Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10j24f
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   3.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.5  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 502 TYPTAGGGPREVRGASR 552
           T+P+ GGGPR   G  R
Sbjct: 64  THPSIGGGPRFSSGVGR 80


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 502 TYPTAGGGPREVRGASR 552
           T+P+ GGGPR   G  R
Sbjct: 64  THPSIGGGPRFSSGVGR 80


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = -2

Query: 114 YVSLISPNEPALTIIINLFLMQLIFSTTTHSSKSY*LF 1
           YV+++      +TI+  L +  + F++  + +K+Y LF
Sbjct: 141 YVNILIHLSGLVTIVATLTVTIIFFASYQYGTKTYSLF 178


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = -2

Query: 114 YVSLISPNEPALTIIINLFLMQLIFSTTTHSSKSY*LF 1
           YV+++      +TI+  L +  + F++  + +K+Y LF
Sbjct: 141 YVNILIHLSGLVTIVATLTVTIIFFASYQYGTKTYSLF 178


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 481 RSGCPEPTYPTAGGGPREVRGASR 552
           R GC   +  T  GGPR  R A++
Sbjct: 54  RWGCARASSATTMGGPRYGRAAAQ 77


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 336 VVILIHFCVKIECLNANKQRHL 271
           V I + +C+K EC+   K+R +
Sbjct: 55  VPIGVLYCMKCECVPLQKKRRI 76


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 505 YPTAGGGPREVRGASRDRHRQAVRGQ 582
           YP  G    E+RG SR ++ + V  Q
Sbjct: 445 YPLIGAMREELRGISRGKNAKDVDWQ 470


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,789
Number of Sequences: 336
Number of extensions: 2651
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)