Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k02r
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D31815-1|BAA06602.1|  299|Homo sapiens SMP-30 protein.                 44   4e-04
BC073173-1|AAH73173.1|  299|Homo sapiens regucalcin (senescence ...    44   4e-04
BC050371-1|AAH50371.1|  227|Homo sapiens RGN protein protein.          44   4e-04
AL513366-1|CAI41697.1|  299|Homo sapiens regucalcin (senescence ...    44   4e-04
AK223360-1|BAD97080.1|  299|Homo sapiens regucalcin variant prot...    44   4e-04
AB032064-1|BAA84082.1|  299|Homo sapiens regucalcin protein.           44   4e-04
AB028125-1|BAA78693.1|  299|Homo sapiens regucalcin protein.           44   4e-04

>D31815-1|BAA06602.1|  299|Homo sapiens SMP-30 protein.
          Length = 299

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 720 GKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEEQL---PPCGSTFRLDGLEVKG 550
           GK LQ + +P  + TS  FGG +  ++YVT A      E L   P  G  F++ GL VKG
Sbjct: 232 GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPEGLLRQPEAGGIFKITGLGVKG 291


>BC073173-1|AAH73173.1|  299|Homo sapiens regucalcin (senescence
           marker protein-30) protein.
          Length = 299

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 720 GKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEEQL---PPCGSTFRLDGLEVKG 550
           GK LQ + +P  + TS  FGG +  ++YVT A      E L   P  G  F++ GL VKG
Sbjct: 232 GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPEGLLRQPEAGGIFKITGLGVKG 291


>BC050371-1|AAH50371.1|  227|Homo sapiens RGN protein protein.
          Length = 227

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 720 GKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEEQL---PPCGSTFRLDGLEVKG 550
           GK LQ + +P  + TS  FGG +  ++YVT A      E L   P  G  F++ GL VKG
Sbjct: 160 GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPEGLLRQPEAGGIFKITGLGVKG 219


>AL513366-1|CAI41697.1|  299|Homo sapiens regucalcin (senescence
           marker protein-30) protein.
          Length = 299

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 720 GKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEEQL---PPCGSTFRLDGLEVKG 550
           GK LQ + +P  + TS  FGG +  ++YVT A      E L   P  G  F++ GL VKG
Sbjct: 232 GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPEGLLRQPEAGGIFKITGLGVKG 291


>AK223360-1|BAD97080.1|  299|Homo sapiens regucalcin variant
           protein.
          Length = 299

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 720 GKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEEQL---PPCGSTFRLDGLEVKG 550
           GK LQ + +P  + TS  FGG +  ++YVT A      E L   P  G  F++ GL VKG
Sbjct: 232 GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPEGLLRQPEAGGIFKITGLGVKG 291


>AB032064-1|BAA84082.1|  299|Homo sapiens regucalcin protein.
          Length = 299

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 720 GKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEEQL---PPCGSTFRLDGLEVKG 550
           GK LQ + +P  + TS  FGG +  ++YVT A      E L   P  G  F++ GL VKG
Sbjct: 232 GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPEGLLRQPEAGGIFKITGLGVKG 291


>AB028125-1|BAA78693.1|  299|Homo sapiens regucalcin protein.
          Length = 299

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 720 GKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEEQL---PPCGSTFRLDGLEVKG 550
           GK LQ + +P  + TS  FGG +  ++YVT A      E L   P  G  F++ GL VKG
Sbjct: 232 GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPEGLLRQPEAGGIFKITGLGVKG 291


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,243,470
Number of Sequences: 237096
Number of extensions: 2349963
Number of successful extensions: 10122
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10122
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)