Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10k02f
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    27   0.39 
AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    26   1.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   1.6  
U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    24   3.7  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           24   3.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   6.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.4  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   8.4  

>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 13/56 (23%), Positives = 27/56 (48%)
 Frame = -3

Query: 347 VLTSLAVWSSPVHCISTTSLSRPTTKWCFFPSMGIMKVGFPSSLDLVCFPVSGTYL 180
           ++    V  +P+H ++T  L  PT  + +  S GI  V   + +   C P++  ++
Sbjct: 471 IIVEFFVCWAPLHILNTVYLYSPTFVYQYVNSSGIALVQLMAYISSCCNPITYCFM 526


>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 385 FNDAKADPRGRLFAGTMGHEY 447
           FNDAKADP         GHE+
Sbjct: 110 FNDAKADPLSAHLFALEGHEW 130


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 405 PQG-QAVCRNDGSRIRTGKVRPEEGVSVPHRPG 500
           PQG + +   DG +   G++ P+ G  VP RPG
Sbjct: 424 PQGPKGMDGFDGEKGERGQMGPKGGQGVPGRPG 456


>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 463 DLKKGSLYRIDPDGSVHRLESNIDISNG 546
           D+ +GS   +DPDG+   ++   D  NG
Sbjct: 47  DVVQGSYSVVDPDGTKRTVDYTADPHNG 74


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 486 PHRPGRLRAPPRVQHRH 536
           P RP R+R  PR + RH
Sbjct: 165 PARPYRVRRAPRAERRH 181


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 146 RACSLWSQCGPSPSHTGSVTA 84
           +AC LW  CG +   T + T+
Sbjct: 553 KACPLWPLCGSASRQTQTFTS 573


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -3

Query: 233 GFPSSLDLVCFPVSGTYLCMVSSKMLTKYRACSLWSQCGPSPSH 102
           G P+S+ + C  V   +L  + +  L+     +LW  C   P H
Sbjct: 492 GIPASVLINCKDVLAPHLAKIFNLSLSLGVFPALWKSCWLFPVH 535


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 53  EPNLIWRRSYKL*RSRCGSARAHTGTTTSRPYT 151
           +P ++WR    L  +  GS + H G T    Y+
Sbjct: 114 DPTIVWRPDVVLYNNAGGSDQHHYGDTNVLVYS 146


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,778
Number of Sequences: 2352
Number of extensions: 13730
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)