWQISL----RTNGQHICGGSLITPEWVLTAAHC-VDHYP 84
Query: 329 QAKQFTAVLGSTTIFTGG 382
+T V+G GG
Sbjct: 85 YPGAYTVVVGWGRTVGGG 102
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 37.1 bits (82), Expect = 0.012
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 6/170 (3%)
Frame = +2
Query: 149 KRLESSRIIGGSQVAAASVIPHHVGLVALLTTGWMSI--CGGSLVSNTRIITAAHCWWDG 322
KR +RI+ G + + H +A L G + CG +L+ ITAAHC
Sbjct: 319 KRPPGARIVNGQEA-----VSHSWPWIASLRKGRSNYHTCGATLIRPGWAITAAHC---- 369
Query: 323 QSQAKQFTAVLGS---TTIFTGGIRIDTSAVTVHPNWNTNDYTHDIAVIRI-TSVAYSNN 490
+ ++T ++GS I V H ++ +Y DIA++ + S ++
Sbjct: 370 VMRPDKYTVIVGSHSRDASEPSAQNIKVRRVYRHRGFSMANYVDDIALLELERSAVINDK 429
Query: 491 VQAIPLPSASDVNRDFVGLTGTISGYGKTSGAQTSIPLTSVLYQTSVPVI 640
V LPS VG I+G+G+ + + LT L Q VP++
Sbjct: 430 VSTACLPSGEPK----VGAICYIAGWGRLQ-SLGDVALT--LQQAKVPIV 472
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 227 VALLTTGWMSICGGSLVSNTRIITAAHC 310
++L G CGG+L+S+ ++TA+HC
Sbjct: 45 ISLRPYGRYHSCGGTLISDRWVVTASHC 72
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 36.7 bits (81), Expect = 0.016
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 404 VTVHPNWNTNDYTHDIAVIRITSVAYSNN-VQAIPLPSASDVNRDFVGLTGTISGYGKTS 580
V VHPN+ D+A++R++ A N V I LP + + VG I+G+G+T
Sbjct: 1408 VIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGE--SEAVGKNCYITGWGRTG 1465
Query: 581 GAQTSIPLTSVLYQTSVPVI 640
+ P SVL + +P++
Sbjct: 1466 ---YNRPGASVLQEAMMPIV 1482
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 36.7 bits (81), Expect = 0.016
Identities = 24/94 (25%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Frame = +2
Query: 257 ICGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGSTTIFT--GGIRI-DTSAVTVHPNWN 427
+CGGSL++ ++TA HC +++ VLG T G +I + HP+++
Sbjct: 87 VCGGSLIAPQWVLTAGHCIL--TEDPEKYRVVLGDVDRDTTEGSEQIFHVRRIIKHPHYS 144
Query: 428 TN-DYTHDIAVIRITSVAY-SNNVQAIPLPSASD 523
+ Y +D+A+++++ A+ ++ V + LP+ +
Sbjct: 145 RDVPYDNDVALLQLSRPAFVTSFVNTVCLPAQEE 178
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 36.7 bits (81), Expect = 0.016
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
Frame = +2
Query: 164 SRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQF 343
SRI+GG++ A + P L L + CGGSL+ ++TAAHC Q +
Sbjct: 28 SRIVGGTE-APINGWPWQAML--LRSPNGDQFCGGSLIDPGWVLTAAHCLVGEQPDSALL 84
Query: 344 TAVLGSTTIFTGGIRIDTSAVTVHPNWNTN-DYTHDIAVIRITSVA-YSNNVQAIPLP-S 514
A S I + + H N+++ + +DIA++++ + A N V + L +
Sbjct: 85 GAHYRSNKTVGTEKDIKVAQIIPHKNYHSPIEMANDIALLKLENPANLVNGVGTVCLANN 144
Query: 515 ASDVNRDFVGLTGTISGYGKTSGAQTSIPLTSVLYQTSVPVI 640
+ + D G I+G+G S + L Q SVP++
Sbjct: 145 NTHLPVDEFGKC-YITGWGSLSSGGAA---PDRLMQASVPLV 182
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 36.3 bits (80), Expect = 0.021
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Frame = +2
Query: 164 SRIIGGSQVAAASVIPHHVGLVALLTTGWMS-ICGGSLVSNTRIITAAHC-WWDGQSQAK 337
+RI+GG++ A P A+L + + CGG+LV +ITAAHC + G + K
Sbjct: 138 TRIVGGTK-APPGAWPWQ----AMLRSNYGGQFCGGTLVHPQWVITAAHCVYRRGPNDFK 192
Query: 338 QFTAVLGSTTIFTGGIRIDTSAVTVHPNWN-TNDYTHDIAVIRITSVAYSNNVQAIPLPS 514
+ S V HP+++ Y HDIA+I + A N +A+ L
Sbjct: 193 IRMGAHFRKGDYGTEQDFSLSRVITHPSYHKPTRYAHDIALIELAKPAVIN--KAVGLAC 250
Query: 515 ASD 523
+D
Sbjct: 251 LAD 253
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 35.5 bits (78), Expect = 0.037
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2
Query: 149 KRLESSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHC 310
+R SR+IGG + A P V + + G + CGG+L+S+ +ITAAHC
Sbjct: 470 RRPPMSRVIGG-EAARPYSWPWQVSV----SMGKLHSCGGALISSKWVITAAHC 518
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 35.5 bits (78), Expect = 0.037
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Frame = +2
Query: 155 LESSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQA 334
L RI+GG V++ + P V L LL +C GSL+ IITA HC+ D +S A
Sbjct: 49 LIDKRIVGGV-VSSEGLWPWQVAL--LLND--RQVCAGSLIEARWIITAGHCFKDPRSSA 103
Query: 335 --KQFTAVLGSTTIFTGGIRID----TSAVTVHPNWNTNDYTHDIA 454
++ +LG + + + VHP +N D A
Sbjct: 104 DPDKWKVLLGERRRHSSKRHFERAQQVKRIIVHPKFNGKFVNGDFA 149
>SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06)
Length = 379
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/71 (23%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 260 CGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGSTTIFTGGIR-IDTSAVTVHPNWNTND 436
C G+L+S ++T+AHC +G+S ++ +A+ +G +R ++ V + W
Sbjct: 168 CSGTLISRQHVLTSAHCVHNGKSYLQRTSALRVGFLKRSGKVRWVEVRFVRIPQAWTRVQ 227
Query: 437 YT-HDIAVIRI 466
+ +D +V+ +
Sbjct: 228 HVRNDFSVLEL 238
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +2
Query: 164 SRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQF 343
+RI+GG++ A + P L + G CGGSL+ ++TAAHC + Q +
Sbjct: 258 TRIVGGTE-APVNGWPWQA---MLRSAGGSQFCGGSLIHPEWVLTAAHCLENTQPSDIEI 313
Query: 344 TAVLGSTTIFTGGIRI 391
+ + + +F +R+
Sbjct: 314 SLITRAFILFIEVMRL 329
Score = 31.1 bits (67), Expect = 0.79
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +2
Query: 389 IDTSAVTVHPNWNTN-DYTHDIAVIRI-TSVAYSNNVQAIPLP-SASDVNRDFVGLTGTI 559
I S + H ++N+ Y+HDIA+I++ T N V + LP + + D + I
Sbjct: 19 IKVSKIVSHTSYNSPLQYSHDIALIKLATPAIMGNGVGTVCLPDTIQKLPLDDLNQKCWI 78
Query: 560 SGYGKTSGAQTSIPLTSVLYQTSVPVI 640
+G+G + + L Q SVP++
Sbjct: 79 TGWGTLASGGNQ---PNKLMQASVPLV 102
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +2
Query: 134 KAYELKRLESSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCW 313
K Y KR RI+GG + +A P AL G CGGS++ + ++TAAHC+
Sbjct: 19 KTYTRKR----RIVGGIE-SANGAWPWQA---ALFLNGTHHRCGGSVIKSQWVVTAAHCF 70
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +2
Query: 260 CGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGSTTIFTGGIRI-DTSAVTVHPNWNTND 436
CG SL+S +TAAHC + A A + ++ S V H ++
Sbjct: 111 CGASLLSPGWALTAAHCVQRSSNPADYTLAAGAHRRVNDAHAQVLRVSQVISHKEFSMGH 170
Query: 437 YTHDIAVIRITS-VAYSNNVQAIPLPSASD 523
+D+ ++R+++ V S+ + I LP+ D
Sbjct: 171 LRNDVTLLRLSAPVQLSDKIGTICLPAHGD 200
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +2
Query: 164 SRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQF 343
+RI+GG++ A + P L + G CGGSL+ ++TAAHC + Q +
Sbjct: 218 TRIVGGTE-APVNGWPWQA---MLRSAGGSQFCGGSLIHPEWVLTAAHCLENTQPSDIEI 273
Query: 344 TAVLGSTTIFTGGIRI 391
+ + + +F +R+
Sbjct: 274 SLITRAFILFIEVMRL 289
Score = 31.1 bits (67), Expect = 0.79
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +2
Query: 389 IDTSAVTVHPNWNTN-DYTHDIAVIRI-TSVAYSNNVQAIPLP-SASDVNRDFVGLTGTI 559
I S + H ++N+ Y+HDIA+I++ T N V + LP + + D + I
Sbjct: 363 IKVSKIVSHTSYNSPLQYSHDIALIKLATPAIMGNGVGTVCLPDTIQKLPLDDLNQKCWI 422
Query: 560 SGYGKTSGAQTSIPLTSVLYQTSVPVI 640
+G+G + + L Q SVP++
Sbjct: 423 TGWGTLASGGNQ---PNKLMQASVPLV 446
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 33.1 bits (72), Expect = 0.20
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Frame = +2
Query: 260 CGGSLVSNTRIITAAHC---WWDGQSQAKQFTAVLGSTTIFTGGIRIDTSAVTVHPNWNT 430
CGG+LV ++TA+HC G + T RI + +HPN+++
Sbjct: 275 CGGTLVHPRWVVTASHCVHKLTTGDLYVRMGAHWKDGKTGSEQDFRI--QRIFMHPNYHS 332
Query: 431 N-DYTHDIAVIRITSVAYSNNVQAIP-LPSASDVNRDFVGLTGTISGYGKTSGAQTSIPL 604
Y +DIA++ + A + + L S D G ISG+G+ S S
Sbjct: 333 PVQYANDIALLLLDRPARLDRYTNLACLAPRSSPLPD--GTRCWISGWGRLSSGGAS--- 387
Query: 605 TSVLYQTSVPVI 640
+VL Q VP++
Sbjct: 388 PNVLMQAQVPLV 399
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Frame = +2
Query: 260 CGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGSTTIFTGGI----------RIDTSAVT 409
C G L+S +ITAAHC +D + Q LG+ +G + I +A+
Sbjct: 1114 CSGVLISARHVITAAHC-FDRIIRTDQIIVRLGAYIARSGRLDWGMGSRWEQEIAVAAIH 1172
Query: 410 VHPNWNT-NDYTHDIAVIRITSVAYSN 487
HP++ + +DIAV+++ A N
Sbjct: 1173 KHPSYQAPTRWANDIAVLKLARPAILN 1199
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +2
Query: 209 PHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQF 343
P H V L+TG C G+LVS ++TAAHC G+ K F
Sbjct: 157 PFHT--VVKLSTG----CTGTLVSPRHVLTAAHCLHTGRDYTKGF 195
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 31.5 bits (68), Expect = 0.60
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +2
Query: 167 RIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQ-AKQF 343
R++GG + A A P + L+ CGG+LV ++T AHC+ S+ + +
Sbjct: 28 RVVGGDE-AKAGQFPWQIALLFKR----QQYCGGALVHERWVVTGAHCFNPYTSEDPRDW 82
Query: 344 TAVLGSTTIFTGGI---RIDTSAVTVHPNWNT 430
LG + R ++TVH ++ +
Sbjct: 83 NVTLGEYNLAVNESFEQRRGVKSITVHEHYKS 114
>SB_30354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 199 ICDTTSCRTSGALNDRLDVNLRWLSCLQHEDHHCSSLLVGRP 324
+C+T SCR+ + D L R CL+H+ + L+GRP
Sbjct: 622 LCNTLSCRSLASRRDGLRARRR---CLRHKHQSRKATLLGRP 660
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 31.1 bits (67), Expect = 0.79
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +2
Query: 164 SRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHC 310
+RI+GG+ A + P L TT CGGSL+ I+TA HC
Sbjct: 52 TRIVGGT-AAKQNSWPWQA---QLRTTSGFPYCGGSLIHPQWILTATHC 96
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +2
Query: 260 CGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGSTTIFTGGIR-IDTSAVTVHPNW-NTN 433
C G+L+S ++T+AHC D +V G IR + V W
Sbjct: 179 CTGTLISTRHVLTSAHCVHDSSEYIISAKSVKVGFPRKNGKIRWAGVEYIRVPQGWTQER 238
Query: 434 DYTHDIAVIRI 466
D + D AV+++
Sbjct: 239 DVSFDYAVLKL 249
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 161 SSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHC 310
S+RI+GG+ A + P L + CGG+LV ++TA+HC
Sbjct: 21 STRIVGGT-AAPKNAWPWQA---QLRSASGFPFCGGTLVHPRFVVTASHC 66
>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1659
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 353 LGSTTIFTGGIRIDTSAVTVHPNWNTNDYTHDIAVIRITSVA-YSNNVQAIPLP 511
LGS G+++ + + H ++ + HDIA+I++ S A S V + LP
Sbjct: 1544 LGSHLRQDDGVQLKIAKIIPHKGYSRSHLRHDIALIKLASPAKLSATVNTVCLP 1597
>SB_24732| Best HMM Match : Notch (HMM E-Value=0.21)
Length = 223
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 190 CSGICDTTSCRTSGALNDRLDVNLRWLSCLQHEDHHCSSLLVGRPESS 333
CSG C T C G ND ++ + C ++ED + L G+ E S
Sbjct: 42 CSGPCKTFYCPYIGQRNDGDSIS-HYCYCAENEDFPGTQLFSGKNEFS 88
>SB_55031| Best HMM Match : GRP (HMM E-Value=5.3)
Length = 487
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = -1
Query: 448 IMGVIVSVPIRVDSY---S*GVNP---DPPSEYSRGAEYCCELLRLTLAVPPAVSCSDDP 287
++ + VP++V +Y S V P D + S E CC L +TL + AV D P
Sbjct: 400 VLPSVTEVPLKVPTYLRNSTEVLPNVTDVTLKRSHVTEMCCLQLSVTLHLMKAVFSFDMP 459
Query: 286 RVGDKRATA 260
R+ + TA
Sbjct: 460 RITESPVTA 468
>SB_13781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 506 LPSASDVNRDFVGLT-GTISGYGKTSGAQTSIPLTSVLYQTS 628
+P++ D+ R + +++ Y T +T PLTSV+Y TS
Sbjct: 177 IPASLDLKRILIKFAVASLAQYFTTVAMETCTPLTSVVYHTS 218
>SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 268 LSCLQHEDHHCSSLLVGRPESSEAVHSSTRLHDYIH 375
L+ H HH +S RP ++ T LHD+ H
Sbjct: 26 LTTRSHSRHHPTSTFTVRPHNTTDYTHDTTLHDHTH 61
>SB_16815| Best HMM Match : TIL (HMM E-Value=0.39)
Length = 225
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 190 CSGICDTTSCRTSGALNDRLDVNLRWLSCLQHEDHHCSSLLVGRPESS 333
CSG C T C G ND ++ + SC ++ED + G+ E S
Sbjct: 42 CSGPCKTFYCPYIGQRNDGDSIS-HYCSCAENEDFPGTQRYSGKNEFS 88
>SB_16814| Best HMM Match : HNF-1A_C (HMM E-Value=2.9)
Length = 183
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 190 CSGICDTTSCRTSGALNDRLDVNLRWLSCLQHEDHHCSSLLVGRPESS 333
CSG C T C G ND ++ + SC ++ED + G+ E S
Sbjct: 49 CSGPCKTFYCPYIGQRNDGDSIS-HYCSCAENEDFPGTQRYSGKNEFS 95
>SB_39908| Best HMM Match : Prismane (HMM E-Value=3)
Length = 456
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 368 IFTGGIRIDTSAVTVHPNWNTN 433
++TG + IDTS + V WN+N
Sbjct: 79 LYTGPVLIDTSMMVVRIQWNSN 100
>SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 897
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 193 SGIC-DTTSCRTSGALNDRLDVNLRWL 270
SG+ D CR SG L D +D L W+
Sbjct: 138 SGVLYDAIDCRLSGVLYDAIDCRLSWV 164
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,752,438
Number of Sequences: 59808
Number of extensions: 514197
Number of successful extensions: 1264
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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