Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k02r
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    27   0.44 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   3.1  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   7.2  

>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 27.5 bits (58), Expect = 0.44
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +3

Query: 339 RNRQGGGTYPCRLARGPTTSKCEERPTTLLNMNISFRFSLLKN 467
           RN  GG   P    R  T  +C++R      MN+ F  S+LKN
Sbjct: 377 RNTLGGAQTPNAAQRRSTGFRCQQRWDP--KMNLRFCMSILKN 417


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 466 FLSRLNLNEIFILSSVVGRSSHLL 395
           FL  LNL+E++ L+ V   S+H L
Sbjct: 193 FLDVLNLHELYQLNGVHNHSNHYL 216


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +1

Query: 322  HDCFTAEIGRVVVPTRADSQEVLP-PVN 402
            H  F AEIG  +V    DS E+LP P N
Sbjct: 939  HIEFHAEIGMSLVLKVGDSSEMLPAPAN 966


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,493
Number of Sequences: 2352
Number of extensions: 16169
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)