Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k03f
         (640 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    42   7e-06
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           26   0.27 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    24   1.4  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    24   1.4  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   1.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   3.3  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   4.4  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   7.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 41.5 bits (93), Expect = 7e-06
 Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
 Frame = +2

Query: 164 SRIIGGSQVAAASVIPHHVGLVALLTTGWMSICGGSLVSNTRIITAAHCWWDGQSQAKQF 343
           SRI+GG+     +  P   G+      G   ICG +++S   ++TAAHC  D      + 
Sbjct: 159 SRIVGGTNTGI-NEFPMMAGIKRTYEPGM--ICGATIISKRYVLTAAHCIID--ENTTKL 213

Query: 344 TAVLG-----STTIFTGGIRIDTSAVTVHPNWN---TNDY-THDIAVIRI-TSVAYSNNV 493
             V+G     S T     +    + V +HP ++    +D+  +DIA+++    + + + V
Sbjct: 214 AIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKV 273

Query: 494 QAIPLPSASDVNRDFVGLTGTISGYGKTS 580
               LP    ++  F G   T+ G+G TS
Sbjct: 274 GPACLPFQHFLD-SFAGSDVTVLGWGHTS 301


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 422 WNTNDYTHDIAVIRITSVAYSNNVQAIPLPSASDVNRDFVGLT 550
           W+T DYT+D    R +++   + +    LP   +V RD V +T
Sbjct: 160 WSTIDYTYDSIEARDSAIFDGDFITENNLPLGLEVWRDKVFIT 202


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -2

Query: 207 ITDAAATWLPPIILLDSKRFNSYALGTPNL 118
           +TDA+  W+P +   + K  + + +  PN+
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNV 138


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -2

Query: 207 ITDAAATWLPPIILLDSKRFNSYALGTPNL 118
           +TDA+  W+P +   + K  + + +  PN+
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNV 138


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 166 TGLQTLQLICFGHS 125
           TG+QTLQ IC G +
Sbjct: 24  TGIQTLQPICVGET 37


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/63 (22%), Positives = 28/63 (44%)
 Frame = +2

Query: 29  MRYSVLFILTCAVIFANGYAFNGPAYGYHLRFGVPKAYELKRLESSRIIGGSQVAAASVI 208
           M Y+VL +++     +N    + P +G H+  G    + L +     ++  S +    V+
Sbjct: 612 MPYNVLVVVS-PFDDSNVVQIDSPVWGRHIYDGRAMGFPLDKPVDPLLLVLSNIHVKEVL 670

Query: 209 PHH 217
            HH
Sbjct: 671 VHH 673


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/63 (22%), Positives = 28/63 (44%)
 Frame = +2

Query: 29  MRYSVLFILTCAVIFANGYAFNGPAYGYHLRFGVPKAYELKRLESSRIIGGSQVAAASVI 208
           M Y+VL +++     +N    + P +G H+  G    + L +     ++  S +    V+
Sbjct: 612 MPYNVLVVVS-PFDDSNVVQIDSPVWGRHIYDGRAMGFPLDKPVDPLLLVLSNIHVKEVL 670

Query: 209 PHH 217
            HH
Sbjct: 671 VHH 673


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
 Frame = -1

Query: 466 DPYHGNIMGVIVSVPIRVDSYS*GVNPDPPSEYSRGAEYCCE--LLRLTLAVPPAVSCSD 293
           DPY  NI G   +VP R+  +      + P +     EYC +   ++  L+V   +   +
Sbjct: 90  DPYRCNICGKTFAVPARLTRHYRTHTGEKPYQ----CEYCSKSFSVKENLSVHRRIHTKE 145

Query: 292 DPRVGDKRATAD*HPTGR*ERH*SYMMWYHRCRCNLASSNNPTGLQTLQLI 140
            P   D    A  H +G+  RH          +C + S    T +Q+ QL+
Sbjct: 146 RPYKCDVCERAFEH-SGKLHRHMRIHTGERPHKCTVCSK---TFIQSGQLV 192


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 357 APRLYSLGGSGLTPQ 401
           +P++YS GG  +TP+
Sbjct: 144 SPQMYSSGGEEITPR 158


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 170 SYWTPNASTHMLWALRTSNDNRMQVH 93
           ++W+   ST +LW +      RM +H
Sbjct: 394 AFWSFIVSTILLWFINKIIPIRMSIH 419


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 559 YGASQPYEVAVDIAGRWQWNRLNI 488
           +GA   +  A    GR QW++L +
Sbjct: 114 FGAKLAWRNATRCIGRIQWSKLQV 137


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,388
Number of Sequences: 438
Number of extensions: 4563
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)