Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10j24f
(634 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P06754 Cluster: Tropomyosin-1, isoforms 9A/A/B; n=38; B... 121 1e-26
UniRef50_P49455 Cluster: Tropomyosin-1, isoforms 33/34; n=219; B... 67 4e-10
UniRef50_P42638 Cluster: Tropomyosin-2; n=3; Schistosoma|Rep: Tr... 62 1e-08
UniRef50_Q59GR8 Cluster: TPM1 protein variant; n=78; Euteleostom... 57 4e-07
UniRef50_P09493 Cluster: Tropomyosin alpha-1 chain; n=305; Chord... 56 5e-07
UniRef50_UPI00005A4F4C Cluster: PREDICTED: similar to tropomyosi... 53 7e-06
UniRef50_Q6S5G5 Cluster: Tropomyosin; n=1; Nematostella vectensi... 52 1e-05
UniRef50_Q8MUK6 Cluster: MA; n=5; Schistosoma japonicum|Rep: MA ... 50 6e-05
UniRef50_Q5C3A9 Cluster: SJCHGC02288 protein; n=1; Schistosoma j... 50 6e-05
UniRef50_Q4T5C6 Cluster: Chromosome undetermined SCAF9326, whole... 46 6e-04
UniRef50_P09491 Cluster: Tropomyosin-2; n=15; Endopterygota|Rep:... 46 6e-04
UniRef50_Q0ZDL9 Cluster: Tropomyosin 3; n=1; Nematostella vecten... 37 0.46
UniRef50_Q2UGF1 Cluster: Predicted protein; n=6; Eurotiomycetida... 37 0.46
UniRef50_Q4SWE0 Cluster: Chromosome undetermined SCAF13628, whol... 36 0.81
UniRef50_Q4SE75 Cluster: Chromosome undetermined SCAF14625, whol... 35 1.4
UniRef50_Q0SJ03 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5
UniRef50_A0R2K9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5
UniRef50_UPI0000E23FD7 Cluster: PREDICTED: hypothetical protein;... 33 4.3
UniRef50_Q9E937 Cluster: R-SORF1 protein; n=2; Gallid herpesviru... 33 5.7
UniRef50_Q7X8D5 Cluster: OSJNBa0079A21.20 protein; n=2; Oryza sa... 33 5.7
UniRef50_A0NCE0 Cluster: ENSANGP00000031309; n=1; Anopheles gamb... 33 5.7
UniRef50_UPI0000E805BF Cluster: PREDICTED: hypothetical protein;... 33 7.5
UniRef50_A4FTT8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q7R717 Cluster: Putative uncharacterized protein PY0777... 33 7.5
UniRef50_UPI0000DA4855 Cluster: PREDICTED: hypothetical protein;... 32 10.0
UniRef50_Q6SYA9 Cluster: Prodynorphin; n=2; Anguilla rostrata|Re... 32 10.0
UniRef50_Q0D494 Cluster: Os07g0639500 protein; n=3; Oryza sativa... 32 10.0
UniRef50_Q4J9G4 Cluster: Conserved periplasmic binding protein; ... 32 10.0
UniRef50_P11047 Cluster: Laminin subunit gamma-1 precursor; n=39... 32 10.0
>UniRef50_P06754 Cluster: Tropomyosin-1, isoforms 9A/A/B; n=38;
Bilateria|Rep: Tropomyosin-1, isoforms 9A/A/B -
Drosophila melanogaster (Fruit fly)
Length = 339
Score = 121 bits (292), Expect = 1e-26
Identities = 65/106 (61%), Positives = 74/106 (69%)
Frame = +2
Query: 314 QK*IKMTTNMQQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAA 493
+K KMTT++ QGT+LDVLKKKMRQT +HKRLQ+E++RREEAESEVAA
Sbjct: 82 KKTTKMTTSIPQGTLLDVLKKKMRQTKEEMEKYKDECEEFHKRLQLEVVRREEAESEVAA 141
Query: 494 LNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENR 631
LNRRIQ +ATAKLSEASQAADESER RK LENR
Sbjct: 142 LNRRIQLLEEDLERSEERLGSATAKLSEASQAADESERARKILENR 187
>UniRef50_P49455 Cluster: Tropomyosin-1, isoforms 33/34; n=219;
Bilateria|Rep: Tropomyosin-1, isoforms 33/34 -
Drosophila melanogaster (Fruit fly)
Length = 518
Score = 66.9 bits (156), Expect = 4e-10
Identities = 40/88 (45%), Positives = 48/88 (54%)
Frame = +2
Query: 368 LKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXX 547
L+KK++ +L+ + + AESEVAALNRRIQ
Sbjct: 46 LQKKIQTVENELDQTQEALTLVTGKLEEKNKALQNAESEVAALNRRIQLLEEDLERSEER 105
Query: 548 XATATAKLSEASQAADESERIRKALENR 631
+ATAKLSEASQAADESER RK LENR
Sbjct: 106 LGSATAKLSEASQAADESERARKILENR 133
>UniRef50_P42638 Cluster: Tropomyosin-2; n=3; Schistosoma|Rep:
Tropomyosin-2 - Schistosoma mansoni (Blood fluke)
Length = 284
Score = 62.1 bits (144), Expect = 1e-08
Identities = 40/109 (36%), Positives = 58/109 (53%)
Frame = +2
Query: 308 LTQK*IKMTTNMQQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEV 487
L +K ++M T ++ + +VLKK ++Q + +L+ R EAE+EV
Sbjct: 29 LREKELEMQTKDEE--VAEVLKK-IQQVDTDKETAQTQLAETNTKLEETDKRATEAEAEV 85
Query: 488 AALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRT 634
A+L +RI+ AT KL EAS+AADES+R RK LENRT
Sbjct: 86 ASLQKRIRQLEDELESTETRLQEATVKLEEASKAADESDRGRKVLENRT 134
>UniRef50_Q59GR8 Cluster: TPM1 protein variant; n=78;
Euteleostomi|Rep: TPM1 protein variant - Homo sapiens
(Human)
Length = 303
Score = 56.8 bits (131), Expect = 4e-07
Identities = 34/97 (35%), Positives = 47/97 (48%)
Frame = +2
Query: 341 MQQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXX 520
M + L+ +++K+R + L E RE AE++VA+LNRRIQ
Sbjct: 59 MAGSSSLEAVRRKIRSLQEQADAAEERAGTLQRELDHERKLRETAEADVASLNRRIQLVE 118
Query: 521 XXXXXXXXXXATATAKLSEASQAADESERIRKALENR 631
ATA KL EA +AAD SER K +E+R
Sbjct: 119 EELDRAQERLATALQKLEEAEKAADGSERGMKVIESR 155
>UniRef50_P09493 Cluster: Tropomyosin alpha-1 chain; n=305;
Chordata|Rep: Tropomyosin alpha-1 chain - Homo sapiens
(Human)
Length = 284
Score = 56.4 bits (130), Expect = 5e-07
Identities = 32/88 (36%), Positives = 47/88 (53%)
Frame = +2
Query: 368 LKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXX 547
L+KK++ T ++L++ + +AE++VA+LNRRIQ
Sbjct: 46 LQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQER 105
Query: 548 XATATAKLSEASQAADESERIRKALENR 631
ATA KL EA +AADESER K +E+R
Sbjct: 106 LATALQKLEEAEKAADESERGMKVIESR 133
>UniRef50_UPI00005A4F4C Cluster: PREDICTED: similar to tropomyosin 3
isoform 2; n=2; Eutheria|Rep: PREDICTED: similar to
tropomyosin 3 isoform 2 - Canis familiaris
Length = 215
Score = 52.8 bits (121), Expect = 7e-06
Identities = 29/54 (53%), Positives = 33/54 (61%)
Frame = +2
Query: 470 EAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENR 631
EAE+E A+LNRRIQ ATA KL EA +AADESER K +ENR
Sbjct: 67 EAEAEAASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGVKVIENR 120
>UniRef50_Q6S5G5 Cluster: Tropomyosin; n=1; Nematostella
vectensis|Rep: Tropomyosin - Nematostella vectensis
Length = 242
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/91 (32%), Positives = 42/91 (46%)
Frame = +2
Query: 359 LDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXX 538
++ +KKKM L+ R + AE+EVAAL +++Q
Sbjct: 1 METIKKKMATLRQTLEDAEARAAKAEDELKNANDRADSAETEVAALTKQLQQLEDDLDAA 60
Query: 539 XXXXATATAKLSEASQAADESERIRKALENR 631
A +L+EA + ADESER RK LENR
Sbjct: 61 ESKLADTQGQLTEAEKQADESERARKVLENR 91
>UniRef50_Q8MUK6 Cluster: MA; n=5; Schistosoma japonicum|Rep: MA -
Schistosoma japonicum (Blood fluke)
Length = 249
Score = 49.6 bits (113), Expect = 6e-05
Identities = 28/92 (30%), Positives = 46/92 (50%)
Frame = +2
Query: 356 ILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXX 535
+ +V+KKK+++ + L+ E RE+AE+EVAA+ RRI+
Sbjct: 7 VANVVKKKIKELQTELEKLQFDVIAEDETLKHETGLREKAEAEVAAMTRRIRLLEEDLEV 66
Query: 536 XXXXXATATAKLSEASQAADESERIRKALENR 631
KL EAS+ A+ESER + ++N+
Sbjct: 67 SSSRLTETLTKLEEASKTAEESERTWRQVQNK 98
>UniRef50_Q5C3A9 Cluster: SJCHGC02288 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02288 protein - Schistosoma
japonicum (Blood fluke)
Length = 211
Score = 49.6 bits (113), Expect = 6e-05
Identities = 30/92 (32%), Positives = 44/92 (47%)
Frame = +2
Query: 356 ILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXX 535
++ +K KM+ L+ E + +AE+EVA+L +RI+
Sbjct: 5 VIGAVKSKMQGMKLQIDQLKQEVSSKQAVLRKEEENKTKAEAEVASLQKRIRQLEDELES 64
Query: 536 XXXXXATATAKLSEASQAADESERIRKALENR 631
AT KL EAS+AADES+R R+ LE R
Sbjct: 65 TETRLQEATLKLEEASKAADESDRARRVLEAR 96
>UniRef50_Q4T5C6 Cluster: Chromosome undetermined SCAF9326, whole
genome shotgun sequence; n=3; Clupeocephala|Rep:
Chromosome undetermined SCAF9326, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 46
Score = 46.4 bits (105), Expect = 6e-04
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +2
Query: 470 EAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESER 607
+AE+EVA+LNRRIQ ATA KL EA +AADESER
Sbjct: 1 QAEAEVASLNRRIQLVEEELDRAQERLATALHKLEEAEKAADESER 46
>UniRef50_P09491 Cluster: Tropomyosin-2; n=15; Endopterygota|Rep:
Tropomyosin-2 - Drosophila melanogaster (Fruit fly)
Length = 284
Score = 46.4 bits (105), Expect = 6e-04
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +2
Query: 476 ESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRT 634
ESEVA NR++Q TA KL EA+Q+ADE+ R+ K LENR+
Sbjct: 82 ESEVATQNRKVQQIEEDLEKSEERSTTAQQKLLEATQSADENNRMCKVLENRS 134
>UniRef50_Q0ZDL9 Cluster: Tropomyosin 3; n=1; Nematostella
vectensis|Rep: Tropomyosin 3 - Nematostella vectensis
Length = 245
Score = 36.7 bits (81), Expect = 0.46
Identities = 26/91 (28%), Positives = 36/91 (39%)
Frame = +2
Query: 359 LDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXX 538
+DVLKKK+ QT K L++ R AE E L RI+
Sbjct: 1 MDVLKKKVVQTRQEIEKAENKERYIRKLLRLTSERATLAEMEADGLKNRIKEMEKQIERV 60
Query: 539 XXXXATATAKLSEASQAADESERIRKALENR 631
L+ AD+SE+ RKA+E +
Sbjct: 61 NARTERLGQGLTAKESEADDSEKDRKAMEGK 91
>UniRef50_Q2UGF1 Cluster: Predicted protein; n=6;
Eurotiomycetidae|Rep: Predicted protein - Aspergillus
oryzae
Length = 652
Score = 36.7 bits (81), Expect = 0.46
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -3
Query: 617 PCVFARIHRRPGWPRTA-WRWRSRDAPRTSRGPPPAVGYVGSGQPLRT 477
P V+ RRP W T W D PR++ PP +G +G G LRT
Sbjct: 220 PVVYTFFLRRPAWSFTMYWAKLFWDFPRSAAAPPGLIGPIGPGLLLRT 267
>UniRef50_Q4SWE0 Cluster: Chromosome undetermined SCAF13628, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13628, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1129
Score = 35.9 bits (79), Expect = 0.81
Identities = 24/92 (26%), Positives = 36/92 (39%)
Frame = +2
Query: 335 TNMQQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQX 514
T M T +D +KKK++ K ++ E +EEAE EV L R+Q
Sbjct: 888 TMMSGPTSVDAVKKKIKVLQEQAEEAVERAERLQKEVEKERKAKEEAEMEVCTLCNRLQN 947
Query: 515 XXXXXXXXXXXXATATAKLSEASQAADESERI 610
A + E + ADE +R+
Sbjct: 948 QEDVLERTQQDLEKACRQQLEFEKVADERQRL 979
>UniRef50_Q4SE75 Cluster: Chromosome undetermined SCAF14625, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF14625, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 2835
Score = 35.1 bits (77), Expect = 1.4
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 593 RRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSG 492
R P P T+W RS + R+S GPPP G G
Sbjct: 1991 RTPQHPSTSWSERSENQTRSSEGPPPGSSSTGVG 2024
>UniRef50_Q0SJ03 Cluster: Putative uncharacterized protein; n=1;
Rhodococcus sp. RHA1|Rep: Putative uncharacterized
protein - Rhodococcus sp. (strain RHA1)
Length = 201
Score = 34.3 bits (75), Expect = 2.5
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +1
Query: 421 VRGVPQTVASGNYAKRRS*VRSGCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 594
VR V +VA+ +++RR G P T GP RG R HR A RG+PGRR
Sbjct: 9 VRVVGNSVAANRHSRRRCPDVRGPPRRLPGTVLDGPTR-RGCGRRGHR-ADRGEPGRR 64
>UniRef50_A0R2K9 Cluster: Putative uncharacterized protein; n=1;
Mycobacterium smegmatis str. MC2 155|Rep: Putative
uncharacterized protein - Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155)
Length = 229
Score = 34.3 bits (75), Expect = 2.5
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = +1
Query: 481 RSGCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPH 633
R+G P+P AG G GA RDRHR RG PGR+ R + G H
Sbjct: 103 RAGNPDPA---AGAGHSARHGACRDRHR--ARGHPGRQ-RRGLARAVGRGH 147
>UniRef50_UPI0000E23FD7 Cluster: PREDICTED: hypothetical protein;
n=2; Catarrhini|Rep: PREDICTED: hypothetical protein -
Pan troglodytes
Length = 290
Score = 33.5 bits (73), Expect = 4.3
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +1
Query: 397 GNGKI*GRVRGVPQTVASGNYAKRRS*VRSGCPEPTYPTAGGGPREVRGASRDRHRQA 570
G GK R+ G +T+A +++ RRS S CPE T+ A GP R R ++ A
Sbjct: 218 GGGKPGRRLLGPSRTLAQASFSPRRS--PSRCPEATFLPAAAGPALGRVPWRQAYQAA 273
>UniRef50_Q9E937 Cluster: R-SORF1 protein; n=2; Gallid herpesvirus
3|Rep: R-SORF1 protein - Gallid herpesvirus 3 (Marek's
disease virus type 2)
Length = 359
Score = 33.1 bits (72), Expect = 5.7
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -3
Query: 578 PRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLRTQLLLFA*FPLATVCGTP--RTRP 414
P WR R P + PPP G+ GS + R + L F L VCG RTRP
Sbjct: 215 PSPLWRSAGRKDPAFAAAPPPRTGH-GSSRRCRRAVFLLRNF-LYRVCGRTLRRTRP 269
>UniRef50_Q7X8D5 Cluster: OSJNBa0079A21.20 protein; n=2; Oryza
sativa|Rep: OSJNBa0079A21.20 protein - Oryza sativa
(Rice)
Length = 440
Score = 33.1 bits (72), Expect = 5.7
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 490 CPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAG 624
CP+P+ AGGG R R R R R+AV RR + + G G
Sbjct: 344 CPDPSCSVAGGGERGDRFLRRVRGRKAVLENGHRRPRQGGSSGGG 388
>UniRef50_A0NCE0 Cluster: ENSANGP00000031309; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000031309 - Anopheles gambiae
str. PEST
Length = 123
Score = 33.1 bits (72), Expect = 5.7
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 502 TYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGE 627
T P+ GGG VR +S DR Q + G+R A TQ A +
Sbjct: 34 TIPSGGGGSGLVRASSGDRQEQEMSAGGGKRYQTARTQAASQ 75
>UniRef50_UPI0000E805BF Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 245
Score = 32.7 bits (71), Expect = 7.5
Identities = 20/48 (41%), Positives = 21/48 (43%)
Frame = -3
Query: 629 GSPAPCVFARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQP 486
G PA R H RPG P + SR A R RG P VG G P
Sbjct: 29 GQPAAPSVPRDHFRPGRPSAPLDYNSRQAER-MRGDPAEVGGAGRAGP 75
>UniRef50_A4FTT8 Cluster: Putative uncharacterized protein; n=1;
Monodon baculovirus|Rep: Putative uncharacterized
protein - Monodon baculovirus
Length = 564
Score = 32.7 bits (71), Expect = 7.5
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = -2
Query: 234 SSLLFRIV--EMGSARTQPANKMAATELGRYKNIVTALITGNYVS 106
S+L++ I E G+ + + A K+ TE+ KN+V+ LI GN VS
Sbjct: 97 STLMYEITIPEDGNLKGRDAKKVGTTEIKLLKNMVSQLIKGNSVS 141
>UniRef50_Q7R717 Cluster: Putative uncharacterized protein PY07773;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY07773 - Plasmodium yoelii
yoelii
Length = 160
Score = 32.7 bits (71), Expect = 7.5
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = -3
Query: 629 GSPAPCVFARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGS 495
G+PAP +F R G RT W RSR + R S A G GS
Sbjct: 100 GAPAPTIFLRRPDPAGHRRTRWSARSRKSGRGSCRAAEATGSRGS 144
>UniRef50_UPI0000DA4855 Cluster: PREDICTED: hypothetical protein;
n=5; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 525
Score = 32.3 bits (70), Expect = 10.0
Identities = 21/59 (35%), Positives = 24/59 (40%)
Frame = +1
Query: 415 GRVRGVPQTVASGNYAKRRS*VRSGCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGR 591
G R P T ASG+ RR S Y T G PRE + A R +G P R
Sbjct: 282 GGSRHGPPTAASGSAGSRRGPAESEGAPGRYRTRAGRPREAQKAGWVREPTRGKGTPAR 340
>UniRef50_Q6SYA9 Cluster: Prodynorphin; n=2; Anguilla rostrata|Rep:
Prodynorphin - Anguilla rostrata (American eel)
Length = 253
Score = 32.3 bits (70), Expect = 10.0
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 379 NASNERGNGKI*GRVRGVPQTVASGNYAKR 468
NA NER + ++ G +G PQT+ +GN KR
Sbjct: 74 NALNERNDPELRGPQQGNPQTITTGNVVKR 103
>UniRef50_Q0D494 Cluster: Os07g0639500 protein; n=3; Oryza
sativa|Rep: Os07g0639500 protein - Oryza sativa subsp.
japonica (Rice)
Length = 251
Score = 32.3 bits (70), Expect = 10.0
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -3
Query: 602 RIHRRPGWPRTAWRWRSR--DAPRTSRGPPPA 513
R RRP WP WRWR+ R R PPPA
Sbjct: 134 RPRRRPTWP---WRWRTSCGGGARRRRAPPPA 162
>UniRef50_Q4J9G4 Cluster: Conserved periplasmic binding protein;
n=1; Sulfolobus acidocaldarius|Rep: Conserved
periplasmic binding protein - Sulfolobus acidocaldarius
Length = 331
Score = 32.3 bits (70), Expect = 10.0
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = -2
Query: 369 KTSKIVPCCMFVVILIHFCVK-IECLNANKQRHLRPTRENAN*QPRSSLLFRIVEMGSAR 193
K S ++P + +VIL+ + I N N+ + L T N P RIV + +
Sbjct: 2 KISNLIPIVLIIVILVGISLTLIHINNTNQTQKLSSTNTTNN--PEKP---RIVSLAPSD 56
Query: 192 TQPANKMAATE--LGRYKNIVTALITGNYVSLISPNEPALTIIINLFLMQLI 43
TQ + + +G L T N S+I PN +T +INL + +I
Sbjct: 57 TQILVSLGLGKDIVGMDIYSYQLLQTLNMTSMIPPNVTVITSVINLNITGII 108
>UniRef50_P11047 Cluster: Laminin subunit gamma-1 precursor; n=39;
Euteleostomi|Rep: Laminin subunit gamma-1 precursor -
Homo sapiens (Human)
Length = 1609
Score = 32.3 bits (70), Expect = 10.0
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = +2
Query: 374 KKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAALNRRIQXXXXXXXXXXXXXA 553
KK R T + +R+ EEA ++ A+N+ I
Sbjct: 1354 KKGRDTLQEANDILNNLKDFDRRVNDNKTAAEEALRKIPAINQTITEANEKTREAQQALG 1413
Query: 554 TATAKLSEASQAADESERIRKALE 625
+A A +EA A E+ERI A++
Sbjct: 1414 SAAADATEAKNKAHEAERIASAVQ 1437
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,222,858
Number of Sequences: 1657284
Number of extensions: 10660561
Number of successful extensions: 34885
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 32972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34833
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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