Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10k03f
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 52 3e-07
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 45 4e-05
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 40 0.001
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 36 0.024
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 31 0.92
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 29 2.8
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 3.7
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 3.7
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 28 4.9
AC024865-1|AAF60878.1| 157|Caenorhabditis elegans Hypothetical ... 28 4.9
Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical pr... 28 6.5
U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork head/HNF-3... 28 6.5
AC006695-8|AAF39976.1| 351|Caenorhabditis elegans Hypothetical ... 27 8.6
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 52.0 bits (119), Expect = 3e-07
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Frame = +2
Query: 167 RIIGGSQVAAASVIPHH-VGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQF 343
R+IGGS+ + PH V LL+ CGGSL+ ++TAAHC+ +
Sbjct: 57 RLIGGSESS-----PHSWPWTVQLLSRLGHHRCGGSLIDPNFVLTAAHCFAKDRRPTSYS 111
Query: 344 TAVLGSTTIFTGGIRIDTSAVTVHPNWNTN-DYTHDIAVIRI-TSVAYSNNVQAIPLPSA 517
V G + G +AV++HP +N ++D A++RI V S + I LPS
Sbjct: 112 VRVGGHRS--GSGSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLPSL 169
Query: 518 SDVNRDFVGLTG---TISGYGKTSGA--QTSIPLTSVLYQTSVP 634
V +TG TI G ++ + +PL S L+ +S+P
Sbjct: 170 PAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLP 213
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 45.2 bits (102), Expect = 4e-05
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 5/169 (2%)
Frame = +2
Query: 149 KRLESSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQS 328
K + S RIIGG+ + + LV+ G +CG +++ + ++TAAHC Q
Sbjct: 31 KPIFSFRIIGGNSIDDGA--NWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCAL--QL 86
Query: 329 QAKQFTAVLGSTTIFTGGIRIDTSAVTVHPNWNTNDYTHDIAVIRITSVAYSNNVQAIPL 508
Q + F V + +H +N +DIA++RI+S ++ + L
Sbjct: 87 QTRSFVYVREPKNNRERSFSV--KEAYIHSGYNNQTADNDIALLRISSDLSKLGIKPVCL 144
Query: 509 -PSASDVNRDFVGLTGTISGYGKTSGAQTS----IPLTSVLYQTSVPVI 640
S + + + G + GYG T G +S + + L TSVP+I
Sbjct: 145 VHDDSKLLKQY--KNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPII 191
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 40.3 bits (90), Expect = 0.001
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 8/160 (5%)
Frame = +2
Query: 116 LRFGVPKAYELKRLESSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRII 295
LR+ A + + +R++GG + + P L T CG S++ T +I
Sbjct: 9 LRYVEVNARDAAKSRIARVVGGFETVPGA-FPWTAALRNKATKAHH--CGASILDKTHLI 65
Query: 296 TAAHCWWDGQSQAKQFTAVLG--STTIFTGGIRI-DTSAVTVHPNWNTNDYTHDIAVIRI 466
TAAHC ++ + + V+G G +I + +P + + ++HDIA++ I
Sbjct: 66 TAAHC-FEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLYK-DIFSHDIAILEI 123
Query: 467 --TSVAYSNNVQAIPLPSASDVNRDFVGLTG---TISGYG 571
+ ++ Q I LPS +DFV G +SG+G
Sbjct: 124 PYPGIEFNEYAQPICLPS-----KDFVYTPGRQCVVSGWG 158
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 35.9 bits (79), Expect = 0.024
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Frame = +2
Query: 245 GWMSICGGSLVSNTRIITAAHCWWDGQSQAKQFTAVLGSTTI---FTGGIRIDTSAVTVH 415
G ++CGG L++ + +IT+AHC + G A LG + G + A+ +
Sbjct: 41 GTTNVCGGVLIAPSIVITSAHCVFSGDDFAVTAKVTLGDVHLNKHDDGEQEFRSHAMAIS 100
Query: 416 PNW--NTNDYTHDIAVIRI---TSVAYSN-NVQAIPLPSASDVN 529
+ + ++ D+AVI + V +S ++Q LPS VN
Sbjct: 101 KKFFNDASEANDDVAVIFLPQRADVCHSPLSLQIAKLPSTGSVN 144
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.92
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 257 ICGGSLVSNTRIITAAHCW 313
ICGG+L++ ++TAAHC+
Sbjct: 61 ICGGTLITLKHVLTAAHCF 79
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 29.1 bits (62), Expect = 2.8
Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Frame = +2
Query: 320 GQSQAKQFTAVLGST-TIFTGGIRIDTSAVT---VHPNWNTNDYTHDIAVIRITSVAYSN 487
G S A T+ ST T T + S VT + +T T + I S S
Sbjct: 529 GSSTATAGTSPQASTVTTVTDISTVSGSTVTSQTAESSLSTESPTSAGSSISTVSTVSSQ 588
Query: 488 NVQAIPLPSASDVNRDFVGLTGTISGYGKT--SGAQTSIPLT 607
IP+ SAS + G TG+ + G T SG+ TS P T
Sbjct: 589 PSTYIPVSSASSIYSTLSGSTGSTASPGTTESSGSSTSGPST 630
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 2/112 (1%)
Frame = +2
Query: 161 SSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRI-ITAAHCWWDGQSQAK 337
+S +G ++ ++ H++ + + ++ GGS NT I G Q
Sbjct: 2097 TSTELGENESNGQLILDHYINITTMERIVTITCYGGSATDNTTISFNGGSRTMSGTGQIV 2156
Query: 338 QFTAVLGSTTIFTGGIRIDTSA-VTVHPNWNTNDYTHDIAVIRITSVAYSNN 490
S GI ++T A + V P +T T +A I TS S N
Sbjct: 2157 LTMTCSSSGQWMRNGIGVETVACIVVTPPGSTIPLTTTMATIPTTSAGSSPN 2208
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 2/112 (1%)
Frame = +2
Query: 161 SSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRI-ITAAHCWWDGQSQAK 337
+S +G ++ ++ H++ + + ++ GGS NT I G Q
Sbjct: 2097 TSTELGENESNGQLILDHYINITTMERIVTITCYGGSATDNTTISFNGGSRTMSGTGQIV 2156
Query: 338 QFTAVLGSTTIFTGGIRIDTSA-VTVHPNWNTNDYTHDIAVIRITSVAYSNN 490
S GI ++T A + V P +T T +A I TS S N
Sbjct: 2157 LTMTCSSSGQWMRNGIGVETVACIVVTPPGSTIPLTTTMATIPTTSAGSSPN 2208
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 2/112 (1%)
Frame = +2
Query: 161 SSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRI-ITAAHCWWDGQSQAK 337
+S +G ++ ++ H++ + + ++ GGS NT I G Q
Sbjct: 2097 TSTELGENESNGQLILDHYINITTMERIVTITCYGGSATDNTTISFNGGSRTMSGTGQIV 2156
Query: 338 QFTAVLGSTTIFTGGIRIDTSA-VTVHPNWNTNDYTHDIAVIRITSVAYSNN 490
S GI ++T A + V P +T T +A I TS S N
Sbjct: 2157 LTMTCSSSGQWMRNGIGVETVACIVVTPPGSTIPLTTTMATIPTTSAGSSPN 2208
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 2/112 (1%)
Frame = +2
Query: 161 SSRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRI-ITAAHCWWDGQSQAK 337
+S +G ++ ++ H++ + + ++ GGS NT I G Q
Sbjct: 2097 TSTELGENESNGQLILDHYINITTMERIVTITCYGGSATDNTTISFNGGSRTMSGTGQIV 2156
Query: 338 QFTAVLGSTTIFTGGIRIDTSA-VTVHPNWNTNDYTHDIAVIRITSVAYSNN 490
S GI ++T A + V P +T T +A I TS S N
Sbjct: 2157 LTMTCSSSGQWMRNGIGVETVACIVVTPPGSTIPLTTTMATIPTTSAGSSPN 2208
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 248 WMSICGGSLVSNTRIITAAHC 310
W C G+L S I+TA HC
Sbjct: 71 WSKHCSGTLTSPRHILTATHC 91
>AC024865-1|AAF60878.1| 157|Caenorhabditis elegans Hypothetical
protein Y74C10AL.2 protein.
Length = 157
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 305 HCWWDGQSQAKQFTAVLGSTTIFTGG-IRIDTSAVTVHPNWNTNDY 439
+C +D + + +V+ + F G + IDT+AVT NW TN Y
Sbjct: 11 NCSFDLEGRRNAVASVVSAALFFIGWWLMIDTAAVTNKENW-TNVY 55
>Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical
protein F38A6.1c protein.
Length = 411
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 243 PVGCQSAVALLSPTRGSSLQLTAGGTARVKRSSSQQYSAPRLYSLGGSGLTPQ 401
P G SAV PT S T G T + + + + QY++P LYS + + PQ
Sbjct: 318 PSGTPSAVNHSQPTSVISSVGTLG-TTQAQMTLNGQYASPYLYSSDFATILPQ 369
>Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical
protein F38A6.1b protein.
Length = 442
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 243 PVGCQSAVALLSPTRGSSLQLTAGGTARVKRSSSQQYSAPRLYSLGGSGLTPQ 401
P G SAV PT S T G T + + + + QY++P LYS + + PQ
Sbjct: 349 PSGTPSAVNHSQPTSVISSVGTLG-TTQAQMTLNGQYASPYLYSSDFATILPQ 400
>Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical
protein F38A6.1a protein.
Length = 506
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 243 PVGCQSAVALLSPTRGSSLQLTAGGTARVKRSSSQQYSAPRLYSLGGSGLTPQ 401
P G SAV PT S T G T + + + + QY++P LYS + + PQ
Sbjct: 413 PSGTPSAVNHSQPTSVISSVGTLG-TTQAQMTLNGQYASPYLYSSDFATILPQ 464
>U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork
head/HNF-3-like protein protein.
Length = 506
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 243 PVGCQSAVALLSPTRGSSLQLTAGGTARVKRSSSQQYSAPRLYSLGGSGLTPQ 401
P G SAV PT S T G T + + + + QY++P LYS + + PQ
Sbjct: 413 PSGTPSAVNHSQPTSVISSVGTLG-TTQAQMTLNGQYASPYLYSSDFATILPQ 464
>AC006695-8|AAF39976.1| 351|Caenorhabditis elegans Hypothetical
protein W06H8.4 protein.
Length = 351
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = +1
Query: 4 FDFCEFGQNALFCLIHTDMCSYICEWVCFQWTCIR 108
F +C + L D C YIC W+ C R
Sbjct: 188 FAYCSNVSKTIAYLGVVDSCGYICAWIVDGGVCFR 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,611,319
Number of Sequences: 27780
Number of extensions: 375824
Number of successful extensions: 1053
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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